Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2093 ATGATCAAGCTTCTCTTCCCTAAAAATGTCACTTTTATATCATCTTTTTGTTCCTCCTCGCCATCAGCTCGGCCTCTTCTCCTCCAAGTTAGTCACTTCTCAGTGTCGTCATATAATCATTCATTCTTGAGAGCCCGTGATGACGAAACACGAGATGATCGAAATGTACCAATTTCAGTGTGGTGGGAGTTCGATAGTTGTAATTTACCTGCTGATGTCAATGGTGGAAAAAATCCTGCTCATGGATCTGTTCTTGTTGATCTTATCCATTGGGTTTCTAAAAATCCTCCACCAGCACATCTGTTTTTGATTACTGATAACAGGGCTTTTGCTGATATGTTGCACCGTTTAAGATTGGATAACTACAATATCTTGCTTGCAGCACCGGCAAGGGCTCCTAATGTTCTCTGCAATGCAGCAACTATAATGTGGCATTGGAATTCATTAATTAGGGGGGAAAATCTTGATGGAAAGCACTTTAATCATCCTCCTGATGGTTTGGATGGTTCTTGGTATGGGCACCATAAGGTGACTCTTGAAGACCCTTTCTTGGATGGTGAGCAGTTACAGATTAAGGAGATATCTGCACCTATCTCAGATTTGGAATTACGTACAGTTCCAAAGGCTCTTGTGAGGCAAGTTCGAGAAATATTGAACTCATACCCAACAGGTATCTCTGTATCAGACCTTCGAGCAGAGATATCAAAAGCTGGTATTTTCTTGGATAAAAACTACTATGGTCATAAAAAGTTTACCCGCTTTCTTTTTTCAGTAGCAGATATACAACTTCGGCCTGGACCTGATAATTTACTTTTTGTTCATTCTATCCCCCAAAAATGTCCGGGACCCTTTGATAGCAGTTCTTTGTCATCAACATTATCTGATTGTGGTGAGGAGTTGAACCAGGTGGCTCCTTCAAAGTCAAGTGGTGAGGTCAAAAAAGTGGTGGGGGATGCAGATTTGAACCCATCAACAGTATCTGTTGATGTTGACATTAACCAACTGGCTACTTCAAAGTTAAGTGGTGAGGTGGAAAAGGCGTTTGGGGATGCAGAAGTGAAACCTTCAATGGATTCATCTCAGGTCCCAGAAAAGGTCCAACAGTTTGTGGATGTGGTTAATGCACATGCAACTGAGAGTCAATTGCCTCTGAAGGAGAATGAAATTTTTAGCTCTAGTGATGTAAGTCTGAGTGTCGCAGAGAAAAATACAACTTCAGAGAATTACTCTACTGAACAAAGCAAAACAGTTTCAGAGAAGAATGCCTCTTCAAATGAAATTTCTGGGGAGTTAAAAGCTGAGGACAAGTATGACAAATCCACAATAAAGGAATCTGATGCAGTTCGTCACATTTGTCATTCTATGCCAGTTGATGAATCCGTGACTGACAAAAGCATTGGTGAAAGCACTGAAACTAACAGCAAAAATTTTGGCAAACGTCGAAGTTTCTTTGCTTGGATTAGCAGCTGGTGGCCTTTCAGGAAAAATCATAGAAACTCAAATAATTTGACTGATCAACCGAATGAGATGCTCAGTAATACTGAAGAGCCCAAGGTTTCAAACCTGAACCAGGCAACCTGTCATTCTGAAGATTCTGATTCATCAGATCTGAAACAAACAGTTTCTCATTCTGAAGAGTCTGAGTTCACAAAACAGAAACAAACAGTTAGTCACTCTGAGGAGCCAAAGTTATCTGAACCGAGACAGAAAGTGAATTATTTTGTAGAGCCCAAGTTATTTTCTAGTGGCACCTTTTGGAGTGACATGGAATCTTTTGTTTTTTCTGCCAAAGGATCGACTCTAATCTCCCATTCTAAAAACAAGAAGGATCTGATGCAGAAAATTCAGAAGTATGGACCCCAGGCTCTTAGTTCTCTTAGTGAAAATGATCTCCTTCAACTGGGGAATATGTTGATATATAAGAAAAAATGGTTGGAGGAAAGGCCTTCTCTGACTTTTCCTTTCCTGGTCACTCTACAAGCTGGGAAGAACCCTGTGGGCCTATCGCTTGGTGCAACTGGCTTGAGATCTCTTTTTCTAAGCAAAGAAGCACAGAGCACCTTGCAAAAATCATCAGATGGTGATATCGATAAAAGATATCAGAGTGTTCCTCAAGCTGGAGTTTCTTCACCTGCCATTAAAAATAGGCACACTGAAAAGTCTAGAACTGACATATTAGCAGATATTCAGAAACTTGTGAGTGACATAGTGAGGGAACACTCAGATGGGTGTAATATGGGTATGATACCAAAACTTTTCCTGGAGAGGTATGGCTATCCTCTTGATGCTCAGAAGCTTGGTTATCAAAAGTTGGCAACCTTGTTACAGATTGTGCCTGGAGTGAGAGTAGAGTCTTCTTACATTTTTCCTGCTGGTCATCCCGCTTTTTCTACTGACATGGAAATTTCAACTCTCAATACTTCAGTGAACAATTCAAGTGGTGCAGTGTTGGATTCTGATCGAGAATCATCTGATTCATGCCATAAAGAAGATCGCAAAGACGCTGCATGGGAGGAATTAGGACCTGTCTCAGTTAGCAATCCCAAACAGAGCGACCTGGAAACAAAATCAAGGCAAAAGGCTTTAAAGCTGGAGGCCTCAATACGTCCTGATTATGAACCTTCAGTTTCTGATGATGATTCTTCTGAATCCGAAGGAGATAGCTCTTGTCTAACTCAATCAGAAGAGGAGGTACGGTCAAAACATAATGTGGAAGACAGTTCTCTTTTGCAAACTCTGGAGTCATTTTACAGAAGCCAAGAAGAGGGTAGTGTGCAGTCAGAAAACACTGACACCAAAAGCAATGGTCTAACTGGTGGTTTTAATCCATCCAGGAATTCCACTGCAGGAGTGCTTTCCAAAACTCATTCAGGGGCAATGCATATAGAGAAGCAAAAACCTCACAAGAGCTATTCATTTGTTGCTGACCCAGACTCACGAAAGAAGGACGAGCTGATCGATGGAATATTACAGAATTTGAGGAAGTCAGATGAGTTAAGGATGCGAGGTTGA 3012 0.411 MIKLLFPKNVTFISSFCSSSPSARPLLLQVSHFSVSSYNHSFLRARDDETRDDRNVPISVWWEFDSCNLPADVNGGKNPAHGSVLVDLIHWVSKNPPPAHLFLITDNRAFADMLHRLRLDNYNILLAAPARAPNVLCNAATIMWHWNSLIRGENLDGKHFNHPPDGLDGSWYGHHKVTLEDPFLDGEQLQIKEISAPISDLELRTVPKALVRQVREILNSYPTGISVSDLRAEISKAGIFLDKNYYGHKKFTRFLFSVADIQLRPGPDNLLFVHSIPQKCPGPFDSSSLSSTLSDCGEELNQVAPSKSSGEVKKVVGDADLNPSTVSVDVDINQLATSKLSGEVEKAFGDAEVKPSMDSSQVPEKVQQFVDVVNAHATESQLPLKENEIFSSSDVSLSVAEKNTTSENYSTEQSKTVSEKNASSNEISGELKAEDKYDKSTIKESDAVRHICHSMPVDESVTDKSIGESTETNSKNFGKRRSFFAWISSWWPFRKNHRNSNNLTDQPNEMLSNTEEPKVSNLNQATCHSEDSDSSDLKQTVSHSEESEFTKQKQTVSHSEEPKLSEPRQKVNYFVEPKLFSSGTFWSDMESFVFSAKGSTLISHSKNKKDLMQKIQKYGPQALSSLSENDLLQLGNMLIYKKKWLEERPSLTFPFLVTLQAGKNPVGLSLGATGLRSLFLSKEAQSTLQKSSDGDIDKRYQSVPQAGVSSPAIKNRHTEKSRTDILADIQKLVSDIVREHSDGCNMGMIPKLFLERYGYPLDAQKLGYQKLATLLQIVPGVRVESSYIFPAGHPAFSTDMEISTLNTSVNNSSGAVLDSDRESSDSCHKEDRKDAAWEELGPVSVSNPKQSDLETKSRQKALKLEASIRPDYEPSVSDDDSSESEGDSSCLTQSEEEVRSKHNVEDSSLLQTLESFYRSQEEGSVQSENTDTKSNGLTGGFNPSRNSTAGVLSKTHSGAMHIEKQKPHKSYSFVADPDSRKKDELIDGILQNLRKSDELRMRG 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2093 1003 MobiDBLite consensus disorder prediction 853 876 - -
Acco04g2093 1003 MobiDBLite consensus disorder prediction 959 976 - -
Acco04g2093 1003 MobiDBLite consensus disorder prediction 690 719 - -
Acco04g2093 1003 MobiDBLite consensus disorder prediction 497 566 - -
Acco04g2093 1003 Pfam NYN domain 74 140 IPR021139 GO:0004540
Acco04g2093 1003 MobiDBLite consensus disorder prediction 905 954 - -
Acco04g2093 1003 MobiDBLite consensus disorder prediction 497 530 - -
Acco04g2093 1003 ProSiteProfiles OST-type HTH domain profile. 206 277 IPR025605 -
Acco04g2093 1003 ProSiteProfiles OST-type HTH domain profile. 725 801 IPR025605 -
Acco04g2093 1003 MobiDBLite consensus disorder prediction 403 428 - -
Acco04g2093 1003 Gene3D - 720 787 IPR041966 -
Acco04g2093 1003 MobiDBLite consensus disorder prediction 810 976 - -
Acco04g2093 1003 MobiDBLite consensus disorder prediction 403 432 - -
Acco04g2093 1003 MobiDBLite consensus disorder prediction 531 566 - -
Acco04g2093 1003 Pfam OST-HTH/LOTUS domain 208 264 IPR025605 -
Acco04g2093 1003 Pfam OST-HTH/LOTUS domain 727 785 IPR025605 -
Acco04g2093 1003 CDD LOTUS 726 783 - -
Acco04g2093 1003 MobiDBLite consensus disorder prediction 821 838 - -
Acco04g2093 1003 PANTHER LIMKAIN B LKAP 81 731 IPR024768 GO:0005777|GO:0010468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2093 Acco-ChrAcco04 36774589 36778382 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2093 68 152 C2H2 Transcription Factor Family AT5G61190 43.529 1.69e-14 76.3