Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2082 ATGTGTTTCTTCTTAAAGGTGGCGAATCCTGCGAATAACTCTCACAATCACAACAACGTTGTTGATGAACACAACAAAGTTGTCTTCCCTGGTATGGATAGAGACAGAGAGATGTCTACTATAATCTCTGCTTTGACCCACGTCGTCGCGGGAGATATTCCCGGTGATTCTGCTGAGACTTCTGGCGGTGGCGGTGGCGGTGGCGGTGGAAGTGGAGGTGGAGGGGGCTCTGTTACATTAAGCTCGCCGTCGGATTTGACGACGCCGACTTCGTCTTCTTCGTCTTATGGTGGTAGCTCTGTTTTGAAGAGAAGTAGGGAAGATAATGTTAGAGGCTCTTCGTCTTCCACTGCTATTATCCAAACAGAAGGTTCAAGAGGGCAGAGTGTTCAAACGTATGAATATAGCTCTAACACAGAGAATGTGAGAGTTTCAGAAGAAGGAAGAAGAAAATACAGAGGAGTGAGACAGAGGCCATGGGGCAAGTGGGCAGCTGAAATCAGAGATCCTTTTAAAGCTGCCCGAGTTTGGTTGGGCACTTTCGACACGGCGGAGGCGGCTGCCCGGGCCTACGACGAAGCTGCCCTCCGTTTTAGAGGCAACAAGGCCAAGCTTAATTTCCCTGAAAATGTCAGACTCCGGCAACCACCTCCACCTCCACCTGCACCGCCTCCGATGACGACGACCCATTTGACAGATTCAGGTTCTGCAACTACCCTTTTGTCCATTCCGACGTCGGCTGAGGCGATTGTTCATTCGGAATCTCTTCACCACCATCACCACCACTCTCTCATGAGTCCTCAGCCGGCGGTGGCGACCGGTGATTTTTATGGCAACCCGCAGTTTTCGGAGTTCCCGATGAACTATTATGATCAGACTGTTATGTCATCCTCAATGGCTCATCATTTGCAGTCATCGGCATTGCCGTCAGCTTTGTCATCGTCGCCGTCTTCGACGTTGGCATCTTCCATTAGCTCTCAGCAAGGAGGTTTACCGTTTCCGGGTTGGGTCATACTGGAAACGGGCCAGGAAAGCAGGTCCGAATACTTACCATCAGCATGGTCATCAGCTTCGGGTCATAGTTCTTCTTCCTCTATATGA 1101 0.5041 MCFFLKVANPANNSHNHNNVVDEHNKVVFPGMDRDREMSTIISALTHVVAGDIPGDSAETSGGGGGGGGGSGGGGGSVTLSSPSDLTTPTSSSSSYGGSSVLKRSREDNVRGSSSSTAIIQTEGSRGQSVQTYEYSSNTENVRVSEEGRRKYRGVRQRPWGKWAAEIRDPFKAARVWLGTFDTAEAAARAYDEAALRFRGNKAKLNFPENVRLRQPPPPPPAPPPMTTTHLTDSGSATTLLSIPTSAEAIVHSESLHHHHHHSLMSPQPAVATGDFYGNPQFSEFPMNYYDQTVMSSSMAHHLQSSALPSALSSSPSSTLASSISSQQGGLPFPGWVILETGQESRSEYLPSAWSSASGHSSSSSI 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2082 366 ProSiteProfiles AP2/ERF domain profile. 151 208 IPR001471 GO:0003700|GO:0006355
Acco04g2082 366 MobiDBLite consensus disorder prediction 212 227 - -
Acco04g2082 366 Gene3D AP2/ERF domain 150 210 IPR036955 GO:0003700|GO:0006355
Acco04g2082 366 Pfam AP2 domain 151 200 IPR001471 GO:0003700|GO:0006355
Acco04g2082 366 PANTHER DNA-BINDING DOMAIN 114 296 IPR044808 GO:0003700|GO:0009873
Acco04g2082 366 MobiDBLite consensus disorder prediction 111 140 - -
Acco04g2082 366 CDD AP2 151 210 IPR001471 GO:0003700|GO:0006355
Acco04g2082 366 MobiDBLite consensus disorder prediction 210 234 - -
Acco04g2082 366 SUPERFAMILY DNA-binding domain 151 209 IPR016177 GO:0003677
Acco04g2082 366 MobiDBLite consensus disorder prediction 75 102 - -
Acco04g2082 366 MobiDBLite consensus disorder prediction 52 140 - -
Acco04g2082 366 PRINTS Ethylene responsive element binding protein signature 174 190 IPR001471 GO:0003700|GO:0006355
Acco04g2082 366 PRINTS Ethylene responsive element binding protein signature 152 163 IPR001471 GO:0003700|GO:0006355
Acco04g2082 366 SMART rav1_2 151 214 IPR001471 GO:0003700|GO:0006355
Acco04g2082 366 FunFam Ethylene-responsive transcription factor 2 150 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2082 Acco-ChrAcco04 36501975 36503467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2082 159 263 AP2-EREBP Transcription Factor Family AT5G64750 63.303 1.03e-35 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco04g2082 AP2 4.5e-15 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g2082 04 36501975 36503467 Acco04g2082 04 36501975 36503467 ECH