Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2071 ATGGTGTGTGAGCAACAGCTGTGTTCTCCCTTGGACTTAATAAATACCCTTCTTCTCTTCTTTCTTACGGCTTTTGACTCTCTCTCTCTCTCTCTCTCATTCTCTTGTCTCTGCACTGAACCAGAGCTCCAGAGCTCCCCCTCTAATGGCAGACCTTTTCCCATAAGAAACCCACCCAATCCATCTTCTTCTTCTTCTCTCCAACCCTCAGCCACAATGAAACCTCATAAGTCCCCCACTAGTTATCACTTCTCTTTCTTCATATTCTTCCCCCTTGCCGTTCTTTCTCTCCAATCTCCCTTTTCATCCTCTGCTTTTTCAGCCTTCCCAGATTCCCCTCAACCGTTGATCAACTTCAAGTCCTCTCTCTCAGACCAATCTCTGCTCCGAAACTGGCTCCCAAACCAAAACCCATGTTCTTTCACTGGGATTTCCTGCCAGCAAACCGGGTTTTATTCCATAGACCTCAGCTCCATCTCCTTGAACACAAACTTCAGTATCGTCTCTGTCAATCTTCTCACACTCGACCATCTGGAAGCTCTTAACCTCAAGCACACCAATCTTACTGGTACCATTTCTGTGCTTCCGCGTGCTTTCCAGTGTGGTGCCTCATTGAGCAGTTTAGATCTATCTCAGAACCAATTGTCTGGTTCTGTTTCGGACATATCCTATCTCAGCCCATGTTCAAGTTTGAAATCTCTTAACCTTTCTAATAATGATTTTGAGTTTTCCGCGAAAGATTCCACCGGCCTGAAACTCAATCTCCAAGTCCTGGATATTTCTTTCAATAATGATATTTCCGGTCCAAATGTTCTCCATTGGATCTTATCTCCAGGTTGCCACGATATGCAAGTGTTGGCTCTGAGAGGAAACAAGGTCTCCGGAGAAATCAATTTCGCAAGCTGCCAGAAATTGCAGCATTTGGACCTTTCTGCTAATAATTTTTCCGCCGCTATTCCTTCATTCGGTGAATGTTCGGCGTTAGAGTACCTTGATATCTCTGCTAACAAGTATTTCGGCGACATTGGCCTTGTTCTCTCTACCTGCAAGAAGCTTAGCCACCTTAACGTTTCAAGCAACCAGTTCACCGGTCCGGTTCCGTCGCTTCCGGTGGACTCTATGCAGTTCCTTTATCTCGCAGGCAACAAGTTTCATGGTAAGATTCCCGAACGACTGGCGGATTTTTGCACCACTATCGTCGAGCTCGATCTTTCCTCCAACTCCCTCACCGGTACGATTCCGCGCGGTCTTAGCGCCTGTTCTTCGCTGGAATTGTTTGATATATCTAAGAACCAGTTTTCCGGTGACTTACCGATTGAAATTTTCGTGGAGATGGGCAGCTTGAAGAAGCTAGTTCTCTCATTCAATAATTTCGACGGTAATTTGCCGGATAATCTGTCGAAGCTCACAAGCTTGGAATCGTTGGATTTGAGTTCCAATAACTTCTCGGGGCCAATACCTGGAGGGCTATGTCAAGATCCTAGGAACAATTTGAAAGAATTATTCCTGCAGAATAACGGGCTCACGGGTTTCATTCCCCCCACAATCAGCAACTGTTCTGAGCTTGTTTCATTGGATTTAAGTGTCAACTTCTTGAAGGGGACTATCCCTTCTAGCTTGGGGTCTCTTTCGAAGCTTCGTGGTTTGACTATGTGGCTAAACCAGCTTGAAGGTGAAATACCTCAAGAGCTCAGGTACATTAAGACCCTTGAGAATTTGCTCTTGGATTTTAATGAGCTCACAGGGAATATTCCTTCTGGTTTAAGAAACTGTACCTCCTTGAATTGGATCTCCTTGTCTAATAATAAATTGAGCGGGGAGATTCCTGCTTGGATTGGCCAGCTTTCCAATCTTGCAATCCTGAAGCTGAGCAATAACTCATTTTCTGGGAGGATTCCACCGGAACTTGGTGATTGTCGCAGTTTGATCTGGTTGGATCTAAATACAAATTCCCTTAATGGGTCAATTCCTCCTGAATTGTTCAAGCAATCTGGCAAAATCACTGTGGATTTCATAACCGGGAAAACTTATGTGTATATCAAGAATGATGGCAGCAAGGCATGCCATGGAGCTGGGAATTTACTAGAGTTTGCTGGGATCAAGTCTGAGCAGTTGAACAGAATTTCTACAAGGAATCCCTGTAACTTCACTAGAGTTTATCGTGGTAATCTCCAACCTACATTTAGTAATAATGGGTCTATGATTTTTTTGGATCTTTCATACAATATGTTGTCGGGTGGTATACCGAAAGAGATTGGGAACTTGTACTACGTAGATATTCTGAATTTGGGTCACAACAACCTAACTGGAAATATCCCAGAGGAGCTCGGGAAGGCAATAAAAATGGACATACTTTATCTCTCGTGGAATAGGCTTGAAGGACAAATTCCACAGTCCTTGACTGGCCTTTCCTTGCTCTCTGAAATTGATCTATCAAACAACCTTCTGTGGGGAGCGATTCCTGACTCTGCTCAGTTTGTAACCTTTTCTCCCAACAATTTTGCAAATAATTCTGATCTCTGCGGATACCCTCTTGCTCCATGTGGGGGGCACTTAGGATCGGGTTCAGATGCTCAACATCAGAAATCTCGCAGGAGGCAAGCATCTCTTGCTCTTAGTTTGGCTTTTGGATTGCTATTCTCCCTATTCTGCGTCATTGGTGCAATTATAATTTCCCTGGAGACCAGAAAGAGGAGGAAGAAGAAGGAAGCTGCACTAGATGCCTACATGGAAAACAATTCTCATTCAGGTACTGGCAACAATACAAACTGGAAGCTTTTGAGTGCCCATGAAGCACTCAGCATAAACCTTGCAGCATTTGAGAAGCCCATCCGGAAACTCACCTTTGGAGATCTCCTTGAAGCTACTAATGGCTTCGACAATGATAGTCTTATTGGTTCTGGAGGTTTTGGTGATGTCTACAAGGCTCAACTGAAGGATGGAATTGTTGTGGCTATCAAGAAACTGATACATAGTGGTCAAGGTGACAGGGAATTCACAGCTGAAATGGAAACCATTGGCAAAATCAAGCATCGCAACCTAGTGTCCCTTCTGGGTTACTGCAAGGTAGGGGAAGAGAGACTCCTGGTTTACGAATTCATGAAATACGGAAGTCTAGAAGACGTTTTGCACGACCGGAAGAAGGCCAGGGTCAAGCTGAACTGGGCTGTGAGAAGGAAAATCGCCATTGGGGCTGCTAGAGGATTGGCTTTTCTTCACCATAATTGCATCCCACACATCATTCATAGAGACATGAAGTCCAGTAATGTATTGCTGGATGAGAATTTGGATTCCAGAGTCTCTGATTTCGGTATGGCTAGGCTTATGAGTGCTTTGGATACCCATTTAAGTGTCAGCACACTAGCAGGCACCCCTGGCTATGTTCCTCCTGAATATTATCAGAGCTTTAGATGCTCCACCAAAGGGGATGTATATAGTTATGGTGTAGTTTTACTGGAGCTGCTAACAGGGAGACGCCCAACGGATTCAGCGGATTTTGGCGACGACAATAATCTCGTGGGATGGGTTAAACAACATGTGAAACTGAGGGTGAATGAAGTTTTTGATCCAGAGCTCTTGAAAGAGGATCCTAGTCTTGAGAATGAGCTTCAACAACACTTGAAAGTTGCTTGTGCTTGTTTGGATGATCGACCATGGCGGCGTCCCACAATGATTCAAGTCATGGCAATGTTCAAGGAAATCCAAGCTGGGTCTGGCATTGATTCCCAATCCACCATAGACACTGAAGATGGAGATTTTAGTTCAGTTGGAATGGTAGATATGAGCATTAAAGAAGCCCCCTGA 3804 0.4445 MVCEQQLCSPLDLINTLLLFFLTAFDSLSLSLSFSCLCTEPELQSSPSNGRPFPIRNPPNPSSSSSLQPSATMKPHKSPTSYHFSFFIFFPLAVLSLQSPFSSSAFSAFPDSPQPLINFKSSLSDQSLLRNWLPNQNPCSFTGISCQQTGFYSIDLSSISLNTNFSIVSVNLLTLDHLEALNLKHTNLTGTISVLPRAFQCGASLSSLDLSQNQLSGSVSDISYLSPCSSLKSLNLSNNDFEFSAKDSTGLKLNLQVLDISFNNDISGPNVLHWILSPGCHDMQVLALRGNKVSGEINFASCQKLQHLDLSANNFSAAIPSFGECSALEYLDISANKYFGDIGLVLSTCKKLSHLNVSSNQFTGPVPSLPVDSMQFLYLAGNKFHGKIPERLADFCTTIVELDLSSNSLTGTIPRGLSACSSLELFDISKNQFSGDLPIEIFVEMGSLKKLVLSFNNFDGNLPDNLSKLTSLESLDLSSNNFSGPIPGGLCQDPRNNLKELFLQNNGLTGFIPPTISNCSELVSLDLSVNFLKGTIPSSLGSLSKLRGLTMWLNQLEGEIPQELRYIKTLENLLLDFNELTGNIPSGLRNCTSLNWISLSNNKLSGEIPAWIGQLSNLAILKLSNNSFSGRIPPELGDCRSLIWLDLNTNSLNGSIPPELFKQSGKITVDFITGKTYVYIKNDGSKACHGAGNLLEFAGIKSEQLNRISTRNPCNFTRVYRGNLQPTFSNNGSMIFLDLSYNMLSGGIPKEIGNLYYVDILNLGHNNLTGNIPEELGKAIKMDILYLSWNRLEGQIPQSLTGLSLLSEIDLSNNLLWGAIPDSAQFVTFSPNNFANNSDLCGYPLAPCGGHLGSGSDAQHQKSRRRQASLALSLAFGLLFSLFCVIGAIIISLETRKRRKKKEAALDAYMENNSHSGTGNNTNWKLLSAHEALSINLAAFEKPIRKLTFGDLLEATNGFDNDSLIGSGGFGDVYKAQLKDGIVVAIKKLIHSGQGDREFTAEMETIGKIKHRNLVSLLGYCKVGEERLLVYEFMKYGSLEDVLHDRKKARVKLNWAVRRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDENLDSRVSDFGMARLMSALDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGRRPTDSADFGDDNNLVGWVKQHVKLRVNEVFDPELLKEDPSLENELQQHLKVACACLDDRPWRRPTMIQVMAMFKEIQAGSGIDSQSTIDTEDGDFSSVGMVDMSIKEAP 1267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2071 1267 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 279 494 - -
Acco04g2071 1267 SUPERFAMILY L domain-like 118 368 - -
Acco04g2071 1267 ProSitePatterns Protein kinases ATP-binding region signature. 965 988 IPR017441 GO:0005524
Acco04g2071 1267 Pfam Brassinosteroid receptor island domain 665 729 IPR045381 -
Acco04g2071 1267 Pfam Leucine Rich repeat 469 484 IPR001611 GO:0005515
Acco04g2071 1267 Gene3D Transferase(Phosphotransferase) domain 1 1034 1236 - -
Acco04g2071 1267 SUPERFAMILY L domain-like 280 661 - -
Acco04g2071 1267 SMART LRR_typ_2 469 493 IPR003591 -
Acco04g2071 1267 SMART LRR_typ_2 445 468 IPR003591 -
Acco04g2071 1267 SMART LRR_typ_2 640 663 IPR003591 -
Acco04g2071 1267 SMART LRR_typ_2 615 639 IPR003591 -
Acco04g2071 1267 SMART LRR_typ_2 497 519 IPR003591 -
Acco04g2071 1267 SMART LRR_typ_2 175 201 IPR003591 -
Acco04g2071 1267 SMART LRR_typ_2 803 826 IPR003591 -
Acco04g2071 1267 ProSiteProfiles Leucine-rich repeat profile. 204 226 IPR001611 GO:0005515
Acco04g2071 1267 Pfam Leucine rich repeat N-terminal domain 116 146 IPR013210 -
Acco04g2071 1267 MobiDBLite consensus disorder prediction 60 74 - -
Acco04g2071 1267 FunFam Brassinosteroid LRR receptor kinase 1034 1236 - -
Acco04g2071 1267 SUPERFAMILY Protein kinase-like (PK-like) 941 1231 IPR011009 -
Acco04g2071 1267 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 495 671 - -
Acco04g2071 1267 Pfam Protein kinase domain 961 1229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g2071 1267 PANTHER RECEPTOR-LIKE PROTEIN 55 119 368 - -
Acco04g2071 1267 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 726 848 - -
Acco04g2071 1267 Gene3D - 670 730 - -
Acco04g2071 1267 PRINTS Leucine-rich repeat signature 469 482 - -
Acco04g2071 1267 PRINTS Leucine-rich repeat signature 205 218 - -
Acco04g2071 1267 Pfam Leucine Rich Repeat 497 519 IPR001611 GO:0005515
Acco04g2071 1267 Gene3D Phosphorylase Kinase; domain 1 920 1033 - -
Acco04g2071 1267 SUPERFAMILY L domain-like 723 845 - -
Acco04g2071 1267 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1080 1092 IPR008271 GO:0004672|GO:0006468
Acco04g2071 1267 ProSiteProfiles Protein kinase domain profile. 959 1234 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g2071 1267 MobiDBLite consensus disorder prediction 43 74 - -
Acco04g2071 1267 FunFam Serine/threonine-protein kinase BRI1-like 1 672 729 - -
Acco04g2071 1267 CDD STKc_IRAK 965 1234 - -
Acco04g2071 1267 SMART serkin_6 959 1231 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g2071 1267 FunFam serine/threonine-protein kinase BRI1-like 2 920 1033 - -
Acco04g2071 1267 Gene3D Ribonuclease Inhibitor 116 848 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2071 Acco-ChrAcco04 36346190 36349993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2071 116 1267 Receptor kinase-like Gene Family AT4G39400 68.131 0.0 1509
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Acco04g2071 Pkinase 1.4e-45 CL0016