Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2051 ATGGACTTGACGGCGAAGCTTCATCACCTTGAGCTCGGTTCAAGCTTCCTCAACGGCACGGTCATTTTGGACACACGAAAAGCCGTTGTACGACATTACATTCGGCCTGCTTCAAATCGGGTTGTTTCTCAAACCCTTAGAAGTAATACTAGTTTAGTTAAATCCACTCAATTTATTGGTCCTAGAAGAGCGAATTTGAGTATCGCTGCTAGTTCATCTGCGGTTGCCGTCGAGTCATCGGCGGCAGAATCCACTACGGAAGAGGACATTGAGTCTTTGTTTTTGGACTCTTCGGTTGATGAATATGAGAATAAACGTGCGAATAAGCAATCCAGTACCGGTGCGTCGAGCATTTCATCTGGTGTGAGGTTAGAGAATGTGAGCAAAAGCTACAAGGGCGTCACTGTCTTGAAAGATGTTAGTTGGGAAGTGAAAAAAGGTGAAAAAGTGGGATTGGTTGGTGTGAATGGTGCAGGTAAGACGACACAGATGAGAATTATTGCTGGTCAGGAGGAGCCAGATTCGGGGAATGTAATAAAAGCCAAACCAAATATGAAAATTGCTTTTCTGAGTCAGGAATTTGAGGTATCTCTGAGTAGGACCGTGAGGGAGGAATTTCTAAGTGCATTTAAGGAGGAGATGGGGATAGCAGGTAAGTTGGAGAAGGTACAAAAGGCACTCGAGGGTGCTGTGAACGATTTGGAATTGATGGGGAGGCTTTTAGATGAGTTTGATTTGCTTCAGAAGAAGGCCCAGGCAGTGAACTTGGACGCAGTAGATGCGAAGGTGAGCAAATTGATGCCAGAACTTGGGTTTTCTTCAGATGATTCAGACAGGCTGGTGGCGTCATTTAGCAGTGGATGGCAGATGAGGATGTCCCTGGGAAAGATTTTACTTCAGGAGCCAGATTTATTACTGTTGGATGAACCGACAAATCACCTTGACCTTGACACCATTGAGTGGCTTGAAGGGTATCTTAACAAGCAAGAAGTGCCTATGGTCATCATTTCCCATGACAGAGCTTTTCTTGATCAACTGTGTACAAAAATTGTGGAAACTGACATGGGTGTATCCAGAACATATGAGGGCAATTATTCCCAGTATGTAGTTTCAAAGGAGACATGGATTGAAGCACAGTATGCTGCATGGGAGAAGCAGCAGAAAGAAATTGAGCAGACGAAGGACTTAATAAACCGGTTAGGTGCAGGAGCAAATTCTGGCCGTGCTTCATCTGCTGAGAAGAAGTTGGAGAGACTTGAAGAAGAGGAACTAGTAGAGAAGCCATTTCAACGGAAACAAATGAAAATCAGGTTCCCTGAGCGTGGAAGAAGTGGAAGATCCATTGTAACAATTAAGAACATGGAATTTGGCTTTGAGGATGAAGTTCTTTTCAAGAAGGCAAATCTTACAATTGAAAGGGGAGAAAAAATTGCCATTATTGGTCCAAATGGATGTGGCAAGAGTACTTTGCTGAAGCTCATAATGGGTTTAGAGAAGCCAAATGGGGGTGAAGTTGTGCTTGGGGAGCACAATGTATTGCCAAACTATTTTGAGCAAAATCAGGCTGAGGCACTTGATCTGGAGAAGACAGTGCTTGAGACAATAGAAGAAGCTGCTGAGGACTGGAAGATTGATGATATTAAAGGACTTCTTGGGCGTTGTAATTTCAAATCTGATATGCTTGACCGTAAAGTTTCCCTATTGAGTGGTGGTGAGAAGGCACGCCTGGCTTTTTGCAAATTTATGGTAACACCGTCAACTCTGCTTGTGTTGGATGAACCAACCAATCACTTGGATATACCTTCTAAAGAAATGCTTGAGGAGGCAATAAATGAGTACCAGGGCACTGTTATTACAGTGTCTCATGATCGATACTTCATAAAGCAGATAGTTAATAGAGTCATAGAAATTAAAGATGGAACTATACAGGATTATGCTGGCGACTATAATTATTATTTAGAAAAGAATCTTGATGCTAGAGCTAGAGAGCTTGAACGTGCGGCTGAGCTTGACGAGAAAGCTCCGAAAGTGAAAGCCAAATCCAAGATGTCAAAGGCTGAGAAAGAAGCACGGAAGAAACAGAAGAGTCAAGCTTTTCAGGCAGCAAAGCAGAAATCTAAAGCGTTAAAAAATGCCAAGAGGTGGAATTGA 2151 0.4296 MDLTAKLHHLELGSSFLNGTVILDTRKAVVRHYIRPASNRVVSQTLRSNTSLVKSTQFIGPRRANLSIAASSSAVAVESSAAESTTEEDIESLFLDSSVDEYENKRANKQSSTGASSISSGVRLENVSKSYKGVTVLKDVSWEVKKGEKVGLVGVNGAGKTTQMRIIAGQEEPDSGNVIKAKPNMKIAFLSQEFEVSLSRTVREEFLSAFKEEMGIAGKLEKVQKALEGAVNDLELMGRLLDEFDLLQKKAQAVNLDAVDAKVSKLMPELGFSSDDSDRLVASFSSGWQMRMSLGKILLQEPDLLLLDEPTNHLDLDTIEWLEGYLNKQEVPMVIISHDRAFLDQLCTKIVETDMGVSRTYEGNYSQYVVSKETWIEAQYAAWEKQQKEIEQTKDLINRLGAGANSGRASSAEKKLERLEEEELVEKPFQRKQMKIRFPERGRSGRSIVTIKNMEFGFEDEVLFKKANLTIERGEKIAIIGPNGCGKSTLLKLIMGLEKPNGGEVVLGEHNVLPNYFEQNQAEALDLEKTVLETIEEAAEDWKIDDIKGLLGRCNFKSDMLDRKVSLLSGGEKARLAFCKFMVTPSTLLVLDEPTNHLDIPSKEMLEEAINEYQGTVITVSHDRYFIKQIVNRVIEIKDGTIQDYAGDYNYYLEKNLDARARELERAAELDEKAPKVKAKSKMSKAEKEARKKQKSQAFQAAKQKSKALKNAKRWN 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2051 716 Gene3D - 411 680 IPR027417 -
Acco04g2051 716 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 449 664 IPR003439 GO:0005524
Acco04g2051 716 Pfam ABC transporter 351 438 IPR032781 -
Acco04g2051 716 FunFam ABC transporter ATP-binding protein 409 676 - -
Acco04g2051 716 Coils Coil 676 705 - -
Acco04g2051 716 Gene3D - 119 404 IPR027417 -
Acco04g2051 716 MobiDBLite consensus disorder prediction 670 716 - -
Acco04g2051 716 MobiDBLite consensus disorder prediction 670 696 - -
Acco04g2051 716 Coils Coil 402 422 - -
Acco04g2051 716 FunFam Putative ABC transporter ATP-binding component 123 407 - -
Acco04g2051 716 CDD ABCF_EF-3 449 641 - -
Acco04g2051 716 Coils Coil 654 674 - -
Acco04g2051 716 Pfam ABC transporter 465 596 IPR003439 GO:0005524
Acco04g2051 716 ProSitePatterns ABC transporters family signature. 284 298 IPR017871 GO:0005524|GO:0016887
Acco04g2051 716 PANTHER ABC TRANSPORTER ATP-BINDING SUBUNIT 121 708 - -
Acco04g2051 716 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 429 656 IPR027417 -
Acco04g2051 716 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 122 380 IPR003439 GO:0005524
Acco04g2051 716 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 120 376 IPR027417 -
Acco04g2051 716 Pfam ABC transporter 137 312 IPR003439 GO:0005524
Acco04g2051 716 SMART AAA_5 473 641 IPR003593 GO:0016887
Acco04g2051 716 SMART AAA_5 146 356 IPR003593 GO:0016887
Acco04g2051 716 CDD ABCF_EF-3 122 352 - -
Acco04g2051 716 ProSitePatterns ABC transporters family signature. 568 582 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2051 Acco-ChrAcco04 35989576 35996423 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2051 446 666 Calmodulin-binding Proteins AT2G36910 26.316 1.82e-13 72.4