Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2025 ATGAATTCTCCATCCACACAGTTTGTTTCCTCAAGGAGGATGGGTGTTTATGATCCAATCCAACAGATTAATATGTGGGAAGAACATTTCAAAAGCAATGGTAATTTAAGTGCCTTAATTTGTGAAGCCGATGGGAAGTTAATTAATCAGCCAGAGGATGCTTCTCATAACACATTGGGTACGTCCAAGATGTATGGCCAAGAAGCTAATAGACCTACTGATAAGATACAAAGACGTCTTGCACAAAATCGGGAGGCTGCTCGTAAGAGTCGTCTGCGGAAAAAGGCCTATGTGCAGCAATTAGAATCAAGTCGTTTGAAGCTGATCCAGATAGAGCAAGAGCTCAACCATGCGAGACAACAGGGTTTATATATGGGCGGGGCATTGGACTCGAATAATATGGGTTTTCCTGGAACTGTTAATTCAGGTATTACGACCTTTGAGATGGAATATGGACACTGGGTTGAAGAGCAAAATAGACAAATCTGTGAACTAAGAGGTGCTTTAAATGCTCATATTAGTGACATGGAGCTCAGGATTCTTGTAGATAGTATAATGAATCACTATTTTGAACTCTATCGAAAGAAGTCTGCTGCTGCAAAAGTGGATGTTTTCTATGTGATGTTTGGTATGTGGAAGACTACAGCTGAGCGTTTTTTCATGTGGATTGGAGGCTTTCGCCCCTCTAAGCTTTTAAAGGTCATTGTCCCTCTGATTGAACCCTTGACTGAGCAACAACGGTTTGATATCTCTAACCTCGAACAATCTTGCCAGCAAGCAGAAGATGCCCTTTCTCAAGGTATGGATAAACTCCAGCAAACACTTGGCGATACTATAGCAGCGGGACCTCTAGTTGAAGGAACTTATATTCCTCAGATGGCTGCTGCAATGGAGAAAATGGAAGCTCTCGTGAGCTTTGTAAACCAGGCTGATCATCTTCGTCAGGAAACATTGCAGCAGATGTTTCGGATCCTAACAATCCGTCAGGCTGCTCGATACCTGCTTACTCTAGGCGAATACTTCCAACGCCTACGATCCTTGAGCTCACTTTTAGCTAATCGTCCTCGGGAACCAGCTTAA 1080 0.4296 MNSPSTQFVSSRRMGVYDPIQQINMWEEHFKSNGNLSALICEADGKLINQPEDASHNTLGTSKMYGQEANRPTDKIQRRLAQNREAARKSRLRKKAYVQQLESSRLKLIQIEQELNHARQQGLYMGGALDSNNMGFPGTVNSGITTFEMEYGHWVEEQNRQICELRGALNAHISDMELRILVDSIMNHYFELYRKKSAAAKVDVFYVMFGMWKTTAERFFMWIGGFRPSKLLKVIVPLIEPLTEQQRFDISNLEQSCQQAEDALSQGMDKLQQTLGDTIAAGPLVEGTYIPQMAAAMEKMEALVSFVNQADHLRQETLQQMFRILTIRQAARYLLTLGEYFQRLRSLSSLLANRPREPA 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2025 359 Coils Coil 250 270 - -
Acco04g2025 359 FunFam BZIP family transcription factor 74 123 - -
Acco04g2025 359 Gene3D - 74 123 - -
Acco04g2025 359 Coils Coil 94 121 - -
Acco04g2025 359 SUPERFAMILY Leucine zipper domain 75 114 IPR046347 GO:0003700|GO:0006355
Acco04g2025 359 Pfam bZIP transcription factor 74 103 IPR004827 GO:0003700|GO:0006355
Acco04g2025 359 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 78 93 IPR004827 GO:0003700|GO:0006355
Acco04g2025 359 PANTHER TRANSCRIPTION FACTOR TGA9 1 357 - -
Acco04g2025 359 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 73 115 IPR004827 GO:0003700|GO:0006355
Acco04g2025 359 Pfam Seed dormancy control 161 236 IPR025422 GO:0006351|GO:0043565
Acco04g2025 359 ProSiteProfiles DOG1 domain profile. 144 354 IPR025422 GO:0006351|GO:0043565
Acco04g2025 359 SMART brlzneu 71 131 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2025 Acco-ChrAcco04 35537219 35542549 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2025 1 359 Calmodulin-binding Proteins AT5G10030 67.033 3.45e-180 502
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Acco04g2025 DOG1 9.7e-31 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g2025 04 35537219 35542549 Acco04g2025 04 35537219 35542549 CCT
Acco04g2025 04 35537219 35542549 Acco04g2025 04 35537219 35542549 ECH