Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Acco04g2025 | ATGAATTCTCCATCCACACAGTTTGTTTCCTCAAGGAGGATGGGTGTTTATGATCCAATCCAACAGATTAATATGTGGGAAGAACATTTCAAAAGCAATGGTAATTTAAGTGCCTTAATTTGTGAAGCCGATGGGAAGTTAATTAATCAGCCAGAGGATGCTTCTCATAACACATTGGGTACGTCCAAGATGTATGGCCAAGAAGCTAATAGACCTACTGATAAGATACAAAGACGTCTTGCACAAAATCGGGAGGCTGCTCGTAAGAGTCGTCTGCGGAAAAAGGCCTATGTGCAGCAATTAGAATCAAGTCGTTTGAAGCTGATCCAGATAGAGCAAGAGCTCAACCATGCGAGACAACAGGGTTTATATATGGGCGGGGCATTGGACTCGAATAATATGGGTTTTCCTGGAACTGTTAATTCAGGTATTACGACCTTTGAGATGGAATATGGACACTGGGTTGAAGAGCAAAATAGACAAATCTGTGAACTAAGAGGTGCTTTAAATGCTCATATTAGTGACATGGAGCTCAGGATTCTTGTAGATAGTATAATGAATCACTATTTTGAACTCTATCGAAAGAAGTCTGCTGCTGCAAAAGTGGATGTTTTCTATGTGATGTTTGGTATGTGGAAGACTACAGCTGAGCGTTTTTTCATGTGGATTGGAGGCTTTCGCCCCTCTAAGCTTTTAAAGGTCATTGTCCCTCTGATTGAACCCTTGACTGAGCAACAACGGTTTGATATCTCTAACCTCGAACAATCTTGCCAGCAAGCAGAAGATGCCCTTTCTCAAGGTATGGATAAACTCCAGCAAACACTTGGCGATACTATAGCAGCGGGACCTCTAGTTGAAGGAACTTATATTCCTCAGATGGCTGCTGCAATGGAGAAAATGGAAGCTCTCGTGAGCTTTGTAAACCAGGCTGATCATCTTCGTCAGGAAACATTGCAGCAGATGTTTCGGATCCTAACAATCCGTCAGGCTGCTCGATACCTGCTTACTCTAGGCGAATACTTCCAACGCCTACGATCCTTGAGCTCACTTTTAGCTAATCGTCCTCGGGAACCAGCTTAA | 1080 | 0.4296 | MNSPSTQFVSSRRMGVYDPIQQINMWEEHFKSNGNLSALICEADGKLINQPEDASHNTLGTSKMYGQEANRPTDKIQRRLAQNREAARKSRLRKKAYVQQLESSRLKLIQIEQELNHARQQGLYMGGALDSNNMGFPGTVNSGITTFEMEYGHWVEEQNRQICELRGALNAHISDMELRILVDSIMNHYFELYRKKSAAAKVDVFYVMFGMWKTTAERFFMWIGGFRPSKLLKVIVPLIEPLTEQQRFDISNLEQSCQQAEDALSQGMDKLQQTLGDTIAAGPLVEGTYIPQMAAAMEKMEALVSFVNQADHLRQETLQQMFRILTIRQAARYLLTLGEYFQRLRSLSSLLANRPREPA | 359 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Acco04g2025 | 359 | Coils | Coil | 250 | 270 | - | - | |
Acco04g2025 | 359 | FunFam | BZIP family transcription factor | 74 | 123 | - | - | |
Acco04g2025 | 359 | Gene3D | - | 74 | 123 | - | - | |
Acco04g2025 | 359 | Coils | Coil | 94 | 121 | - | - | |
Acco04g2025 | 359 | SUPERFAMILY | Leucine zipper domain | 75 | 114 | IPR046347 | GO:0003700|GO:0006355 | |
Acco04g2025 | 359 | Pfam | bZIP transcription factor | 74 | 103 | IPR004827 | GO:0003700|GO:0006355 | |
Acco04g2025 | 359 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 78 | 93 | IPR004827 | GO:0003700|GO:0006355 | |
Acco04g2025 | 359 | PANTHER | TRANSCRIPTION FACTOR TGA9 | 1 | 357 | - | - | |
Acco04g2025 | 359 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 73 | 115 | IPR004827 | GO:0003700|GO:0006355 | |
Acco04g2025 | 359 | Pfam | Seed dormancy control | 161 | 236 | IPR025422 | GO:0006351|GO:0043565 | |
Acco04g2025 | 359 | ProSiteProfiles | DOG1 domain profile. | 144 | 354 | IPR025422 | GO:0006351|GO:0043565 | |
Acco04g2025 | 359 | SMART | brlzneu | 71 | 131 | IPR004827 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Acco04g2025 | Acco-ChrAcco04 | 35537219 | 35542549 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Acco04g2025 | 1 | 359 | Calmodulin-binding Proteins | AT5G10030 | 67.033 | 3.45e-180 | 502 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bZIP | Acco04g2025 | DOG1 | 9.7e-31 | No_clan |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Acco04g2025 | 04 | 35537219 | 35542549 | Acco04g2025 | 04 | 35537219 | 35542549 | CCT | |
Acco04g2025 | 04 | 35537219 | 35542549 | Acco04g2025 | 04 | 35537219 | 35542549 | ECH |