Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2022 ATGGGTGAGTCAAATCAGGCCAGTGATTGTTTTGTTATAAAATATCATATTGCGTTTAGGAATTTCTTACCAGAAGCCATGATGGCTCTCTCTGAGATCTTCTCTCAACTTTGCACCAAGGCCGTAGTCCTGTTGGCTCTGCTTCTAATACAACTCATGCTTCTTATAAAGAAGCTCAGGTCAGATACACGTCCAATTACTACCACCCAATATCTCAAACTCATCGAACAGAAGAACCCCACAATTTGTTTCACCAAGAGATTGAGGCAAGAAGGTGCAGAGTGCAGGGTGTGCTTATCTGAATTCCTAGAAGGGGAAAAGGTGAGGAGCTTGAAATGTAAACACACATTTCACAGAGATTGCTTGGACAAGTGGTTGCAGCAATATTTGGCTACCTGCCCTCTTTGCAGGAACCAAGTGCTGCCAGATGATATTGTGGCCAAGTATCGGGAGCTTCAGAATCAGGTAGAATCTGATGGGAATGATGAGCAGATTATGTTCTTGTTATCCGCGTTACATGGAGGAAGTTCTTTGCACAGATTTCTTTAG 549 0.4299 MGESNQASDCFVIKYHIAFRNFLPEAMMALSEIFSQLCTKAVVLLALLLIQLMLLIKKLRSDTRPITTTQYLKLIEQKNPTICFTKRLRQEGAECRVCLSEFLEGEKVRSLKCKHTFHRDCLDKWLQQYLATCPLCRNQVLPDDIVAKYRELQNQVESDGNDEQIMFLLSALHGGSSLHRFL 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2022 182 SUPERFAMILY RING/U-box 76 143 - -
Acco04g2022 182 PANTHER - 27 177 - -
Acco04g2022 182 SMART ring_2 95 136 IPR001841 -
Acco04g2022 182 ProSiteProfiles Zinc finger RING-type profile. 95 137 IPR001841 -
Acco04g2022 182 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 57 142 IPR013083 -
Acco04g2022 182 Pfam Ring finger domain 94 137 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2022 Acco-ChrAcco04 35473996 35475265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2022 93 148 C3H Transcription Factor Family AT1G15100 53.571 5.50e-18 75.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g2022 04 35473996 35475265 Acco04g2022 04 35473996 35475265 CCT
Acco04g2022 04 35473996 35475265 Acco04g2022 04 35473996 35475265 ECH