Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g2002 ATGGAATCGACTAAGTGGAGGATCATCAACCGACAAAATCGATCGGGGATTCACCGTTGCCGTTGCTGGCGAAGAACCATCCCGTCGTCTTTAGTGGAAGACCGTCACTGCCATTGCAGTGGAGGGCCATTGCCACCAGTTGTTCGGGGGAAAGGGTGGGGATTAGGGAAGGAAATAACCCAAGGAGGGAACTCAATTCCAAGGGGGTCGGGTAAGAATGAACTGAATATGACGACTACACTTGCTTGGAGGTCTGGTTCCAACAATGGTAGCAGCCTTGCTGCTAATGATATGGAAAAAAATGGCGAGGGGAACATACCAGAGTCAGAGCCCCCAACTCCGCATTCTGTTTTGAAGATGGGATTGAGAGACCGCAGCAGCAGCATGGAGGATCCAGATGGAACATTAGCAAGTGTTGCCCAATGCATTGAGCAGCTGCGACAAAGCTCATCCTCTGCAGAAGAGAAGGAGTACTCCTTGAGGCAGTTACTGGAGCTTATTGATATGCGTGAGAATGCGTTTAGCGCTGTTGGATCTCATTCTCAGGCAGTACCAGTGCTTGTTTCTCTTCTCCGATCTGGTTCATTGAGTGTGAAAATTCAGGCAGCGACTGTTCTAGGCTCCCTCTGTAAAGAAAATGAGCTAAGAGTGAAAGTCTTGCTTGGAGGATGCATTCCCCCATTGCTTGGGCTACTTAAATCCAGTTCAGCCGAAGGGCAAGTTGCTGCTGCCAAGACTATTCATGCTGTCTCTCAAGGTGGTTCTAAAGACCATGTTGGATCAAAAATATTTTCAACTGAAGGAGTAGTACCTGTGCTGTGGGAGCAGCTTCAGAAGGGGTTGAAGACTGGAAATGTAGTTGATGGTTTATTGACCGGAGCCTTGAAAAATCTATCCAGTAATACTGAGGGATTCTGGAATGCAACAATACAAGCTGGAGGAGTGGACATATTAATGAAGTTATTGACAACAGGGCATCCCAACACCTTAGCTAATGTGTGCTTCTTACTTGCCAGTGTGATGATGGAGGATGCATCCGTTTGTTCAAAGGTGTTGACTTCTGAGGCAACAAAACAACTCCTGAAATTATTAGGCCCTGGTAATGATGCCCCTATTAGAGCTGAAGCAGCTGGTGCTCTGAAATCTCTGTCTTCTCAGTGCAAAGAAGCAAGGCGTGAGATATCTAATTCTAATGGCATTCCTGCTTTGATCAATGCTACCATAGCTCCTTCGAAAGAGTTCATGCAGGGTGAGCATGCTCAAGCATTGCAGGAAAGTGCTATGTGTGCTCTAGCAAACATCTCTGGTGGTTTGTCTTATGTCATCTCTAGCCTTGGTCAAAGCCTTGAATCATGCACCTCAGCTACTCAAATTGCTGATACATTGGGGGCTTTAGCTTCAGCTCTTATGATATATGATAACGAGGCTGAAGCTACAAGAACATCGGATCCGTTGGTAGTTGAGCAAACATTGCTCAAGCAACTCAAATCTCAATCGCCTTTTCTTGTGAAGGAACGAACCATTGAAGCCCTGGCTAGTTTGTATGGAAATCCTTTACTGTCAATTAAACTTGCAAATTCAGATGCAAAACATTTGCTAGTCGGATTAATAACGATGGCTGTTAATGAAGTGCAAGATGACCTTATAAGAGCTCTCCTCACATTGTGCAACAATGAAGGCAGTCTTTGGCGTGCCCTTCAGGGCCGTGAAGGAGTTCAGCTGCTGATATCTCTTCTGGGGCTTTCATCAGAACAACAGCAAGAATGTGCGGTTGCTCTGCTATGCCTTCTATCTAATGAAAATGATGAAAGTAAATGGGCCATTACTGCAGCTGGTGGTATACCTCCATTAGTTCAAATTTTGGAGACAGGATCCACAAAAGCAAAAGAAGACTCGGCAAAGATCCTTACAAACCTGTGCAATCACAGTGAAGATATTCGTGCTTGTGTGGAGAGTGCTAATGCTGTTCCTGCGTTGTTGTGGCTATTGAAGAATGGAAGCCCTAATGGGAAGGAGATAGCAGCAAAAACCTTAAACCACTTAATTCATAAATCTGATACTACCACAATCAGTCAGCTTACAGCATTATTGACAAGTGATCTACCTGAATCTAAGGTCTATGTCTTAGATGCTTTGAAAAGTATGCTGTCAGTTGCCCCTCTTAGTGACATTCAACGAGAAGGCAGTGCTGCAAGTGATGCAATAGAGACAATGATAAAATTAATGAGCTCTACCAAAGAGGAAACTCAGGCTAAGGCGGCATCTGCTCTAGCAGGCATCTTTGAAATGAGGAAAGATGTGCGTGAAAGCAGCGTTGCTGTTAAAGCTCTCATGTCAGCCATGAGGTTGCTTAATATTGAATCTGAAAGCATCCTAATAGAGTCTTCTCACTGCCTTGCGGCAATATTTCTTTCCATCAAAGAGAACAGGGATGTAGCTGCTGTTGCTAGAGATGCATTACTCCCCTTAGTTTCACTAGCAAATTCTTCTGATTTTGATGTTGCAGAGTTGGCAACATGTGCGGTGGCTAATCTTATTTTAGATAGAGAGATGTCAGAGAGAGCTGTTGCTGAAGAAGTTATCTTGCCTGCTACCAGAGTATTACGTGAAGGCACAATTTCTGGAAAAACCCATGCTGCAGCAGCAATTGCTCGGCTCATACATTATCGGCAAGTTGATTATTCTATAATTGAATGTGTGAATCGTGCTGGGACTGTACTTGCTTTGGTTTCCTTCCTGGATTTTGCTATTATTGGATCAGTTTCCACATCTGAGGCTATAGAAGCACTTGCTGCACTGTCCAGGTTGGAACAGAATAGTGCACATATAAAACCGGCATGGGCTGTATTGGCTGAATTACCTGAAAGTATAAATCCAATAGTGCTGTCTATTGCTGATTCAACACCAATGTTTCAAGATAAAGCTATCGAGATATTATCCCAGTTATGCAGGGATCAGTCTGTTGTTCTTGGAAACAATGTTATTGCGGCCTCTGGATGCTTGCGTTCATTGGCTAAAAGGGTCATTGGTGCCAAAAATGTAAAGGTCAAAATCGGGGGAGCTGCGCTTCTTATTTGTGCTGCCAAAGTAAACCACCGGAGACTGGTGGAGGAACTCAACCAATCAAACTTGTGTGTTGATCTTGTTCAATCTCTTGTTAATGTTCTTTCTTCTGCACTGCCTTTGTCAAACCCGGATGAAGAAAAGAAGGAATTCATTAGCATTATCATACATAGAAAAGAAGATGTTAATGGAGGTGATTCCAACACAGGCTCTGCCGCTGTAACTGTATCTGATGCCAACTTAGCCATATTGTTATTGTCTATTCTTGCCTGTCATGATGAAAAATGCAAAATTGCTATAATGGAGGCTGGAGCAATTGACATTCTCACTGAAAAAATCTCAGAGTGTTACTCACAATATACCCAGGTTGATTATAAAGAAGATAGTAGCATGTGGATTTGTGCGTTATTGTTGGCTGTATTATTTCAAGATAGAGATATCATCAGAGCACATGCTACCATGAAATCTGTTCCAGCTGTTGCCAGTTTATTGAAGTCGGAGGAATTAGGTAACAGATATTTTGCAGCACAATCAGTGGCTAGCCTTGTCTGTAATGGAAGCAGGGGGACACTACTCTCTGTTGCGAATTCAGGGGCTGCAAGTGGGCTAATCTCATTACTTGGCTGTGCTGACATTGATATACAGGACCTTCTGGACTTGTCAGAGGAGTTCTCCTTGGTTCGTCATCCTGATCAAGTTGCTCTAGAGAGGTTGTTCAGAGTTGATGACATTAGGGTTGGTGCAACTTCACGGAAGGCAATACCCGCTCTTGTTGATCTGCTCAAACCAATTCCAGATCGCCCAGGAGCACCTTTTTTAGCTCTTGGACTTCTAACTCAGCTTGCCAGAGACTGCCCATCCAATAAGGTTGTAATGGTGGAATCTGGGGCCTTGGAGGCACTTACAAAGTATCTTTCCCTGGGTCCCCAAGATGCCACTGAAGAAGCTGCTACTGATCTATTGGGAATTCTGTTTGACAGTGCTGAGATACGGAGACATGAGGCAGCATTTGGTGCTGTTAGTCAACTTGTGGCTGTGTTACGTTTAGGAGGAAGAGGTGCAAGGTACAGTGCCGCCAGGGCATTGGAAAATTTGTTCTCTGCCGATCAGATTCGGAATGCAGAGACTGCTCGGCAAGCTGTTCAACCCTTGGTGGAGATTCTTAGCACTGGTTTAGAGAAGGAGCAGCATGCTGCAATTGCTACATTGGTTAGGCTCCTAAGCGAAAATCCTTCGAAAGCACTAGCTGTTGCTGATGTTGAAATGAATGCAGTGGATGTGCTTTGCAGGATCCTTTCATCAAATTGTTCATTGGACCTCAAAGGGGATGCGGCTGAATTATGTTGTGTTCTGTTTGGAAATACACGGATTAGGTCCTCTGTGGCTGCTGCACGATGTGTTGAACCTCTAGTTTCTCTCCTTGTAAGCGAGTTTAGTCCTGCCCAGCATTCAGTTGTCCGTGCACTGGATAGGCTTGTTGATGACGAGCAGTTGGCTGAACTAGTTGCTGCTCACGGTGCCATTATTCCCCTTGTTGGTCTTTTGTATGGTAGGAATTATTTGCTCCATGAGGCCATTTCTAGAGCTTTGGTTAAGCTTGGAAAAGATAGACCTTCTTGTAAAATGGAAATGGTCAAAGCTGGAGTTATTGAAAGCATACTTGATATTCTTCATGAAGCACCTGATTATCTGTGTGCGGCATTTGCTGAATTGCTGCGTATATTGACCAATAATGCCAGCATAGCTAAAGGGCAGTCTGCTTCTAAAGTGGTTGAGCCCCTATTTTTGTTGCTGGCGAGAGAAGAATTTGGGCCTGATGGACAACACAGTGCATTGCAGGTTTTGGTTAATATCTTGGAACATCCACAATGTCGTGCTGACTATACATTGACATCCCACCAAGCTATTGAGCCACTTATCCCCTTGCTTGATTCTCCAATACCAGCAGTGCAACAGTTGGCTGCTGAGCTTCTCTCGCATCTGCTTTTGGAAGAGCACCTTCAAAAGGATCCAGCAACACAGCAAGTAATTGGTCCTCTTATTCGAGTACTTGGTTCTGGCATCCATATATTGCAGCAGAGAGCTGTAAAGGCCCTTGTTAGTATTGCATTGATATGGCCGAATGAAATTGCAAAAGAGGGTGGTGTTGTTGAGCTTTCGAAAGTGATACTGCATGCTGATCCTTCACTTCCTCATGCTTTATGGGAATCTGCTGCTTCTGTTTTGTCAAGTATTCTGCAATTCAGTTCTGAATTCTACTTGGAAGTGCCAATTGCTGTATTGGTAAGATTGCTTCGTGCTGGCTCAGAGAGCACTGTAATTGGTGCATTAAATGCTCTTCTAGTGCTGGAAAGCGATGATGGGACTAGTGCAGAAGCAATGGCTGAAAGTGGTGCCATAGAGGCTCTTTTAGAGCTTCTAAGATCTCATCAGTGCGAGGAAACTGCTGCTAGACTTCTGGAAGTATTGCTAAACAATGTCAAGATTAGAGAAACTAAAGCTACCAGATCAGCCATTGTACCTTTATCTCAGTACCTCCTGGATCCACAAACCCAAGGACAGCAGGCAAGGTTACTGGCAACTTTGGCTCTTGGGGATCTATTTCAGAATGAGAGCCTTGCTCGAACAAGTGATGCAGTTTCAGCATGTCGTGCTTTGGTGAATGTGCTTGAAGATCAACCAACAGAAGAAATGAAAGTTGTTGCTATATGTACTTTGCAGAACCTTGTGATGCATAGTCGATCAAATAAAAGAGCCGTTGCTGAGGCTGGTGGTGTACAGGTCGTGTTGGATCTGATAGGTTCTAGTGATCCAGAAACATCAGTTCAGGCTGCAATGTTCATTAAACTTCTCTTCTCTAATCATACAATTCAAGAATATGCTTCAAGTGAAACAGTCAGAGCAATAACTGCTGCCATTGAAAAGGATTTATGGGCTACTGGAAATGTTAATGATGAGTATCTGAGAGCCTTGAACGCTCTTTTTAGCAATTTCCCACGACTGAGAGCAACTGAGCCAGCAACACTTAGCATTCCCCATCTCGTTACATCATTAAAGACTGGCTCTGAGGCCACTCAAGAAGCTGCATTGGACGCACTTTTTCTTCTCAGGCAAGCTTGGTCAGCATGTCCAGCGGAAGTCTCAAGGGCTCAGTCAATAGCAGCTGCAGACGCTATTCCTTTGCTACAGTACTTAATCCAGTCTGGTCCTCCTCGGTTTCAAGAGAAGGCTGAATTCTTATTGCAGTGTTTGCCTGGCACGTTAGTTGTGATCATAAAACGTGGTAACAACATGAAGCAGTCAGTTGGAAACCCAAGTGTTTACTGTAAGCTTACACTTGGCAACACTCCTCCAAGGCAAACCATGGTGGTCTCAACTGGCCCTAATCCGGAGTGGGATGAGAGCTTTTCATGGTCCTTTGAGAGCCCTCCAAAAGGCCAGAAGCTTCATATTTCTTGCAAAAATAAGAGCAAAGTGGGAAAGAGTTCATTTGGGAAAGTGACAATCCAAATTGATCGCGTGGTGATGCTTGGATCTGTAGCCGGAGAATACACTCTGCTGCCACAAAGTAAAAGTGGCCCCTCAAGGAATTTAGAGATAGAATTCCAGTGGTCTAACAAGTGA 6687 0.4426 MESTKWRIINRQNRSGIHRCRCWRRTIPSSLVEDRHCHCSGGPLPPVVRGKGWGLGKEITQGGNSIPRGSGKNELNMTTTLAWRSGSNNGSSLAANDMEKNGEGNIPESEPPTPHSVLKMGLRDRSSSMEDPDGTLASVAQCIEQLRQSSSSAEEKEYSLRQLLELIDMRENAFSAVGSHSQAVPVLVSLLRSGSLSVKIQAATVLGSLCKENELRVKVLLGGCIPPLLGLLKSSSAEGQVAAAKTIHAVSQGGSKDHVGSKIFSTEGVVPVLWEQLQKGLKTGNVVDGLLTGALKNLSSNTEGFWNATIQAGGVDILMKLLTTGHPNTLANVCFLLASVMMEDASVCSKVLTSEATKQLLKLLGPGNDAPIRAEAAGALKSLSSQCKEARREISNSNGIPALINATIAPSKEFMQGEHAQALQESAMCALANISGGLSYVISSLGQSLESCTSATQIADTLGALASALMIYDNEAEATRTSDPLVVEQTLLKQLKSQSPFLVKERTIEALASLYGNPLLSIKLANSDAKHLLVGLITMAVNEVQDDLIRALLTLCNNEGSLWRALQGREGVQLLISLLGLSSEQQQECAVALLCLLSNENDESKWAITAAGGIPPLVQILETGSTKAKEDSAKILTNLCNHSEDIRACVESANAVPALLWLLKNGSPNGKEIAAKTLNHLIHKSDTTTISQLTALLTSDLPESKVYVLDALKSMLSVAPLSDIQREGSAASDAIETMIKLMSSTKEETQAKAASALAGIFEMRKDVRESSVAVKALMSAMRLLNIESESILIESSHCLAAIFLSIKENRDVAAVARDALLPLVSLANSSDFDVAELATCAVANLILDREMSERAVAEEVILPATRVLREGTISGKTHAAAAIARLIHYRQVDYSIIECVNRAGTVLALVSFLDFAIIGSVSTSEAIEALAALSRLEQNSAHIKPAWAVLAELPESINPIVLSIADSTPMFQDKAIEILSQLCRDQSVVLGNNVIAASGCLRSLAKRVIGAKNVKVKIGGAALLICAAKVNHRRLVEELNQSNLCVDLVQSLVNVLSSALPLSNPDEEKKEFISIIIHRKEDVNGGDSNTGSAAVTVSDANLAILLLSILACHDEKCKIAIMEAGAIDILTEKISECYSQYTQVDYKEDSSMWICALLLAVLFQDRDIIRAHATMKSVPAVASLLKSEELGNRYFAAQSVASLVCNGSRGTLLSVANSGAASGLISLLGCADIDIQDLLDLSEEFSLVRHPDQVALERLFRVDDIRVGATSRKAIPALVDLLKPIPDRPGAPFLALGLLTQLARDCPSNKVVMVESGALEALTKYLSLGPQDATEEAATDLLGILFDSAEIRRHEAAFGAVSQLVAVLRLGGRGARYSAARALENLFSADQIRNAETARQAVQPLVEILSTGLEKEQHAAIATLVRLLSENPSKALAVADVEMNAVDVLCRILSSNCSLDLKGDAAELCCVLFGNTRIRSSVAAARCVEPLVSLLVSEFSPAQHSVVRALDRLVDDEQLAELVAAHGAIIPLVGLLYGRNYLLHEAISRALVKLGKDRPSCKMEMVKAGVIESILDILHEAPDYLCAAFAELLRILTNNASIAKGQSASKVVEPLFLLLAREEFGPDGQHSALQVLVNILEHPQCRADYTLTSHQAIEPLIPLLDSPIPAVQQLAAELLSHLLLEEHLQKDPATQQVIGPLIRVLGSGIHILQQRAVKALVSIALIWPNEIAKEGGVVELSKVILHADPSLPHALWESAASVLSSILQFSSEFYLEVPIAVLVRLLRAGSESTVIGALNALLVLESDDGTSAEAMAESGAIEALLELLRSHQCEETAARLLEVLLNNVKIRETKATRSAIVPLSQYLLDPQTQGQQARLLATLALGDLFQNESLARTSDAVSACRALVNVLEDQPTEEMKVVAICTLQNLVMHSRSNKRAVAEAGGVQVVLDLIGSSDPETSVQAAMFIKLLFSNHTIQEYASSETVRAITAAIEKDLWATGNVNDEYLRALNALFSNFPRLRATEPATLSIPHLVTSLKTGSEATQEAALDALFLLRQAWSACPAEVSRAQSIAAADAIPLLQYLIQSGPPRFQEKAEFLLQCLPGTLVVIIKRGNNMKQSVGNPSVYCKLTLGNTPPRQTMVVSTGPNPEWDESFSWSFESPPKGQKLHISCKNKSKVGKSSFGKVTIQIDRVVMLGSVAGEYTLLPQSKSGPSRNLEIEFQWSNK 2228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g2002 2228 SUPERFAMILY ARM repeat 141 369 IPR016024 -
Acco04g2002 2228 Gene3D - 481 721 IPR011989 -
Acco04g2002 2228 Gene3D - 125 480 IPR011989 -
Acco04g2002 2228 Gene3D - 1444 1725 IPR011989 -
Acco04g2002 2228 FunFam Coatomer beta subunit 1693 2106 - -
Acco04g2002 2228 Gene3D C2 domain 2107 2228 IPR035892 -
Acco04g2002 2228 Coils Coil 373 393 - -
Acco04g2002 2228 SUPERFAMILY ARM repeat 1657 2105 IPR016024 -
Acco04g2002 2228 MobiDBLite consensus disorder prediction 84 115 - -
Acco04g2002 2228 SMART arm_5 1261 1304 IPR000225 GO:0005515
Acco04g2002 2228 SMART arm_5 643 683 IPR000225 GO:0005515
Acco04g2002 2228 SMART arm_5 1807 1846 IPR000225 GO:0005515
Acco04g2002 2228 SMART arm_5 1348 1388 IPR000225 GO:0005515
Acco04g2002 2228 SMART arm_5 387 436 IPR000225 GO:0005515
Acco04g2002 2228 SMART arm_5 1934 1974 IPR000225 GO:0005515
Acco04g2002 2228 SMART arm_5 601 641 IPR000225 GO:0005515
Acco04g2002 2228 SMART arm_5 1306 1347 IPR000225 GO:0005515
Acco04g2002 2228 SMART arm_5 893 938 IPR000225 GO:0005515
Acco04g2002 2228 SMART arm_5 809 847 IPR000225 GO:0005515
Acco04g2002 2228 SMART arm_5 170 211 IPR000225 GO:0005515
Acco04g2002 2228 SMART arm_5 722 762 IPR000225 GO:0005515
Acco04g2002 2228 SMART arm_5 1558 1598 IPR000225 GO:0005515
Acco04g2002 2228 SMART arm_5 1475 1515 IPR000225 GO:0005515
Acco04g2002 2228 SMART arm_5 1516 1556 IPR000225 GO:0005515
Acco04g2002 2228 SMART arm_5 212 252 IPR000225 GO:0005515
Acco04g2002 2228 SMART arm_5 1643 1684 IPR000225 GO:0005515
Acco04g2002 2228 SMART arm_5 344 385 IPR000225 GO:0005515
Acco04g2002 2228 SMART arm_5 1390 1429 IPR000225 GO:0005515
Acco04g2002 2228 ProSiteProfiles C2 domain profile. 2088 2205 IPR000008 -
Acco04g2002 2228 SMART C2_3c 2108 2204 IPR000008 -
Acco04g2002 2228 Pfam Armadillo/beta-catenin-like repeat 180 210 IPR000225 GO:0005515
Acco04g2002 2228 Pfam Armadillo/beta-catenin-like repeat 601 640 IPR000225 GO:0005515
Acco04g2002 2228 SUPERFAMILY ARM repeat 1398 1731 IPR016024 -
Acco04g2002 2228 CDD C2 2109 2199 - -
Acco04g2002 2228 FunFam Protein CELLULOSE SYNTHASE INTERACTIVE 1 1457 1691 - -
Acco04g2002 2228 FunFam Protein CELLULOSE SYNTHASE INTERACTIVE 1 2107 2228 - -
Acco04g2002 2228 SUPERFAMILY ARM repeat 1098 1456 IPR016024 -
Acco04g2002 2228 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1902 1945 IPR000225 GO:0005515
Acco04g2002 2228 Gene3D - 722 913 IPR011989 -
Acco04g2002 2228 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 612 654 IPR000225 GO:0005515
Acco04g2002 2228 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 107 2228 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Acco04g2002 2228 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2106 2225 IPR035892 -
Acco04g2002 2228 Gene3D - 1729 2106 IPR011989 -
Acco04g2002 2228 Gene3D - 954 1443 IPR011989 -
Acco04g2002 2228 Pfam C2 domain 2107 2197 IPR000008 -
Acco04g2002 2228 SUPERFAMILY ARM repeat 585 938 IPR016024 -
Acco04g2002 2228 SUPERFAMILY ARM repeat 294 685 IPR016024 -
Acco04g2002 2228 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1273 1317 IPR000225 GO:0005515
Acco04g2002 2228 MobiDBLite consensus disorder prediction 84 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g2002 Acco-ChrAcco04 34927559 34938707 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g2002 533 710 U-box Gene Family AT3G46510 30.435 2.23e-07 54.3