Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1984 ATGGATCCTTACTGTGAAGAGTTGATAAAAGCACTCCAAACTTTGAACTCTGCTTCATCTTCTTCATTCATCCACACAAGTCCCATGAGGCTGAACCAGCTCAAACCATCTCAGATTCAAGAAATCCAATCCCAAATAATCCACAAGCACAAAAACACCACGCATCATGTTCATCGCCATGTTGTTTCTTCTTCTTCTTCTTCACCTTCACTACAACGTTGTAAGCCAACAAAAACCTACAGAGGAGTCAGACAGAGACATTGGGGAAAATGGGTCGCCGAGATCCGACTGCCCAAGAACCGAACCAGACTCTGGCTCGGCACTTTCCACACGGCAGAGCAGGCCGCTTTGGCCTACGACTACGCCGCCTATAAACTCAGAGGAGACTTTGCTCGCCTCAATTTCCCTCACTTGCGCCACCGTGGAGCTCATGTGATCGGTGAATTCGGCGACTACATGCCACTTCACTCATCTGTGCATGCCAAGCTCCAAGCTTTATGTGAAAGCTTAGCTGACAATTCACAGAAACAGGGGAATGCAGAAAACACTACTCTGTCCAACTTAGCCTCGTGTTCATTGTCGTCGGATGAATTAGAGATTACTTACTGGGATTTCTCGGATTCTAAAGTAGATGAAACAGAGGTTGTTGGTTTGGAGAAGTATCCTTCCATTGAGATCGATTGGTCTGCTATCTGA 696 0.4641 MDPYCEELIKALQTLNSASSSSFIHTSPMRLNQLKPSQIQEIQSQIIHKHKNTTHHVHRHVVSSSSSSPSLQRCKPTKTYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFHTAEQAALAYDYAAYKLRGDFARLNFPHLRHRGAHVIGEFGDYMPLHSSVHAKLQALCESLADNSQKQGNAENTTLSNLASCSLSSDELEITYWDFSDSKVDETEVVGLEKYPSIEIDWSAI 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1984 231 Gene3D AP2/ERF domain 78 137 IPR036955 GO:0003700|GO:0006355
Acco04g1984 231 SMART rav1_2 79 142 IPR001471 GO:0003700|GO:0006355
Acco04g1984 231 FunFam Ethylene-responsive transcription factor 2 78 137 - -
Acco04g1984 231 Pfam AP2 domain 80 128 IPR001471 GO:0003700|GO:0006355
Acco04g1984 231 CDD AP2 80 138 IPR001471 GO:0003700|GO:0006355
Acco04g1984 231 PRINTS Ethylene responsive element binding protein signature 102 118 IPR001471 GO:0003700|GO:0006355
Acco04g1984 231 PRINTS Ethylene responsive element binding protein signature 80 91 IPR001471 GO:0003700|GO:0006355
Acco04g1984 231 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 17 231 - -
Acco04g1984 231 ProSiteProfiles AP2/ERF domain profile. 79 136 IPR001471 GO:0003700|GO:0006355
Acco04g1984 231 SUPERFAMILY DNA-binding domain 79 137 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1984 Acco-ChrAcco04 34321533 34322228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1984 2 231 AP2-EREBP Transcription Factor Family AT4G39780 46.792 2.79e-67 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco04g1984 AP2 5.5e-13 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g1984 04 34321533 34322228 Acco04g1984 04 34321533 34322228 ECH