Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1983 ATGACGCAGCAGAATGTGGTGGTTTCTGACGCCAATTCCAGAATCAACCTTCAGGCTTTCACCGCCGCCGTCTCTAACTCCTTCAATTTCATCACCGCACCTCATAAGCCCCTCGCCGCCCCAACCGGTGGTGCCGTCGCCGGCTTCGTCTCCATTTCCAGGAACAAGTTCCTGAAGACCCTGGACATCAATGGAACCGCCAAAATCAATTCCTTGGTGGACTCCATGCGCGCCTCCTCCCCCACCCGCCACCACTCCTCCACCACCGCTCTCACCACCTCCCCTGTTGACTCACAACACAACTCTTGGATCCTTCATCACCCATCCGCATTAGTTATGTTTGAGCAAATAATCGAAGCTTCCAGAGGAAAGCAGATAGTCGTGTTTCTTGACTACGACGGTACGCTCTCCCCCATCGTCGACGACCCTGATCGTGCTTTCATGTCCGACGCCGTTATAAAATCCTCAATTCTTACTTACGTTACATACGTGTTCACACAGATGAGGAAGACGGTGAGAAACCTCGCCAGGTGTTTTCCGACCGCCATAGTAAGCGGCAGATGCAGAGACAAGGTGTACAGCTTTGTTCGGTTGGCAGAGCTATATTATGCAGGGAGCCATGGGATGGACATTAAAGGACCAACTAAAATCTCTAAATACAATAAAGACAGTAAAGCGATTCTGTTTCAGCCTGCCTGTGAATTTTTACCCATGATGGCCAAGGTGTATAAACTGTTAGTTGAGAAAACAAGTTCAACTCCAGGAGCTAAAGTGGAGAACAATAAGTTCTGTGTATCGGTTCATTTTCGCTGCGTTGATGAAAAGAAATGGAGCGAACTGGGAAACCAGGTTAGATCAGTTTTAAAGGAGTACCCCAAGCTTCGTCTTACTCAAGGAAGAAAGGTACTTGAGATTCGTCCCCCTATTAAATGGGACAAAGGGGAGGCCCTGGAATTTTTGTTACAGTCACTTGGTTTTGCCAACTGTACCGACGTCTTCCCGGTTTATATTGGCGACGATCGATCCGATGAAGATGCGTTCAAGAAACTAAAAGAGAGAGGAAAAGGCTATGGCATTCTTGTCTCAAAATTCCCGAAAGACACGAGTGCCTCTTACTCTTTACAAGAACCCGACGAGGCAAGTGATGGATTTTCTGCAGCGATTGGTGGAGTGGAAGAGAGTTTCAGTGAGGGCTCGTTTCAGGGTCCAAAATGA 1215 0.4815 MTQQNVVVSDANSRINLQAFTAAVSNSFNFITAPHKPLAAPTGGAVAGFVSISRNKFLKTLDINGTAKINSLVDSMRASSPTRHHSSTTALTTSPVDSQHNSWILHHPSALVMFEQIIEASRGKQIVVFLDYDGTLSPIVDDPDRAFMSDAVIKSSILTYVTYVFTQMRKTVRNLARCFPTAIVSGRCRDKVYSFVRLAELYYAGSHGMDIKGPTKISKYNKDSKAILFQPACEFLPMMAKVYKLLVEKTSSTPGAKVENNKFCVSVHFRCVDEKKWSELGNQVRSVLKEYPKLRLTQGRKVLEIRPPIKWDKGEALEFLLQSLGFANCTDVFPVYIGDDRSDEDAFKKLKERGKGYGILVSKFPKDTSASYSLQEPDEASDGFSAAIGGVEESFSEGSFQGPK 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1983 404 Gene3D - 246 389 IPR023214 -
Acco04g1983 404 Gene3D - 126 227 IPR023214 -
Acco04g1983 404 CDD HAD_TPP 127 379 - -
Acco04g1983 404 Pfam Trehalose-phosphatase 129 377 IPR003337 GO:0003824|GO:0005992
Acco04g1983 404 NCBIfam HAD-IIB family hydrolase 128 353 IPR006379 -
Acco04g1983 404 NCBIfam trehalose-phosphatase 124 379 IPR003337 GO:0003824|GO:0005992
Acco04g1983 404 FunFam Trehalose 6-phosphate phosphatase 232 308 - -
Acco04g1983 404 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 47 382 IPR044651 GO:0004805|GO:0005992
Acco04g1983 404 SUPERFAMILY HAD-like 127 381 IPR036412 -
Acco04g1983 404 FunFam Trehalose 6-phosphate phosphatase 238 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1983 Acco-ChrAcco04 34276348 34279294 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1983 115 350 Trehalose Biosynthesis Gene Families AT1G70290 27.642 1.54e-08 55.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco04g1983 04 34276348 34279294 Acco04g1983 04 34276348 34279294 ECH