Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1969 ATGGGACGAAGGCAATCTCTACGGAGCAAAGCAGCTCACTTTGTTTCGGATCTCACCACTGTTCTACTCAATCCAATCTCTGACAAACCCTCTAAATCCCCTCCTCCTCCTTCTGAAGGAGTGGACATATCAGATGTGCCTGATTCGGAGTCTGCTAAACGAGATGGCAGCCAGAATTTAACTGATGGGCCTGATACTTCATCCTTCACTTCATTCCTCTACTCGTTCTTGTCTTCTTCAGATTCTAGAGATAATGTAAACTCAGATGGGCAAAATGACACTAGAAGTATTGCTGATGTTCCTCCATCGGGCTCAACCATGAAGGAAAATATTGGAAAGAAAAGTTTGTTTTCTAAGGGTAGGCAAACACTTGGTAGATATATCAACCAAGCTGCAAGAATCACAAGATTCCGATCTCAAGAACCGAAGGATGAGACTGAAATGAAATTGGATAATGGACATGGTTCTAGATTATCTGATGTTGAGATGAGGCATGTTAAGCCTGAGGAGGAGGAGCATACATCTTTGATTGATCCGCCAGAACCTTCTGAACCTTCAGCACTCCTTTCAGAGAAAATGAGAAATATTCTTTATGCTTCTCTTCCTGCTCTCATTCATGGGAGGAAATGGATGCTGCTATACAGTACACAGAGGCATGGGGTATCACTTTTGACACTGTACAGGAGAAGCATGCTTTGGCCTGGCTTGAGTTTACTGGTTGTTGGAGATCGTAAAGGTGCAGTTTTTGGTGGCTTGGTTGAAGCACCACTAAAGCCATCAGGCAAAAGATATCAGGGAACAAATAGTACTTTTGTCTTCACAAACACCTCTGGCCATCCTACTGTGTATCGCCCAACAGGCGTAAACCGCTATTTCACACTATGCTCCACTGACTTTCTAGCCATTGGTGGGGGAGGTCATTTTGCGCTTTATTTGGACAGTGATCTATTGAACGGGTCTAGTTCTGTCTCAGAAACTTATGGAAATCCTTGCCTTGCGCATTCTCAGGACTTTGAAGTTAAGGAAGTAGAGTTGTGGGGCTTTGTATATGGTTCAAAGTATGAAGAAGTTTTGGCATTGAGCCGAACAGAGGCACCTGGAATCTGCCGATGGTAG 1116 0.4391 MGRRQSLRSKAAHFVSDLTTVLLNPISDKPSKSPPPPSEGVDISDVPDSESAKRDGSQNLTDGPDTSSFTSFLYSFLSSSDSRDNVNSDGQNDTRSIADVPPSGSTMKENIGKKSLFSKGRQTLGRYINQAARITRFRSQEPKDETEMKLDNGHGSRLSDVEMRHVKPEEEEHTSLIDPPEPSEPSALLSEKMRNILYASLPALIHGRKWMLLYSTQRHGVSLLTLYRRSMLWPGLSLLVVGDRKGAVFGGLVEAPLKPSGKRYQGTNSTFVFTNTSGHPTVYRPTGVNRYFTLCSTDFLAIGGGGHFALYLDSDLLNGSSSVSETYGNPCLAHSQDFEVKEVELWGFVYGSKYEEVLALSRTEAPGICRW 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1969 371 SMART 109ultra 186 349 IPR006571 -
Acco04g1969 371 MobiDBLite consensus disorder prediction 79 116 - -
Acco04g1969 371 Pfam TLD 212 348 IPR006571 -
Acco04g1969 371 MobiDBLite consensus disorder prediction 22 67 - -
Acco04g1969 371 MobiDBLite consensus disorder prediction 53 67 - -
Acco04g1969 371 PANTHER NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED 16 350 - -
Acco04g1969 371 ProSiteProfiles TLDc domain profile. 187 349 IPR006571 -
Acco04g1969 371 MobiDBLite consensus disorder prediction 165 186 - -
Acco04g1969 371 MobiDBLite consensus disorder prediction 79 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1969 Acco-ChrAcco04 33875060 33878029 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1969 209 356 EF-hand Containing Proteins AT5G06260 30.380 2.39e-14 71.6