Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1946 ATGTCTGAAGAAAATGAGCAGTACAAGATTGAAAGTTCAGGAAAAGGAGAAGAAATGAGAAAACAATTTACTGAAGTGAAAAAATTGAGAAAAGGAAAAATGCAACGAAAATGTGCTAAAGATGCATCAAAGAAGACAGCACATGGTTCATCGGAAGAGTATTCTGCAACTGCTGGGGATGCAATCTCTAGTCATAGAGCCCTGCTGCTGACTGCAAAGGTTCATGGTACCTTTGTTGTGTGCCATTTAGCTGACATGCCAAGGGTTGATTATGCATGCACGCCTGAAGAAGTGCAGCAACACTTCCAATCATGTGGGACAGTGAATAGGGTGACTATCCTTACAGACAAGTTTGGTCATCCAAAAGGTTTTGCTTACGTGGAATTCCTTGAACCTGAAGCTGTTCAAGAGGCTGTTGCCTTGAATGAATCTGAACTGCATGGTCGTCAGTTGAAGGTTATGCCAAAGAGGACCAATGTCCCTGGAATGAAACAGTATCGCCCCAGGCGTTTCAATCCTTATATGGGGTATCGCTTCAGGAGGCCATTCCCTCCTCCTTACTTTTACTCGCCGTATGGGTATGGGAAGGTTCCCAGGTTCAGAAGGCCAAGTCGGTACATGCCATATTATTAG 633 0.4408 MSEENEQYKIESSGKGEEMRKQFTEVKKLRKGKMQRKCAKDASKKTAHGSSEEYSATAGDAISSHRALLLTAKVHGTFVVCHLADMPRVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEPEAVQEAVALNESELHGRQLKVMPKRTNVPGMKQYRPRRFNPYMGYRFRRPFPPPYFYSPYGYGKVPRFRRPSRYMPYY 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1946 210 MobiDBLite consensus disorder prediction 1 53 - -
Acco04g1946 210 SUPERFAMILY RNA-binding domain, RBD 89 180 IPR035979 GO:0003676
Acco04g1946 210 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 9 166 - -
Acco04g1946 210 SMART rrm1_1 80 154 IPR000504 GO:0003723
Acco04g1946 210 CDD RRM_II_PABPs 89 153 - -
Acco04g1946 210 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 79 158 IPR000504 GO:0003723
Acco04g1946 210 MobiDBLite consensus disorder prediction 1 29 - -
Acco04g1946 210 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 90 152 IPR000504 GO:0003723
Acco04g1946 210 Gene3D - 86 162 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1946 Acco-ChrAcco04 33452551 33454544 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1946 65 178 Eukaryotic Initiation Factors Gene Family AT2G36660 28.947 1.39e-08 52.4