Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1921 ATGCCCGCCACTTGGCCAATTATCTCCTCCGGCGTTGGCCACGATGTTGATCAAAGCTATGTTCTTCGAGTCGTGATGACCTCCATAGCTTCCATAATTGCTCTGCTTGTCCTTATCTTTGTCGTGCTAAAATTTATAGGAAGATACTACTTCTCGAGGAGATATTATAACAATAGGAGAATCGACTCACCGATTTTGTTTGATATTCGCGGCGATTCTGCGTTCTCCGATGACGACGATGGACCACCAATTATCCATCCGATCTGGTTCATCAACACCGTCGGTCTCCAGCAATCCGTTATCGATTCAATCGCCATCTTCAAATACAGAAAAGACGATGGGTTAATTGAAGGAACGGAATGTTCTGTGTGTTTAGGTGAATTTCAAGAAGACGATAGCCTCCGAATCTTACCTAAATGCACCCACGCTTTTCACGTTCAATGCATCGATACTTGGCTGAGATCGCGGAAGAATTGCCCCTTGTGTCGAGCTCCGATTGTTCGTGAAACTTCCGGGAGAGAGGTACCTGCCGTGACGGTGCCTGAACTTGAGGTCGTCGGCGAGATCCGTATGGAGAACTCGGGTGGTAGTGGTAGGGTTGATAGTTCCCAGGTTGGAGAAGGAGAGAGTAGTCAATTGAGGGTTGGAATGACGATGATTCTGGGATTGTGGCTATTGAAGATGGAGCAGATTGTGAAGTTTCAGATAAGAATTTGGGAAATTGTGAGAAGATGA 735 0.4626 MPATWPIISSGVGHDVDQSYVLRVVMTSIASIIALLVLIFVVLKFIGRYYFSRRYYNNRRIDSPILFDIRGDSAFSDDDDGPPIIHPIWFINTVGLQQSVIDSIAIFKYRKDDGLIEGTECSVCLGEFQEDDSLRILPKCTHAFHVQCIDTWLRSRKNCPLCRAPIVRETSGREVPAVTVPELEVVGEIRMENSGGSGRVDSSQVGEGESSQLRVGMTMILGLWLLKMEQIVKFQIRIWEIVRR 244
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1921 244 CDD RING-H2_EL5-like 120 163 - -
Acco04g1921 244 FunFam RING-H2 finger protein ATL54 96 169 - -
Acco04g1921 244 Pfam Ring finger domain 120 163 IPR001841 -
Acco04g1921 244 SMART ring_2 121 162 IPR001841 -
Acco04g1921 244 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 95 171 IPR013083 -
Acco04g1921 244 SMART FANCL_C_2 117 170 - -
Acco04g1921 244 SUPERFAMILY RING/U-box 106 173 - -
Acco04g1921 244 ProSiteProfiles Zinc finger RING-type profile. 121 163 IPR001841 -
Acco04g1921 244 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 23 169 IPR044675 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Acco04g1921 Acco-ChrAcco04 32567061 32567795 Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1921 78 232 C3H Transcription Factor Family AT4G33565 46.988 2.72e-41 143