Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1917 ATGGAGTCCAGACTCCTAGGTTGGTCCCACCTATTGTTCATGGTCTTGGCCGTGAGTCCCCACCGTAGCTCCCATGCACAGTCGGCCACATCATCTACCTGGCCTGGCACGACGTTAAAAGAAGCTCTCAACAAAACTCACTTCGCTGCTATTCTCGTCGCCTTCCTCTCTTCCATTGTCTTCCTGATTTTCTTCTCCCTCTTGATTCGTCACTGTGTTGATACCTGCGTCACCAGTAGGACTCACATTATCTCCGCCGTCGTCAACGACCGTCACTGCCGTGAGGTCATCGATAATTGTCCCGTACTCGTCTACTCCGACGTGAAGGACCTCAGGATTGGGAACTCGGCCATTGAGTGTGCTGTTTGCCTGAGCGAGTTCGATGACTCTAACAAGATCCGCTTGCTGCCAAAATGCAATCACGTTTTCCATCCCGATTGTATTGATAGGTGGTTCGCTTCACGCCTTACTTGCCCTGTTTGTCGCGCCAAGCTCACTCCGCCTGATTCCGCCAACAATTCCGACGCCGACGCCGTGACCGAGTTGTTGAATCACGATGAATCATCCGCTGCAGATTCCGAACAGAGCTCGTTGGACTTGCCGGGGCCACTGGTGGAAAGGATTGGTGTGGATGATGGAAGTGGAAGCGGTGGTACGGGTCTTCCAGCGGAGACTGAACCGCCAATTCGGTCAAGAACGACGACGGAAAGCCTTGGGAGGTCACACTCGACGGGTCACTGTCTGTTCATGGAAAGTGAAGGGGTGATGGAGAGGTACACGCTAAGATTACCTGAGCACGTGAGGGAGGAGATATTTGGGAAAAATCAGAGAAGGCTTCGACGTTGTGCGAGTAGCAACGACGTCGTTTTGAGCGGAGAATGGAGCTCAAAGAAAGGAAGAGATAATATGGAGAGGTGGGTGTTGCTCTGCAATATGACGCCGGCGTTTGTTTCAAAAGATTGGAGCTCTGTGAAATTTGTGAAGCAGAATTCTGATCAAAGCTCGCCGCTGCCGCTTAGGCCTCCGGTTTGA 1032 0.5223 MESRLLGWSHLLFMVLAVSPHRSSHAQSATSSTWPGTTLKEALNKTHFAAILVAFLSSIVFLIFFSLLIRHCVDTCVTSRTHIISAVVNDRHCREVIDNCPVLVYSDVKDLRIGNSAIECAVCLSEFDDSNKIRLLPKCNHVFHPDCIDRWFASRLTCPVCRAKLTPPDSANNSDADAVTELLNHDESSAADSEQSSLDLPGPLVERIGVDDGSGSGGTGLPAETEPPIRSRTTTESLGRSHSTGHCLFMESEGVMERYTLRLPEHVREEIFGKNQRRLRRCASSNDVVLSGEWSSKKGRDNMERWVLLCNMTPAFVSKDWSSVKFVKQNSDQSSPLPLRPPV 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1917 343 PANTHER RING FINGER DOMAIN-CONTAINING 27 170 - -
Acco04g1917 343 MobiDBLite consensus disorder prediction 186 243 - -
Acco04g1917 343 MobiDBLite consensus disorder prediction 228 242 - -
Acco04g1917 343 SUPERFAMILY RING/U-box 119 169 - -
Acco04g1917 343 Pfam Ring finger domain 119 162 IPR001841 -
Acco04g1917 343 FunFam E3 ubiquitin-protein ligase ATL6 84 168 - -
Acco04g1917 343 CDD RING-H2_EL5-like 119 162 - -
Acco04g1917 343 ProSiteProfiles Zinc finger RING-type profile. 120 162 IPR001841 -
Acco04g1917 343 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 78 168 IPR013083 -
Acco04g1917 343 SMART ring_2 120 161 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1917 Acco-ChrAcco04 32474807 32475838 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1917 24 338 Rapid Response to Elicitors AT3G05200 32.335 3.15e-40 144