Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1910 ATGGGTCTCTCTAATATCCCTAATTTTGCTGGAGGGGTACTTCCTGTTCTCTTGGTGAACACAGTTCTGTCAGTAGTTCTGCTCAAGAACATGGTGAGATCAGTGCTGGAAGCCGTTGGCGTGACATCGTCCTCGTCGTCATCTTCGCCGTCTTCATCATATTCTCAGAACACAGAGGAAGATACAGATGATGAAACAGAGAGAGAAAGTTGGAGAAGAAGGAGGGTGTCAATAACACAGTACAAGGTGTGTAGTAGAGAAGAAACAACGACGACGACCACGACGACAACACCGACAACAAGTGACTTCGGTTCGAGTGTTGGATTGGGTACGGTGGAGTGTTGCGTATGTCTGTGTGGGTTCGAAGTGAATCAGGAGGTGAGTGAATTGCCCTGTAAGCATGTCTTCCACAGAGGTTGTTTGGACAAGTGGTTTGATAACAAACACTTAACTTGTCCTCTGTGTCGTTCCACAGATTGA 480 0.4667 MGLSNIPNFAGGVLPVLLVNTVLSVVLLKNMVRSVLEAVGVTSSSSSSSPSSSYSQNTEEDTDDETERESWRRRRVSITQYKVCSREETTTTTTTTTPTTSDFGSSVGLGTVECCVCLCGFEVNQEVSELPCKHVFHRGCLDKWFDNKHLTCPLCRSTD 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1910 159 SMART ring_2 114 155 IPR001841 -
Acco04g1910 159 PANTHER - 1 158 IPR044249 -
Acco04g1910 159 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 85 159 IPR013083 -
Acco04g1910 159 SUPERFAMILY RING/U-box 113 157 - -
Acco04g1910 159 ProSiteProfiles Zinc finger RING-type profile. 114 156 IPR001841 -
Acco04g1910 159 MobiDBLite consensus disorder prediction 42 57 - -
Acco04g1910 159 MobiDBLite consensus disorder prediction 42 73 - -
Acco04g1910 159 Pfam Ring finger domain 113 156 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1910 Acco-ChrAcco04 32381413 32381892 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1910 1 157 C3H Transcription Factor Family AT2G04240 37.107 4.52e-21 82.4