Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1845 ATGTATTTATCAGAGAAACCTCGCCCTATCGATTTCTACAAAGAAGAAGGAAGTCGAGATATGATGATCGAGGTTGTCTCAAATGGAGAACTTCCTCCACCTCACCAACAACCGCCACAACATCAAATGATTCTGGGCGAAAGTAGTGGTGAGGACCACGAAGTTGAAATTAAGGCTCCCAAGAAGCGTGCTGAGACTTGGGTTCAAGACGAGACACGGAGTTTGATAGCCCTTCGCCGTGAGATGGATGGGCTTTTCAATACATCCAAGTCCAACAAGCATTTGTGGGAACAAATATCGGCTAAGATGAGAGAGAAGGGGTTTGATCGCTCGCCCACTATGTGCACGGACAAATGGAGGAATCTGTTGAAAGAATTTAAGAAGGCTAAGCACCAGGATAGGGGAAGTGGGTCTGCTAAGATGTCTTATTATAAAGAAATTGAGGATATTTTGAGGGAGAGGAATAAGAATATGCAGTACAAGAGCCCTACACCTCCTAAGGTTGATTCTTATATGCAGTTTGCAGATAAAGGTATTGATGATACCAGCATCTCTTTCGGCCCAGTTGAAGCTGGCAGACCAACACTCAATCTTGAGAGGCGTTTGGATCATGAAGGACATCCTCTTGCCATTGCTGCAGCTGATGCTGTTGCAGCAAGTGGAGTTCCTCCTTGGAATTGGAGAGAAACTCCTGGAAATGGTACGGAAGGTCAGTCATGTTGTGGGAGGGTCATATCAGTCAAATGGGGTGATTATACGAGAAGAATAGGTATAGATGGCACTTCTGATGCCATCAAGGAGGCAATAAGGGCTGCTTTTAGGTTAAGAACTAAACGTGCATTTTGGTTGGAGGATGAAGACCAGATAATCAGAAGTCTTGACCGTGACATGCCTTTAGGAAGTTACACTCTTCACCTAGACGAAGGAATGGCCATTAAAGTATACCTCTATGATGAATCTGACCATATTGCTGTTACTGAGGATAAGATCTTCTATGCTGAAGATGATTACCGTGATTTTCTGGCACGCCGGGGCTGGACATGTCTGAGGGAAGTTGATGCCTACAGAAACATTGAGAATATGGATGATCTTCGACCTGGTGCCATATACCGCGGTGTAAGTTGA 1125 0.4471 MYLSEKPRPIDFYKEEGSRDMMIEVVSNGELPPPHQQPPQHQMILGESSGEDHEVEIKAPKKRAETWVQDETRSLIALRREMDGLFNTSKSNKHLWEQISAKMREKGFDRSPTMCTDKWRNLLKEFKKAKHQDRGSGSAKMSYYKEIEDILRERNKNMQYKSPTPPKVDSYMQFADKGIDDTSISFGPVEAGRPTLNLERRLDHEGHPLAIAAADAVAASGVPPWNWRETPGNGTEGQSCCGRVISVKWGDYTRRIGIDGTSDAIKEAIRAAFRLRTKRAFWLEDEDQIIRSLDRDMPLGSYTLHLDEGMAIKVYLYDESDHIAVTEDKIFYAEDDYRDFLARRGWTCLREVDAYRNIENMDDLRPGAIYRGVS 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1845 374 Gene3D - 67 129 - -
Acco04g1845 374 FunFam trihelix transcription factor GT-1 67 129 - -
Acco04g1845 374 Pfam Myb/SANT-like DNA-binding domain 66 149 IPR044822 -
Acco04g1845 374 ProSiteProfiles Myb-like domain profile. 59 123 IPR001005 -
Acco04g1845 374 SMART sant 63 125 IPR001005 -
Acco04g1845 374 CDD GT1 65 130 - -
Acco04g1845 374 PANTHER FI21293P1 42 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1845 Acco-ChrAcco04 30341175 30345884 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1845 1 373 Trihelix Transcription Factor Family AT3G25990 68.814 0.0 511
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Acco04g1845 Myb_DNA-bind_4 7.1e-21 CL0123