Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1844 ATGGCTCTTGCTGTTGATACTCCATTGGGTATTCTCAATGCTGCTTTCTTCGTCGCTTTATTGTTATGGATTTTGATTGATAGTTTGAGAGAAAGCAGGCGTAGCGATGTTGTGTATTTGAAACACGTACCAAAACGAGTCGCCGTTTTCTCCGTAATCACGCTTTCGGTTCATGCTGTTCTTTCGGTTTTGAACTTGGCTTTTGCCTTTCATGAGTATTGGAGCGAGAAAATCGTGTCGTATTGCTCTGTTTCTTTGGCTTTCACTTGGGTTTTAGCGACTTTGGTTTCGGTGTACTCCGTGAAGAGAATACGCCACCACAACAAAACGTGGCCTCTCGTTTTGATTCTCTGGTGGTTCTTTGCCACAGTATTGGATTCAATCTTCGTTTCTCTGAAACTCTTCAAGAATTTCAAATCCTTGGATTTGTCTTTCTTTCTGTCAGAGGAAAACTTCGTGGATTTCGTTTCCTTTCCTCTGTTGTCACTTCTCTGGTTGAGTGCTCTACCTTGTGTATGGACGAGAAAATCCAGTGAATCTGAACAAGTGTTGCTTCAAAAGGAGGAAGACGAAGATGAAGAAGAAGACGATAAGGAAGCATTTTTAAATGCTGGAATATGGAGCAAGCTCACGTTTCAATGGCTGAATCCTATTTTCAGGAGAGGTCAGATGCAGAAACTTGAACTTCCCCATATACCTTCAGTTCCTCAATCTGAAACCGCAGAATATGCTTCTTCCATGCTTGAAGAATCACTGCGAAAACGAAAACTCGAGAAGGATTCACTGGCAAAAGCTATGGCTTATTTTATCCGGAAATCCTTGGCCTTGAATGCAGTATTTGCAGGTATTAATACAATGGCCTCTTACATGGGTCCCTTGTTGATCACAAACTTTGTGAATTTGTTGTCTGGAAATTATAACGATTCAAACATCCATTTCGGGCTAATTCTTGCTTTCATCTTCTTCCTGGCGAAGACTGTGGAATCACTAACTCAAAGACAATGGTACTTTGGAGCTCAACGAATAGGAATCCGAGTCCGTGCAGCTCTCACGGGTCTAATATATATCAAATCACTATCAATCAAGTGTGGGGGACTAACACAAGGCAAAATCACAAACTTCATAAATGTGGATGTTGAAAGGATCGGAGATTTCTGCTGGTACATTCATGGAGTATGGTTGCTTCCGGTTCAGGTTGTTTTGGCCTTGGTTATCTTGTACAGGAATTTAGGATTCACACCCTCCATTGCTGCATTTGCTGTTACTGTTTTAGTCATGGTTTGCAACACTCCCATGGCTAATATGCAGGAAAGTCTTCACTCCAAGATTATGGAAGCTAAGGATTCCAGGATTAAGGCTACTTCGGAGATAGTAAAGAACGTGAGGATTCTGAAATTGCATTCTTGGGAATCCACATTTCTGAAGAAGCTGTATCAACTTAGGGAAACTGAGAAGAGCTGGCTGAAGAAGTATCTTTATACTTCCTCAGCAGTGACATTTCTGTTTTGGACTGCACCAACTCTGATTTCTGTGGTCACTTTTGGTGTCTGTATAATGGTGAAAACTGAATTAACTGCAGCCACAGTGCTCTCAGCTTTAGCAACTTTTCGTATCTTACAAGAACCAATCTATAACTTACCTGAGCTTGTGTCCATGATAGCTCAAACAAAAGTGTCCATTGATAGAATCCAAGAGTTCATTAAAGAAGAGGATCAAATGCAGTTCATGACAGCGCCTACATTGAAACCTTTTGATGTTGCCATTGAGATTAAAGCAGGTGAATACTCATGGGAAGCTGATGATCAATACAATACAAAACCAACTATTCATATTACAGGGAAGTTGAAGATAGAGAAAGGTCAAAAGGTTGCAATATGTGGGTCCGTGGGGTCTGGCAAATCAAGCCTGCTATGCTGTATGCTTGGTGAGATTCCGAAGAGTTCGGGGGTAGGAATTGAAGTATATGGAAATAAAAGTTATGTGCCCCAAAGTCCTTGGATTCAATCAGGGTCTGTAAGAGAGAATATACTGTTTGGCAGGAAAATGAACATGGAATTGTATGAGAAAGTCCTGGAATGTTGTGCATTGCATCAGGATATCAAACAGTGGGAAGATGGAGATTTGACCATGGTGGGGGAGAGGGGCATAAACTTAAGTGGAGGCCAAAAACAGAGAATTCAACTGGCAAGGGCTGTTTACAATGATTCAGATATTTATTTCCTAGATGATCCTTTCAGTGCTGTTGATGCTCATACTGGGACTCATTTATTTAAGAAATGTCTCTTGGAACTTCTATCTGAGAAAACTGTTGTTTATGCTACCCATCAACTAGAATTTTTGGAAGATGCTGATCTTGTCTTGGTAATGAAAGATGGGAAAATAGTTGAGTCAGGAAAGTATAAAGATCTGATAGCTTGTCACAGTTGTGAACTTGTTGATCAAATGGCTGCTCATAAGGAAACAATAAAGCAAATCAGACCATGTTGCGAGGATAATTCCTTATCCAAGAACTGTAGACCATTTTCAACGCCCCAAATTGAAGTAGCTGAAACAAACCTTGCCATGTACCTTGAAGAAAACAAGAATTTGGAGAGAAACAAACAAGAGAAATCAGAGACGGGTCGAGTTGATTGGAGTGTTTACTCAACTTTTGTCACCTTTGCTTATAAAGGTGCATTAGTTCCCGTTATTCTCCTATGCCAAATTGTCTTTCAAGGAATGCAAATGGGAAGCAATTATTGGATTGCTTGGGCTGCAGAGCAAAGAAACAATGTTAGTAAAGGAACGCTTATGGGGACCTTTGTTTTGCTATCTGGTGGCAGTTCCGTCTTTATATTGGGAAGAGCTTTGTTCATGGCAAAAATTGCTGTAGAGACAGCTCAACGTCTTTATCACGAAATGATTACATCAGTTTTCAGAGCTCCGATTCCTTTTTTTGATACTACTCCTTCAAGCAGGATCTTGAATAGGTGTTCCACAGATCAAAGTACAGTAGATACAGATATACCATACAGACTAGCTGGACTTGTATTTGCACTCATCCAGTTATTGAGTATCATCATTTTAATGTCCCAAGTTGCTTGGCAAGTCATTATTTTCTTCATTGTGGTGCTTTCAATCTCCATCTGGTATCAGGCTTATTACATTACTACAGCTAGAGAATTGGCCAGGATGGTAGGGATCAGGAAGGCTCCAATCTTGCATCACTTTTCAGAATCAATTTCTGGGGTGGCCACAATTCGTTGTTTCAATCAACAGCAAAGATTTTATACGAAAGTTATGGCTCTAGCTGATGATTATTCTCGTGTGGCGTTTCATAATTATGCCACCATGGAATGGTTGTCTGTTAGGATAAACTCTCTGTTTAATCTAGTCTTCTTTTTCGTGCTCATCATCTTGGTTACACTGCCAAGGCCTGGCATTGATCCCAGCTTGGCAGGTCTGGTAGCTACTTATGGTTTGAACTTAAGTGTTCTTCAGGCTTGGGTAATATGGAACCTCTGCAATGTGGAGAACAAAATGATATCAGTAGAGAGGATACTACAATTCACTAAGATACCAAGTGAAGCTCCACTGATAATCCAAGATTGTAGGCCCCAACTAGAGTGGCCCAGGGAGGGAAAAATTGAGCTTCACAATCTTCACATACAGTATGATCCTGCAGCTCCCATGGTTCTTAAAGGTGTCACTTGCACCTTTCCAGGACAAGAGAAGATTGGAGTTGTAGGGAGGACTGGAAGTGGAAAATCCACCTTAGTGCAAGCTCTCTTCCGAGTGGTGGAACCTTCAGCAGGACGTGTACTTATCGACAGCATAGATATTTGCAAGATTGGCCTCAAGGACTTAAGATCTAGGCTTGGTATTATCCCTCAAGATCCTACCTTGTTTCAAGGTACTGTAAGGAACAACTTGGATCCTTTAGAACAACACTCAGATCAAGAACTTTGGGAGGTGCTCGGTAAGTGCCATCTTGGTGATATAGTTAGGAAGGATCCAAGGCTTCTAGATGCATCAGTGGCTGAGAACGGAGAGAATTGGAGTGTCGGACAAAGGCAGCTTGTTTGTCTTGCCCGGCTGCTATTGAAGAAAAGAAGAATTTTGGTTCTTGATGAAGCTACTGCTTCGATTGACACAGCGACCGATAATTTAATTCAGAAGACCATTAGGGAAGAGACAAGTGAATGCACAGTCATTACAGTGGCTCATAGGATTCCTACAGTAATTGATAATGATCGTGTATTGGTCCTTGATGAAGGGAGGATTGCTGAGTTTGATCAACCGGCTAAATTGCTAGAGAACAATTCATCATCATTCTCAAAGCTAGTATCAGAATTTTTGAGGAGATAA 4347 0.4104 MALAVDTPLGILNAAFFVALLLWILIDSLRESRRSDVVYLKHVPKRVAVFSVITLSVHAVLSVLNLAFAFHEYWSEKIVSYCSVSLAFTWVLATLVSVYSVKRIRHHNKTWPLVLILWWFFATVLDSIFVSLKLFKNFKSLDLSFFLSEENFVDFVSFPLLSLLWLSALPCVWTRKSSESEQVLLQKEEDEDEEEDDKEAFLNAGIWSKLTFQWLNPIFRRGQMQKLELPHIPSVPQSETAEYASSMLEESLRKRKLEKDSLAKAMAYFIRKSLALNAVFAGINTMASYMGPLLITNFVNLLSGNYNDSNIHFGLILAFIFFLAKTVESLTQRQWYFGAQRIGIRVRAALTGLIYIKSLSIKCGGLTQGKITNFINVDVERIGDFCWYIHGVWLLPVQVVLALVILYRNLGFTPSIAAFAVTVLVMVCNTPMANMQESLHSKIMEAKDSRIKATSEIVKNVRILKLHSWESTFLKKLYQLRETEKSWLKKYLYTSSAVTFLFWTAPTLISVVTFGVCIMVKTELTAATVLSALATFRILQEPIYNLPELVSMIAQTKVSIDRIQEFIKEEDQMQFMTAPTLKPFDVAIEIKAGEYSWEADDQYNTKPTIHITGKLKIEKGQKVAICGSVGSGKSSLLCCMLGEIPKSSGVGIEVYGNKSYVPQSPWIQSGSVRENILFGRKMNMELYEKVLECCALHQDIKQWEDGDLTMVGERGINLSGGQKQRIQLARAVYNDSDIYFLDDPFSAVDAHTGTHLFKKCLLELLSEKTVVYATHQLEFLEDADLVLVMKDGKIVESGKYKDLIACHSCELVDQMAAHKETIKQIRPCCEDNSLSKNCRPFSTPQIEVAETNLAMYLEENKNLERNKQEKSETGRVDWSVYSTFVTFAYKGALVPVILLCQIVFQGMQMGSNYWIAWAAEQRNNVSKGTLMGTFVLLSGGSSVFILGRALFMAKIAVETAQRLYHEMITSVFRAPIPFFDTTPSSRILNRCSTDQSTVDTDIPYRLAGLVFALIQLLSIIILMSQVAWQVIIFFIVVLSISIWYQAYYITTARELARMVGIRKAPILHHFSESISGVATIRCFNQQQRFYTKVMALADDYSRVAFHNYATMEWLSVRINSLFNLVFFFVLIILVTLPRPGIDPSLAGLVATYGLNLSVLQAWVIWNLCNVENKMISVERILQFTKIPSEAPLIIQDCRPQLEWPREGKIELHNLHIQYDPAAPMVLKGVTCTFPGQEKIGVVGRTGSGKSTLVQALFRVVEPSAGRVLIDSIDICKIGLKDLRSRLGIIPQDPTLFQGTVRNNLDPLEQHSDQELWEVLGKCHLGDIVRKDPRLLDASVAENGENWSVGQRQLVCLARLLLKKRRILVLDEATASIDTATDNLIQKTIREETSECTVITVAHRIPTVIDNDRVLVLDEGRIAEFDQPAKLLENNSSSFSKLVSEFLRR 1448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1844 1448 SUPERFAMILY ABC transporter transmembrane region 896 1191 IPR036640 GO:0005524|GO:0016020
Acco04g1844 1448 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1201 1435 IPR027417 -
Acco04g1844 1448 Gene3D - 1192 1444 IPR027417 -
Acco04g1844 1448 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 275 555 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco04g1844 1448 CDD ABC_6TM_ABCC_D1 276 563 IPR044746 GO:0140359
Acco04g1844 1448 Pfam ABC transporter transmembrane region 276 542 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco04g1844 1448 Pfam ABC transporter transmembrane region 911 1136 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco04g1844 1448 Pfam ABC transporter 614 745 IPR003439 GO:0005524
Acco04g1844 1448 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 203 1442 - -
Acco04g1844 1448 CDD ABCC_MRP_domain2 1207 1427 - -
Acco04g1844 1448 SMART AAA_5 619 801 IPR003593 GO:0016887
Acco04g1844 1448 SMART AAA_5 1235 1428 IPR003593 GO:0016887
Acco04g1844 1448 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 590 816 IPR003439 GO:0005524
Acco04g1844 1448 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 612 807 IPR027417 -
Acco04g1844 1448 CDD ABC_6TM_ABCC_D2 894 1184 IPR044726 GO:0140359
Acco04g1844 1448 Gene3D - 577 831 IPR027417 -
Acco04g1844 1448 FunFam Multidrug resistance-associated protein 4 576 833 - -
Acco04g1844 1448 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1209 1443 IPR003439 GO:0005524
Acco04g1844 1448 ProSitePatterns ABC transporters family signature. 718 732 IPR017871 GO:0005524|GO:0016887
Acco04g1844 1448 SUPERFAMILY ABC transporter transmembrane region 270 571 IPR036640 GO:0005524|GO:0016020
Acco04g1844 1448 Gene3D ABC transporter type 1, transmembrane domain 856 1190 IPR036640 GO:0005524|GO:0016020
Acco04g1844 1448 Gene3D ABC transporter type 1, transmembrane domain 250 572 IPR036640 GO:0005524|GO:0016020
Acco04g1844 1448 FunFam ABC transporter C family member 5 857 1190 - -
Acco04g1844 1448 Pfam ABC transporter 1226 1374 IPR003439 GO:0005524
Acco04g1844 1448 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 896 1172 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco04g1844 1448 Coils Coil 846 873 - -
Acco04g1844 1448 CDD ABCC_MRP_domain1 588 793 - -
Acco04g1844 1448 FunFam ABC transporter C family member 3 1192 1444 - -
Acco04g1844 1448 FunFam ABC transporter C family member 10 258 571 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1844 Acco-ChrAcco04 30220247 30225857 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1844 1194 1442 Calmodulin-binding Proteins AT2G36910 31.298 1.14e-31 133