Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1842 ATGGGTGTATTTTCTCTTCTGATTTTACTTATATTTTATCTTCTAATTTCATCTGCAGTATGCCAAGTTCAAGAGTTCATTAGCATTGACTGTGGAGGAACAAGTAATTACACTGATAAAAGCACAGGACTGCCATGGATTTCAGACAATGGGATTATGAACCATGGAAATCCAGTGGAAGTAGAAGGTCCAAATGGAAACAAAATACAGTATCAGAAAAGGAGAGACTTCCCAATAGACAGCAGGAAATATTGTTACACACTAAAAACTGAGGAGAGAAGAAGATATTTGGTGCGAGCAACCTTTCAGTATGGAAATTTGAAAAGTGGAGACACTTACCCTCAGTTTCAGCTCTATTTGGATGCTACTAAATGGGCCACTGTGTCAATTTATGATGCCTCAAGAGTTCATGTGAAGGAAATGATCATAAGGGCACCTTCAAACTCTCTTGATGTGTGCTTGTGTTGTGCTACCACTGGTTCACCATTCATATCAACTCTAGAGCTAAGGCCTTTGAATCTTTCTATGTATGCCACAGATTTTGAAGACGATTTCTTCCTAAAAGTTGCTGCAAGAATCAATTTTGGCGCTTCAAGTGAGGATCCTATCAGGTACCCTGATGACCCATATGATAGAATTTGGGCATCAGATCTTGTGAAAAGGCAAAACTATCTTGTTGGGGTGGCCCCAGGAACAGAAAGGATTAATACAACAAAGAACATAGAGATAGGAAGTAGAGAGTATCCACCAGTCAAAGTTATGCAAACTGCAGTTGTTGGTACAAAAGGGGTACTCAGCTACAGAACAAACCTGGAAGACTTTCCTGCCAATGCTCGAGCCTATGCGTATTTCGCGGAGATTGAAGATCTCAGTAACAATGAGACTCGAAAATTCAAAATGGAGCAACCTTTTATACCTGATTATAGCAATGCAGTGGTTAACATAGCTGAGAATGCCAACGGGAGCTACACTCTTTATGAACCTAGTTACATGAATGTAACTCTGGATTTTGTTCTGTCATTCTCCTTTGTTAAGACCCGGGATTCGACTCGAGGGCCACTTCTAAATGCAATGGAAATAAGCAAATACCAACTGATTGCTTCAAAGACTGACAGGCAAGATTTGACTGTTGTAAATGAATTTTCCTCCATGTCTGCTGAAAGTGTTCAGAAGAATGAAGGTGATCCTTGTGTTCCAACTCCCTGGGAGTGGGTAAATTGTAGTGCTGCCACATTTCCAAGAATCACAAAAATAAACCTGTCAAGAAGGAATGTTACAGGCACAATGCCATCTGACATTAAGAACATGGAAGAACTGACAGAATTGTGGTTAGATGGAAACCTGATTACAGGACCACTGCCTGACATGAGCAATCTTATCAATCTAAAGATTGTGCATCTAGAGAACAACCAATTGAGTGGTCCATTACCATCTTACCTGGGTAGTATGCCAAGTTTAGAAGCACTATTCATACAAAATAACTCGTTTATTGGGGAAATACCAGCAGGATTACTATCTGGAAAAATCATTTTCACCTATGATGGTAATCCTGGACTACATAAAGGGACGAAGAAACCCTTCAAGTTGATACTGGGGATTTCAATAGGAGCTCTTGTGATTCTAGCAATATTATTTTTAGGAAGTTTGATGCTGATGCATAATCTTCGAAAGGAGTCTCAACAGAAGTGTGATGAAAATGGTATCTCTGGACGCAGTATGACCAAACCTATTGGTCCATACTCACTCGTTGGGGGAGGGAGTCTAATGGATGAAGGTATTGCATGCTATATTGGGCTCTCAAACTTGAAAGAAGCTACTAATAATTTTGCAAAGAAAATTGGCAAAGGAAGCTTTGGATCTGTCTACTATGGGAAAATGAAAGATGGAAAAGAAGTTGCTGTTAAAATTATGAGTGATTCATCCACCTATGGGGACCATCAATTTGTGACTGAGGTAGCCCTTCTGTCAAGAATTCATCACAGAAACTTGGTTCCTTTGATTGGATATTGTGAAGAAGAATGTCAGCGTATTCTGGTTTACGAGTATATGCACAATGGCACCTTGCGGGATCACATTCATGGTCCTGCTAAGCAGAACAACTTAGATTGGTTAGTTCGTCTTCGTATAGCAGAAGATGCAGCTAAAGGTCTAGAATACTTACATACAGGATGCAATCCAAGTATCATACACCGAGATGTGAAGACCAGCAATATACTTCTGGACATCAATATGAGAGCGAAAGTGTCAGACTTTGGACTCTCAAGATTAGCTGAAGAAGATTTAACTCACGTATCAAGTATTGCCAGGGGAACTGTAGGTTACTTGGATCCTGAGTACTATGCAACCCAGCAATTGACAGAGAAGAGCGATGTATACAGCTTCGGAGTTGTACTTCTTGAACTGATCGCTGGAAGAAAGCCCGTATCGTCGGAAGATTACGGTGCCGAAATGAACATCGTTCACTGGGCGAGGTCGTTGATTCGCAAAGGCGACGTGATGAGCATCACGGATCCATGTTTAATAGGGAACGTGAAAACCGAATCGATTTGGAGAATCGCTGAAATCGCACTCCAATGCGTAGAACAACACGGGGCATGCAGGCCAAGGATGCAAGAGATAATTCTGGAAATACAAGAAGCAATCAACATTGAGAAAGGAACGAACAGTAACACGAAATTATCATCCACAGGTAGTTCGAATGCTCAACCTTCGAGAAAAACTTTACTCACAAGCTTTCTTGAAATTGAGAGCCCTGACTTGCCCAATAGTTGCCTCCCTACCGCAAGATAA 2790 0.409 MGVFSLLILLIFYLLISSAVCQVQEFISIDCGGTSNYTDKSTGLPWISDNGIMNHGNPVEVEGPNGNKIQYQKRRDFPIDSRKYCYTLKTEERRRYLVRATFQYGNLKSGDTYPQFQLYLDATKWATVSIYDASRVHVKEMIIRAPSNSLDVCLCCATTGSPFISTLELRPLNLSMYATDFEDDFFLKVAARINFGASSEDPIRYPDDPYDRIWASDLVKRQNYLVGVAPGTERINTTKNIEIGSREYPPVKVMQTAVVGTKGVLSYRTNLEDFPANARAYAYFAEIEDLSNNETRKFKMEQPFIPDYSNAVVNIAENANGSYTLYEPSYMNVTLDFVLSFSFVKTRDSTRGPLLNAMEISKYQLIASKTDRQDLTVVNEFSSMSAESVQKNEGDPCVPTPWEWVNCSAATFPRITKINLSRRNVTGTMPSDIKNMEELTELWLDGNLITGPLPDMSNLINLKIVHLENNQLSGPLPSYLGSMPSLEALFIQNNSFIGEIPAGLLSGKIIFTYDGNPGLHKGTKKPFKLILGISIGALVILAILFLGSLMLMHNLRKESQQKCDENGISGRSMTKPIGPYSLVGGGSLMDEGIACYIGLSNLKEATNNFAKKIGKGSFGSVYYGKMKDGKEVAVKIMSDSSTYGDHQFVTEVALLSRIHHRNLVPLIGYCEEECQRILVYEYMHNGTLRDHIHGPAKQNNLDWLVRLRIAEDAAKGLEYLHTGCNPSIIHRDVKTSNILLDINMRAKVSDFGLSRLAEEDLTHVSSIARGTVGYLDPEYYATQQLTEKSDVYSFGVVLLELIAGRKPVSSEDYGAEMNIVHWARSLIRKGDVMSITDPCLIGNVKTESIWRIAEIALQCVEQHGACRPRMQEIILEIQEAINIEKGTNSNTKLSSTGSSNAQPSRKTLLTSFLEIESPDLPNSCLPTAR 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1842 929 Pfam Malectin-like domain 29 362 IPR024788 -
Acco04g1842 929 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 408 500 - -
Acco04g1842 929 SUPERFAMILY Protein kinase-like (PK-like) 599 874 IPR011009 -
Acco04g1842 929 Pfam Protein tyrosine and serine/threonine kinase 609 875 IPR001245 GO:0004672|GO:0006468
Acco04g1842 929 Gene3D Ribonuclease Inhibitor 368 513 IPR032675 -
Acco04g1842 929 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 683 890 - -
Acco04g1842 929 SUPERFAMILY L domain-like 398 504 - -
Acco04g1842 929 SMART serkin_6 607 881 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g1842 929 PANTHER OS07G0107800 PROTEIN-RELATED 456 881 - -
Acco04g1842 929 ProSitePatterns Serine/Threonine protein kinases active-site signature. 728 740 IPR008271 GO:0004672|GO:0006468
Acco04g1842 929 Gene3D Phosphorylase Kinase; domain 1 592 682 - -
Acco04g1842 929 ProSiteProfiles Protein kinase domain profile. 607 881 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g1842 929 Gene3D Transferase(Phosphotransferase) domain 1 683 901 - -
Acco04g1842 929 ProSitePatterns Protein kinases ATP-binding region signature. 613 635 IPR017441 GO:0005524
Acco04g1842 929 FunFam serine/threonine-protein kinase PBS1-like 588 682 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1842 Acco-ChrAcco04 30175555 30182416 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1842 1 929 Receptor kinase-like Gene Family AT1G67720 67.489 0.0 1266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Acco04g1842 Malectin_like 3.3e-89 CL0202