Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1794 ATGGTCGTTTGGTGCTGTGAAGTAAATCTCGAGCAGGCTCTTCAGTTCCGTACGAGATTGGATACCATGCAACCTGGTTACAATATTAATGATCTGTACCAAGAAGCTCAAACACGATGGCTGAAGCCTGTAGAAGTGATGTACATTTTACAGAATCATGAAAAGTATCAGATTACTCAAGAGACCCCACAACAACCACACAGTGGATCCTTGTTTCTGTTTAACAAAAGAGTTCTGCGCTTTTTTCGTAAAGATGGTCATAATTGGCGGAAGAAAAAAGATGGAAGAACTGTGGGAGAAGCGCATGAACGACTTAAGGTTGGAAATGTTGAGGCCTTAAATTGTTATTATGCACATGGAGAGCAGAACCCTACTTTTCAGAGGCGGAGCTATTGGATGTTGGATCCGGCTTTTGAGCATATTGTTCTCGTACACTACAGAGAAACAAGTGACGGAAGGTCAAATTCTGGACCTGGTACACGACAGTCGCCAGGACCCTCATCTACATTTAGTCAGAGTCCTAGCTCATACACTACCCAGAAGCTGGGGTCAGCATCCATGTTTGGTGATTCATGTGAACCTAATCAGAGTTTCTCCAGTCCTGGATCGGTAGAATTCGCATCTGATATAGTCGTCAAGAATAATGGAAAGGATCACTTGGATGGAACAGAGGCAGAGTCAGGAAATTCAACTGAACATGAGGTTACTCAAGCTCTGCGCCGACTGGAGGAGCAGTTAAGTCTGAATGAGGACAGCTTCGAAGAAATTGGTTCCTTCAGCGGCGAGCAGGAGAATGCACATGATTCTAGCCCGCAACAAAATACAATGGCAATCAGCAATGAACCAGATGTTAATGCAGCTTGGCCTGCACTGAGCGATCATGGCCAATCTTATGATTGGCGTAGTTCGAGACAAGACCATAATTGCTCTGATGGAATTGAGAAGACTTTGTACTGGAAGGAGATGTTGGATTCATGCAAGCCCTTGTCCCCATCCAGTTTGCAAGAGAAACACATGTACAGACCAGCTGGAAATGAAAACTCACTCTCATCTTCAGGAACCATACCAATTGCTAACCATGAAAGCAGTCACTGGATAAGCTTTGGCCGTAATAATGCTGAAAACTCTGCCTTTTCACTGACTCAAGACATTCATGGAATCGGATTTTCTCCTTATTCCTCTATAGAAACTCAAGAAGCTAATTTGGACTGTTATGCATCATTTTTTGAGCAAAACCAAATTGAAGCACCTCTGGATGTTGATTTAAGTTTGACCGTTGCACAAAAGCAGAAGTTCACAATTAAGGAAGTATCTCCAGAATGGGGTTATGCTACTGAAGCCACAAAGGTTATAATTGTTGGATCATTTCTATGTCTTCCCACGAGTTCTACCTGGGCTTGTATATTTGGTGAACATGAAGTTCCTGTTGAAATAATTCAAGATGGTGTGATCCGCTGTGAAGCTCCATCTCACCTTGCTCCTGGAAAGGTTACTCTCTGCATTACCTCTGGGAATCGTGAGTCCTGCAGTGAAGTTCGTGAGTTTGAGTATCGCAATAAGGATAGTTGCCCTCACTGCAATTCATTAGAAACAGAATCCACTAGAAGTCCTGAAGAACTGTTATTACTTGTTAGATTTGCGCAGATGATCCTTTCCAATTCTTCTATGACAGAATCTGGAAATTATGAACTGGGAAAACAGAAATACGATGATGATTCATGGAGCCATGTTATTGAGGCTCTTCTAGTTGGCAGTGGAACTTCATCTGGTACTGTTGATTGGCTTCTTGAAGAGCTTCTAAAGGATAAGCTGCAGTTGTGGCTTTACTCCGGATCCCACAAAAGAAATGAAGAGACAGGCTCTTCTTTGTCCAAAAAGGAGCAGGGCATTATACACATGGTTGCTGGGTTGGGTTTTGAGTGGGCTTTGAGCCCCATTCTCAGCTGTGGTGTGAACATAAATTTCCGTGACATCAATGGTTGGACTGCCCTGCATTGGGCTGCACGCTTTGGGAGGGAAAAAATGGTCGCTTCACTTGTAGCTTCTGGTGCATCTGCTGGAGCAGTGACAGATCCAACTACCCAAGATCCAACTGGTAAAACGGCTGCTTCTATTGCAGCCAACAGTGGGCATACGGGTCTGGCAGGTTATCTTTCAGAGGTATCTCTAACAAGCCATTTATCTTCCCTCACCCTGGAAGAATGTGAGCTGTCTAAAGGTTCGGCTGAGGTTGAAGCAGAGTTAACTGTAAGTACTGTCTCCAAGGAGCATCTAACAGCCAGTGAAGATCAGATTTCACTTAAACATACCTTGGCTGCTGTGCGTAATGCAGCTCAAGCAGCTGCACGTATACAGTCTGCTTTTCGTGCACATTCCTTTAAGAAACGGAGAGAGAGAGAAGCTGCCATTTCTGCAGCAGCCGCCATATCAATTCAGAAGAAATATCGAGGATGGAAAGGCCGTAAAGATTTTTTAGCATTACGCAAGAAAGTAGTGAAGATACAGGCTCATGTAAGGGGTTACCAGGCTAGAAAGCATTACAGGATAATATGTTGGGTAGTTGGGTTCTTTGACAAGGCTGTGCTACGATGGAAGAGGAAAGGAACTGGTTTAAGAGGTTTTCGACAGGAGAAAAACTCAATTGATGAAAATGAAGATGAAGATATTCTCAAGGTGTTCCGAAAACAGAAAGTAGATGAAGCTGTTGAACAGGCTGTTTCACGGGTGCTGTCCATGGTAGATTCTCCAAATGCTCGTCAACAATATCATCGCATGCTTGAAAAGTTTCGTCAAGCTAAGGCTGAACTCGGCAGCACAAGTCAAGGAGTACCGGTATCTTTTCTGAAGGATGCTTCCAATATGGAAGATGACGACTTAAATCAGTTCCCTAGTTCTTAG 2898 0.4365 MVVWCCEVNLEQALQFRTRLDTMQPGYNINDLYQEAQTRWLKPVEVMYILQNHEKYQITQETPQQPHSGSLFLFNKRVLRFFRKDGHNWRKKKDGRTVGEAHERLKVGNVEALNCYYAHGEQNPTFQRRSYWMLDPAFEHIVLVHYRETSDGRSNSGPGTRQSPGPSSTFSQSPSSYTTQKLGSASMFGDSCEPNQSFSSPGSVEFASDIVVKNNGKDHLDGTEAESGNSTEHEVTQALRRLEEQLSLNEDSFEEIGSFSGEQENAHDSSPQQNTMAISNEPDVNAAWPALSDHGQSYDWRSSRQDHNCSDGIEKTLYWKEMLDSCKPLSPSSLQEKHMYRPAGNENSLSSSGTIPIANHESSHWISFGRNNAENSAFSLTQDIHGIGFSPYSSIETQEANLDCYASFFEQNQIEAPLDVDLSLTVAQKQKFTIKEVSPEWGYATEATKVIIVGSFLCLPTSSTWACIFGEHEVPVEIIQDGVIRCEAPSHLAPGKVTLCITSGNRESCSEVREFEYRNKDSCPHCNSLETESTRSPEELLLLVRFAQMILSNSSMTESGNYELGKQKYDDDSWSHVIEALLVGSGTSSGTVDWLLEELLKDKLQLWLYSGSHKRNEETGSSLSKKEQGIIHMVAGLGFEWALSPILSCGVNINFRDINGWTALHWAARFGREKMVASLVASGASAGAVTDPTTQDPTGKTAASIAANSGHTGLAGYLSEVSLTSHLSSLTLEECELSKGSAEVEAELTVSTVSKEHLTASEDQISLKHTLAAVRNAAQAAARIQSAFRAHSFKKRREREAAISAAAAISIQKKYRGWKGRKDFLALRKKVVKIQAHVRGYQARKHYRIICWVVGFFDKAVLRWKRKGTGLRGFRQEKNSIDENEDEDILKVFRKQKVDEAVEQAVSRVLSMVDSPNARQQYHRMLEKFRQAKAELGSTSQGVPVSFLKDASNMEDDDLNQFPSS 965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1794 965 Gene3D - 576 724 IPR036770 -
Acco04g1794 965 ProSiteProfiles Ankyrin repeat region circular profile. 659 685 - -
Acco04g1794 965 ProSiteProfiles IQ motif profile. 777 806 IPR000048 GO:0005515
Acco04g1794 965 ProSiteProfiles CG-1 DNA-binding domain profile. 29 155 IPR005559 GO:0003677
Acco04g1794 965 SMART iq_5 826 848 IPR000048 GO:0005515
Acco04g1794 965 SMART iq_5 803 825 IPR000048 GO:0005515
Acco04g1794 965 SMART iq_5 776 798 IPR000048 GO:0005515
Acco04g1794 965 SUPERFAMILY Ankyrin repeat 628 720 IPR036770 -
Acco04g1794 965 Gene3D - 804 850 - -
Acco04g1794 965 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 28 935 - -
Acco04g1794 965 SUPERFAMILY E set domains 433 518 IPR014756 -
Acco04g1794 965 Gene3D Immunoglobulins 427 522 IPR013783 -
Acco04g1794 965 Pfam CG-1 domain 35 148 IPR005559 GO:0003677
Acco04g1794 965 ProSiteProfiles Ankyrin repeat profile. 659 691 IPR002110 GO:0005515
Acco04g1794 965 SMART ANK_2a 659 688 IPR002110 GO:0005515
Acco04g1794 965 SMART ANK_2a 698 727 IPR002110 GO:0005515
Acco04g1794 965 Pfam IPT/TIG domain 433 517 IPR002909 -
Acco04g1794 965 Pfam Ankyrin repeats (3 copies) 646 719 IPR002110 GO:0005515
Acco04g1794 965 FunFam Calmodulin-binding transcription activator 2 803 851 - -
Acco04g1794 965 Pfam IQ calmodulin-binding motif 828 848 IPR000048 GO:0005515
Acco04g1794 965 Pfam IQ calmodulin-binding motif 806 824 IPR000048 GO:0005515
Acco04g1794 965 CDD IPT 433 518 - -
Acco04g1794 965 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 781 853 IPR027417 -
Acco04g1794 965 ProSiteProfiles IQ motif profile. 827 851 IPR000048 GO:0005515
Acco04g1794 965 ProSiteProfiles IQ motif profile. 804 833 IPR000048 GO:0005515
Acco04g1794 965 MobiDBLite consensus disorder prediction 149 201 - -
Acco04g1794 965 FunFam Calmodulin-binding transcription activator 4 isoform A 541 724 - -
Acco04g1794 965 SMART CG_1_2 32 150 IPR005559 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1794 Acco-ChrAcco04 26600461 26615307 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1794 319 963 CAMTA Transcription Factor Family AT1G67310 55.087 0.0 665
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Acco04g1794 CG-1 1.7e-49 No_clan