Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1763 ATGGGCTGTTTCTCTTGTTTCGATTCGAAGGAGGATGAGCAGCTCAACCCTCGGCAACAAAACGATGATCTTACGCAAGGCCATCCACCTGCTTCTTCTCACATTTCCAGATTACCCTCTGGACCAGACAAGCTTCGCTCAAGGAGTAGTAATGGAGGATCCAAAAGGGAACTGCCTTCTCCCAAGGATGGGCCTGGTGTCCAAATTGCTGCCCAAACTTTCACTTTCCGTGAACTTGCAGCTGCAACTAAAAATTTTAGGCCAGAATCCTTTATAGGGGAAGGTGGTTTTGGAAGGGTATATAAAGGACGTCTAGAAAGCACGGGTCAGGTTGTTGCCGTTAAACAATTAGATAGAAATGGCCTTCAGGGAAATCGAGAATTCCTAGTGGAGGTTCTCATGCTTAGTCTTCTACATCATCCTAACCTTGTCAATCTTATTGGTTACTGTGCTGATGGGGACCAACGTCTCCTTGTTTATGAATTTATGCCATTGGGATCATTGGAAGACCATCTTCATGATCTTCCCCCTGACAAGGAACCACTAGATTGGAACACTCGGATGAAAATAGCAGCCGGTGCAGCAAAAGGATTGGAATACTTGCATGACAAGGCAAATCCCCCAGTTATTTATAGGGACTTCAAGTCATCTAATATATTACTAGATGAAGGATTTCATCCCAAGCTTTCTGACTTTGGTCTTGCAAAGCTTGGTCCAGTTGGTGATAAGTCGCATGTTTCCACCAGGGTCATGGGAACTTATGGTTACTGTGCTCCTGAGTATGCCATGACTGGACAACTGACGGTGAAATCTGATGTCTATAGTTTTGGGGTAGTCTTCCTAGAGTTGATTACCGGCCGGAAAGCCATTGACAGTACCCAGCCTCATGGAGAACAGAACCTGGTTACCTGGGCACGTCCACTGTTCAATGACCGCAGGAAGTTTTCAAAATTGGCGGATCCCCGGCTTCAGGGACGGTATCCCATGCGGGGTCTTTACCAGGCATTAGCTGTGGCATCAATGTGCATCCAAGAACAGGCTGCCACAAGGCCCTTGATCGGAGATGTGGTAACGGCTCTATCATATCTGGCCAACCAGGCGTACGACCCTAATTCATCTGGGCACGGTCATAGGGTTTTGGGTGATGATAAAAGGAGCAGAGACGAAAGAGGGGGAAGGATATCCAGAAATGAGGAAGGTGGAGGATCCGGCCGCAAATGGGACCTTGAAGGGTCTGAGAAAGAGGACTCCCCACGAGAAACTGCAAGGATGTTAAACAGGGACCTAGATAGAGAACGCGCGGTGGCTGAAGCCAAGATGTGGGGAGAGAACTGGAGAGAGAAAAGACGGCAAAATGGTCAGGCCAATTTTGACGCGTCCAATGCGTAG 1389 0.4795 MGCFSCFDSKEDEQLNPRQQNDDLTQGHPPASSHISRLPSGPDKLRSRSSNGGSKRELPSPKDGPGVQIAAQTFTFRELAAATKNFRPESFIGEGGFGRVYKGRLESTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLDEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSTQPHGEQNLVTWARPLFNDRRKFSKLADPRLQGRYPMRGLYQALAVASMCIQEQAATRPLIGDVVTALSYLANQAYDPNSSGHGHRVLGDDKRSRDERGGRISRNEEGGGSGRKWDLEGSEKEDSPRETARMLNRDLDRERAVAEAKMWGENWREKRRQNGQANFDASNA 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1763 462 CDD STKc_IRAK 92 360 - -
Acco04g1763 462 Pfam Protein kinase domain 89 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g1763 462 FunFam Serine/threonine-protein kinase PBS1 60 162 - -
Acco04g1763 462 MobiDBLite consensus disorder prediction 376 453 - -
Acco04g1763 462 FunFam Serine/threonine-protein kinase PBS1 163 378 - -
Acco04g1763 462 ProSiteProfiles Protein kinase domain profile. 86 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g1763 462 MobiDBLite consensus disorder prediction 367 462 - -
Acco04g1763 462 MobiDBLite consensus disorder prediction 19 33 - -
Acco04g1763 462 MobiDBLite consensus disorder prediction 1 67 - -
Acco04g1763 462 ProSitePatterns Protein kinases ATP-binding region signature. 92 115 IPR017441 GO:0005524
Acco04g1763 462 Gene3D Phosphorylase Kinase; domain 1 70 162 - -
Acco04g1763 462 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
Acco04g1763 462 PANTHER OS07G0668900 PROTEIN 3 372 - -
Acco04g1763 462 SUPERFAMILY Protein kinase-like (PK-like) 70 358 IPR011009 -
Acco04g1763 462 Gene3D Transferase(Phosphotransferase) domain 1 163 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1763 Acco-ChrAcco04 25399820 25404556 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1763 1 363 Glycoside Hydrolase AT3G07070 65.289 5.04e-173 490
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Acco04g1763 Pkinase 2.8e-45 CL0016