Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1757 ATGGAAACGGAAGAGAAGAAGCTGAGTTTTGTGAGAAATGGTGAGTTGAGATTACCACCTGGGTTTCGATTTCACCCAACAGACGAAGAACTTGTGGTCCAATACTTGAAGCGAAAGGTCTTGTCTTATCCATTGCCTGCTTCAATCATCCCTGAGGTTCATGTCTGCAAATCGGATCCTTGGGACTTGCCAGGTGATATGGAACAGGAGAGATATTTCTTTAGTACCAGAGAAGCTAAGTACTCTAACGGAAGTCGATCTAACAGAGCAACACATTCTGGGTATTGGAAAGCCACTGGTCTGGACAAGCAAATATTGACTTCAAAGGGGAATCAAGTTGTGGGCATGAAGAAAACTCTGGTTTTCTACAGAGGCAAGCCTCCTCATGGCTCTAGAACTGACTGGATCATGCACGAATATCGCCTTCATAATATACAGAGCTCTGAAGCGGGGATGCAGAACTGGGTACTCTGTCGCATATTCTTGAAGAGAAGAAGCACAAACGGGAAAAGTGAGGAACAGAGTAGTTTCAGAGTAAGGAGGGACATTATTGACGGTCACTACAAGTCAAGGCCTGTTTTTTATGACTTCTTAGCACAGGGCAAGAACAATAATAAGAATATTTGTAATACTGATTTGAATCGCACACCTTCGACTTCAACCTCAAGCATAAGTGGAATTACTCATCTCTCTTCTCACGAATCTGATGAGCGTGGTGAAGAAAGCAGTAGTTGCAACAGCCTGCCGTCTCTTGCAAGAAACCCGTGA 768 0.4388 METEEKKLSFVRNGELRLPPGFRFHPTDEELVVQYLKRKVLSYPLPASIIPEVHVCKSDPWDLPGDMEQERYFFSTREAKYSNGSRSNRATHSGYWKATGLDKQILTSKGNQVVGMKKTLVFYRGKPPHGSRTDWIMHEYRLHNIQSSEAGMQNWVLCRIFLKRRSTNGKSEEQSSFRVRRDIIDGHYKSRPVFYDFLAQGKNNNKNICNTDLNRTPSTSTSSISGITHLSSHESDERGEESSSCNSLPSLARNP 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1757 255 MobiDBLite consensus disorder prediction 207 230 - -
Acco04g1757 255 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 17 222 - -
Acco04g1757 255 Gene3D NAC domain 27 168 IPR036093 GO:0003677|GO:0006355
Acco04g1757 255 ProSiteProfiles NAC domain profile. 18 163 IPR003441 GO:0003677|GO:0006355
Acco04g1757 255 MobiDBLite consensus disorder prediction 207 255 - -
Acco04g1757 255 Pfam No apical meristem (NAM) protein 19 142 IPR003441 GO:0003677|GO:0006355
Acco04g1757 255 SUPERFAMILY NAC domain 12 163 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1757 Acco-ChrAcco04 25167198 25168439 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1757 8 248 NAC Transcription Factor Family AT5G13180 58.915 7.19e-99 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco04g1757 NAM 2.1e-36 No_clan