Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1749 ATGGTTAGCCCCAAATCGCAGAGCCCTGAAAGCGTTCCTTGCGATTTCTGTACAGAACAAACAGCAATTCTGTACTGCCGAGCTGACTCGGCCAAGCTCTGTTTATTCTGCGATCAACACGTTCATTCTGCTAACTTGCTCTCTCGCAAGCACTTGCGCTCTCAGATCTGCGATAATTGCACCTCCGAGCCCGTCGCCGTCCGATGTAACACCGACAACCTTGTTCTCTGCCAAGACTGCGATTGGGACGCTCATGCCTTCTCCTCCGTCGCCGCCTCTCACCACCGCACCCCTGTTGAGGGTTTCTCTGGGTGTCCCTCCGCATCTGAACTCGCCTCGCTTTGGGGGTTTCATTTTGAGAGTAAGACTTCAGATCAATCTCCTTCTTCTTGTTTGATTCCGAACTGGGGTGAATATCGGGATTTGTATGCGCCACTTGAGTCCTGCCTGTTTAAATCCGATGGCGTTCCTCTTCAAGTTCATGACCTTATGGTTCCAAGGGAAACCGGTATGCTTTGCCTGTCCCCGGATTTTCAGGCCGCAGCCGCGGCCTGTAATGCTACAAAGAAACAGACTATTTGCTGTGGGAAGCAGAAACAGGTTATACACAAGCAGTTGGTTGAATTGCTCAAGAGGGATTCTGTGGTTGTTGATGTTGTTGGTGGTGGTGCTGAAGTTGACGGTGGCCTCAGCGGAGCAGGGCCAGGGGCTGCTAATGATGCTGAGAATTTGGTTCCTGAAGCACATAGAAAGAGCCCCGGATATGGCCGGCAAGCATTTGTTATGGGAAATGAGGTTCAAGGATTTCCGGCGATTACTGCTTCTCAGCCACAACCATTGCAGCAACAAGCTCCAGCTAATTCTCCGTTTATGATGCCTTCCGAGTTGCATCATAATGAAGGCGATAGATTGCGCCATAATAATTGCGGCAAGCACTCTGTCCAGATATGGGATTTCAATTCTGGACGACTAAGGGATCAGGAAGAATCAAGTGCACTTGAAGCAGCCTATGTAGCAAGTGATGGTGGATTTTTAGCCAAGAATTATAGTGAACTTATCAGAGAATCATCCATGACCGACACAAAATTGTTGCAAGATATGTACGACATGAATATAGCATATGATGATATGGCGGCATCATATAACGACCTGTCAAATAACCCGACAACAACATCAGAGAGCAACAACCCAACAAGAAGAAAGCAATCTAGGAATGATGCAGCTGCTGCTCCTGGGAAGCAGAAAGGTAATTATAGTGTGAAGGAGACACAGATTGGGGAATTTCCTTTGCTTGTCACAGGTGACAACAATATGGGAAAAGCAGGACGAAGCAAGGCTGACATGGACCTGTTGGCCCAAAACAGGGGCACCGCAATGCTCCGTTACAAAGAGAAAAAGAAAACTCGAAGGTACGAGAAGCACATAAGATATGAGTCTAGGAAGATGAGAGCTGACACCCGGAAACGAGTCAAAGGTCGATTTGTAAAGGCTAGTGACGTGGACGAAACTCCTCATGGTTAA 1521 0.4799 MVSPKSQSPESVPCDFCTEQTAILYCRADSAKLCLFCDQHVHSANLLSRKHLRSQICDNCTSEPVAVRCNTDNLVLCQDCDWDAHAFSSVAASHHRTPVEGFSGCPSASELASLWGFHFESKTSDQSPSSCLIPNWGEYRDLYAPLESCLFKSDGVPLQVHDLMVPRETGMLCLSPDFQAAAAACNATKKQTICCGKQKQVIHKQLVELLKRDSVVVDVVGGGAEVDGGLSGAGPGAANDAENLVPEAHRKSPGYGRQAFVMGNEVQGFPAITASQPQPLQQQAPANSPFMMPSELHHNEGDRLRHNNCGKHSVQIWDFNSGRLRDQEESSALEAAYVASDGGFLAKNYSELIRESSMTDTKLLQDMYDMNIAYDDMAASYNDLSNNPTTTSESNNPTRRKQSRNDAAAAPGKQKGNYSVKETQIGEFPLLVTGDNNMGKAGRSKADMDLLAQNRGTAMLRYKEKKKTRRYEKHIRYESRKMRADTRKRVKGRFVKASDVDETPHG 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1749 506 MobiDBLite consensus disorder prediction 383 419 - -
Acco04g1749 506 MobiDBLite consensus disorder prediction 383 403 - -
Acco04g1749 506 SMART bboxneu5 57 99 IPR000315 GO:0008270
Acco04g1749 506 SMART bboxneu5 9 56 IPR000315 GO:0008270
Acco04g1749 506 CDD Bbox1_BBX-like 13 56 - -
Acco04g1749 506 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 13 498 - -
Acco04g1749 506 ProSiteProfiles CCT domain profile. 455 497 IPR010402 GO:0005515
Acco04g1749 506 ProSiteProfiles Zinc finger B-box type profile. 52 99 IPR000315 GO:0008270
Acco04g1749 506 ProSiteProfiles Zinc finger B-box type profile. 9 56 IPR000315 GO:0008270
Acco04g1749 506 Pfam CCT motif 455 497 IPR010402 GO:0005515
Acco04g1749 506 Pfam B-box zinc finger 55 97 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1749 Acco-ChrAcco04 24919534 24922564 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1749 8 499 C2C2-CO-like Transcription Factor Family AT1G28050 40.200 7.54e-95 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Acco04g1749 CCT 1.9e-15 CL0281