Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1731 ATGATCTTTGTCATCAACTATATGCTCTTCAACCTGGGATTAACAGCTTATTTGATTGGTAACATGACTGATCTGGTTGTCCATTTTACAAGTCGAACTAGAGAATTTAGGGATACCATACAAGCGGCAGTGAGCTTTGCACAGAGGAATCAATTGCCGGCTCGGCTGCAAGATCAGATGATAGCTCATTTGTCTTTGAAGTTCAGAACAGATTCAGAGGGGTTACAGCGGCAACAAGAGACACTTGATTCTCTTCCTAAAGCCATAAGATCAAGCATTTCTCACTATCTCTTCTATTCTCTAGTGGATAAGGCTTATCTATTTCGTGGGGTCTCTAATGACTTGCTTTTCCAACTGGTGTCAGAAATGAAAGCAAAGTATTTTCCTCCCAAAGAAAACATCATCTTGCATAATGAAGGTCCCACAGATTTCTACATTCTAGCCACTGGTGTTGTGGAGCTGACAGTTATGCAAAATGGGGTAGAGCAAGTGGTGGGAGAGGCAACCATTGGTGATGTGTGTGGTGAGATAGGGGTACTTTGTTACAGGCCACAACTCTTCACCGTGCGAACCAAGCACTTGAGCCAATTTCTCCGGCTGAATCGCACAACCTTCCTCAACATTGTGCAGGCCAACATTGGAGACAGCGGCATAATCTTTAACAATCTCCTTAAGAATGAAGTTCTTGATTTACGGTGTTCTAATTCTGTGTATCACTTTGTGCATTATCAACATGTTGCAGCATCTAAAGGAAGTGAGAAATGTGCCCTGCTTTTGTTGAAATACGAAGCTGATCCTAACGTAAGAGATTGTAAAGGAAATGTACCATTATGGGAAGCAATTCTAGGTGGTCACCAACCAGTGATGAAGTTTTTAGCAAACAATGGAGCTTCCTTAAAATTTGGAGAAGCTTGTCATTTTGCTTGCACTGCAGCAGAAAAGAACAACCTTAGCTTGCTCATGGACATGATCCAATATGGAGGAGACGTCATACTTGCTAGGACTGACAATGGAATGATGGCCCTCCACGTGGTGGCCCTAAGGCCAACCCTTGTTAGGCCATATGAAGAGATCCAAGCCATTTTTGCATCAAGGAAGCCCAATAAGAAAGCTCAAAATGATGTATCCATTCCTGAGGGACAACCGAGTACAAAGAGAAGGAACCTCGAGAGGTTCACTAGCGAGCCGGCCATGCCGGCGGCACCCCGAGATGGTAATGACTGGTCATGGGGTATGAGCCACTAG 1245 0.4402 MIFVINYMLFNLGLTAYLIGNMTDLVVHFTSRTREFRDTIQAAVSFAQRNQLPARLQDQMIAHLSLKFRTDSEGLQRQQETLDSLPKAIRSSISHYLFYSLVDKAYLFRGVSNDLLFQLVSEMKAKYFPPKENIILHNEGPTDFYILATGVVELTVMQNGVEQVVGEATIGDVCGEIGVLCYRPQLFTVRTKHLSQFLRLNRTTFLNIVQANIGDSGIIFNNLLKNEVLDLRCSNSVYHFVHYQHVAASKGSEKCALLLLKYEADPNVRDCKGNVPLWEAILGGHQPVMKFLANNGASLKFGEACHFACTAAEKNNLSLLMDMIQYGGDVILARTDNGMMALHVVALRPTLVRPYEEIQAIFASRKPNKKAQNDVSIPEGQPSTKRRNLERFTSEPAMPAAPRDGNDWSWGMSH 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1731 414 ProSiteProfiles cAMP/cGMP binding motif profile. 107 226 IPR000595 -
Acco04g1731 414 SUPERFAMILY Ankyrin repeat 238 348 IPR036770 -
Acco04g1731 414 PANTHER POTASSIUM CHANNEL AKT1 244 344 IPR045319 GO:0005249|GO:0006813
Acco04g1731 414 CDD CAP_ED 107 212 IPR000595 -
Acco04g1731 414 FunFam Potassium channel KAT2 95 228 - -
Acco04g1731 414 MobiDBLite consensus disorder prediction 369 383 - -
Acco04g1731 414 Pfam Cyclic nucleotide-binding domain 126 211 IPR000595 -
Acco04g1731 414 SMART cnmp_10 107 224 IPR000595 -
Acco04g1731 414 SMART ANK_2a 239 268 IPR002110 GO:0005515
Acco04g1731 414 SMART ANK_2a 303 332 IPR002110 GO:0005515
Acco04g1731 414 SMART ANK_2a 272 301 IPR002110 GO:0005515
Acco04g1731 414 Gene3D - 227 373 IPR036770 -
Acco04g1731 414 MobiDBLite consensus disorder prediction 369 414 - -
Acco04g1731 414 SUPERFAMILY cAMP-binding domain-like 31 223 IPR018490 -
Acco04g1731 414 Gene3D Jelly Rolls 77 226 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1731 Acco-ChrAcco04 24057077 24061171 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1731 1 404 Ion Channels AT2G26650 50.418 9.20e-149 438