Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1730 ATGATCAGCTGGCTTTTCATTCTCCTTCTTTCTGCGTGTGGACGCCGCTGGAGCTCTTCTCCTGGTCATTGGCGCAGCAGGAGTCACGGGGACACTAAGATCTTTGTTCTCTTGATCGATCTCTTCTTCGGTTGTACCCAATTGCAAACGTCAGAGGTTGTCCGAGATTGTTCTAGGGATACCATACAAGCGGCAGCGAGCTTTGCACAGAGGAATCAATTGCCGGTTCGGCTGCAAGATCAGATGATAGCACATTTGTGTTTGAAGTTCAGAACAGATTCAGAGGGGTTACAGCAGCAAGAGACACTTGATTCTCTTCCTAAAGCCATAAGATCAAGCATTTCTCACTATCCTTTCTATTCTATAGTGGATAAGGTTTATTTATTTCGTGGGATCTCTGATGACTTGCTTTTCCAACTGGATCTGATCGTTATAGAAAATGGGGTAGAGCAAGTGGTGGGAGGGTCAATCAGTGGTGATATATGTGGTGAGACAGGGGTACTCTGTTACAAGCCACAACTCTTCACCGTGCGAACCAAGCGGTTGAGCCAACTCCTCCGGCTGAATCGCACAACCTTCCTCAACATTGTGCGGGCCAACTTTGGAGACGACGCCATAATCGTCAACAATTTCCTTGGGTATTTGAGGGAACAAAGTGATTACCCAATTATGAAGGGAGTGTTGGTTGAGACAGAGAACTTGCTCGCTCGTGGAATGATGGACTTACCCCCAAGCCTCTGCTTTGCCGCTCTAAGAGATGACGACTTGATGTTACATCAGTTGTTGAAACGAGGCTGGGATCCTAACGAAACTAACAACCTCGGAAGAACTGCCCTCAATGAAGTTGATTTACGGTGTTCTAATTCTGTGTATCACTTTGTGCATTATCAGCATATTGCAGCATCTAAAGGAAGTGAGAACTGTGCCCTGCTTCTATTGGATTACGAAGCTGATCCTAACTCAGGTCACAATTGTGAACGGAATGTGCCATTATGGGAAGCTATTCTTGGTGATCACCAACCAGTGGAGAAGCTTTTGGTTGAAAATGGAGCTTCCTTAAAATTTGGAGATGTGGCTCATTTTGCTTGCACTGCAGCAGAACTGAACAACCTTAGCTTGCTCAAGGACATAGTCCGATATGGAGAAGACGTGACCCTTGCTTGGAACCCCAATGGAACCACAGCCCTCCACTTGGCAGTCTTCGAGGCCAACGTTGAGATTGTCAAGTTCCTGCTGGATCATGGCTCCGACATAGACAAACCAGATAAGGAAGGTTGGACCCCAAGAGGTCTTACAGACCAACCAGGTCATGAAGAGATCAAAGCCATTTTTGCATCCTCAGAGGGGCCCAATAATGAAGCTCAATCTCTTGCAGCAGCCATTCGTGAGAGACAGCCAGTAATGGAGGTGGAGGAGGGTCTTTGGCTGCTAGAGTTACCATTACTTGTCCGGAGAAAAAGTGACGTGGGAGGGAGGCTCGTGCTTTTGCCCAAGAGGCTAAAGGAGCTAACTGATAATGTGACGGTTCTTAATAAAGATGGGACTCAGATTGATGATATTGATATTGTTAGAGATGGTGATCATCTTGTTTTTGTCTCTGTCGGCGATCTCATGCGTCAATCCGGTTGCCCAAAACCACCTTAA 1644 0.4653 MISWLFILLLSACGRRWSSSPGHWRSRSHGDTKIFVLLIDLFFGCTQLQTSEVVRDCSRDTIQAAASFAQRNQLPVRLQDQMIAHLCLKFRTDSEGLQQQETLDSLPKAIRSSISHYPFYSIVDKVYLFRGISDDLLFQLDLIVIENGVEQVVGGSISGDICGETGVLCYKPQLFTVRTKRLSQLLRLNRTTFLNIVRANFGDDAIIVNNFLGYLREQSDYPIMKGVLVETENLLARGMMDLPPSLCFAALRDDDLMLHQLLKRGWDPNETNNLGRTALNEVDLRCSNSVYHFVHYQHIAASKGSENCALLLLDYEADPNSGHNCERNVPLWEAILGDHQPVEKLLVENGASLKFGDVAHFACTAAELNNLSLLKDIVRYGEDVTLAWNPNGTTALHLAVFEANVEIVKFLLDHGSDIDKPDKEGWTPRGLTDQPGHEEIKAIFASSEGPNNEAQSLAAAIRERQPVMEVEEGLWLLELPLLVRRKSDVGGRLVLLPKRLKELTDNVTVLNKDGTQIDDIDIVRDGDHLVFVSVGDLMRQSGCPKPP 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1730 547 ProSiteProfiles cAMP/cGMP binding motif profile. 139 197 IPR000595 -
Acco04g1730 547 CDD CAP_ED 103 200 IPR000595 -
Acco04g1730 547 SUPERFAMILY Ankyrin repeat 245 445 IPR036770 -
Acco04g1730 547 SUPERFAMILY cAMP-binding domain-like 59 213 IPR018490 -
Acco04g1730 547 ProSiteProfiles Ankyrin repeat profile. 391 423 IPR002110 GO:0005515
Acco04g1730 547 SMART ANK_2a 391 420 IPR002110 GO:0005515
Acco04g1730 547 SMART ANK_2a 241 270 IPR002110 GO:0005515
Acco04g1730 547 SMART ANK_2a 326 355 IPR002110 GO:0005515
Acco04g1730 547 SMART ANK_2a 292 321 IPR002110 GO:0005515
Acco04g1730 547 Pfam Ankyrin repeats (3 copies) 365 428 IPR002110 GO:0005515
Acco04g1730 547 ProSiteProfiles Ankyrin repeat region circular profile. 391 423 - -
Acco04g1730 547 PANTHER POTASSIUM CHANNEL AKT1 143 532 IPR045319 GO:0005249|GO:0006813
Acco04g1730 547 Gene3D - 243 445 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1730 Acco-ChrAcco04 23974722 23979470 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1730 59 533 Ion Channels AT2G26650 48.258 3.92e-164 483