Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1726 ATGGCCTTAGAGCAGCAGTTATCACTGGGTCCGAATCCCAATCCCGTTGACGGCCAAACTGACGGAACTAATAACGGCGTTGATTTCCGGCAGGCGTCCACCGACGCCGGAGAGGATGGCGTCAAGGCGCCGAGGCTGCCTCGCTGGACGAGACAGGAGATTCTGGTGCTGATACATGGCAAGAGGGATGCGGAGAATCAAATTCGAGGGAGTCGTAGTGCGGGTTTGCCATTTGGGACGGGTCAGCTTGAGCCGAAATGGGCTTCGGTATCATCGTACTGCAAAAAGCATGGAGTGAATAGAGGTCCGGTTCAGTGCCGGAAAAGGTGGAGCAATTTGGCTGGGGATTATAAGAAGATCAAGGAATGGGAATCTCAGGTAATGGACGATTCGGAATCGTTTTGGGTGATGAGAAACGATTCAAGGAGAGAGAAGAAATTGCCGGGATTTTTCGATAAGGAGGTCTATGACATTCTCGATTCCGGATCGCAGGCGCCGGCGTTATCTTTAGCTCTGGCATCGCCTCCCGCAACTGCAACTGTTCCGGTGGAAAAGAGGAAAGACAGTGGGGGAGTGGCGGCAGAGGCAGTGGAGGCTGATACCGAGCAACACTTGTATGATAGTCGGAGCGCTGCCGGAGAGGATGGCTTGTTCTCGGATTTCGAACAGGAAGAGGCAGGATTGAGTCCAGAAAAGGAAGCAGTGAGGAAAGATGCTTCAACACATTCGACGCCTGTTATCCCAATCTCAGAGAAGCAATATCAACCACTTCTGCGTGGCTGTAAAGGTGAAGGAAATGCTCAAGGTGGGAGCAATGAGAAACGTCGAGGCCCGAATCCAGAAACAGGTTCTACATCTCAAGGAGGTCGGAAGAGGAAGCGGTTTCCAACAACGGATGAGGAGGATGAAATTCTGCAAAATCAATTGATCGATGTGTTGGAAAGAAATGGGAAGATGCTGAGCTCCCAGCTCGAAGCCCAGAACCTAAATTTCCACTTGGACAGGGAGCAGCGGAAAGACCATGCTAGTCACTTAGTTGCTGTTCTTGATAAGCTTGCAGATGCTTTAGGCAGAATTGCTGATAAATTATAG 1092 0.5073 MALEQQLSLGPNPNPVDGQTDGTNNGVDFRQASTDAGEDGVKAPRLPRWTRQEILVLIHGKRDAENQIRGSRSAGLPFGTGQLEPKWASVSSYCKKHGVNRGPVQCRKRWSNLAGDYKKIKEWESQVMDDSESFWVMRNDSRREKKLPGFFDKEVYDILDSGSQAPALSLALASPPATATVPVEKRKDSGGVAAEAVEADTEQHLYDSRSAAGEDGLFSDFEQEEAGLSPEKEAVRKDASTHSTPVIPISEKQYQPLLRGCKGEGNAQGGSNEKRRGPNPETGSTSQGGRKRKRFPTTDEEDEILQNQLIDVLERNGKMLSSQLEAQNLNFHLDREQRKDHASHLVAVLDKLADALGRIADKL 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1726 363 ProSiteProfiles Myb-like domain profile. 48 114 IPR001005 -
Acco04g1726 363 MobiDBLite consensus disorder prediction 1 31 - -
Acco04g1726 363 MobiDBLite consensus disorder prediction 181 205 - -
Acco04g1726 363 MobiDBLite consensus disorder prediction 272 291 - -
Acco04g1726 363 MobiDBLite consensus disorder prediction 1 45 - -
Acco04g1726 363 Pfam Myb/SANT-like DNA-binding domain 48 135 IPR044822 -
Acco04g1726 363 Gene3D - 49 119 - -
Acco04g1726 363 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 20 363 - -
Acco04g1726 363 MobiDBLite consensus disorder prediction 225 239 - -
Acco04g1726 363 MobiDBLite consensus disorder prediction 223 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1726 Acco-ChrAcco04 23835888 23838756 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1726 48 122 Trihelix Transcription Factor Family AT1G33240 32.000 2.38e-06 47.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Acco04g1726 Myb_DNA-bind_4 1.8e-11 CL0123