Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Acco04g1723 | ATGCAATTCGCAAAGCTCGATGACTCTCCTATGTTTCGCAAGCAGATGCAATGCCTGGAGGAAGGTTCAGAATCTTTGAGAGAGAGAAGTTTGAAATTTTACAAAGGGTGCAGAAAATACACTGAAGGACTGGGGGAGGCATACGATGGTGACATCGCATTTGCAAGTGCTTTGGAAAGTTTTGGTGGAGGCCATAATGATCCCATCAGTGTTGCTTTTGGAGGCCCTGTTATGACCAAATTCACTATAGCCTTGAGAGAAATTGGGACATACAAAGAAGTCCTTCGGTCACAGGTTGAACATATGCTAAATGACAGATTACTCCAATTTGTGAATATTGACTTGCATGAAGTCAAGAGCATTGCTCCTAAAGAATTAACCTCCTTGAGAGCCATACTCTATGGAAATCACTTCAGCCACTGGGTTGCACCCTCTATGGTTTCTGATATATGGGAACCACCTTTTGTGCAGGAAGCACGCAAGCGTTTTGACAAAGCCAGTCTTATTTATGATCAGGCTCGTGAAAAGTTCCTCTCTTTAAGAAAAGGCACAAAAACAGATGTAGCTACTGCTCTTGAAGAGGAACTTCATAATGCAAGATCCACTTTTGAGCAAGCTCGATTTAATCTGGTTACTGCTTTGTCAACTGTTGAAGCCAAGAAGAGATTTGAATTCTTGGAAGCAGTCAGTGGGACCATGGATGCACATCTTCGCTACTTCAAACAGGGTTATGAGTTATTGCATCAAATGGAGCCGTATATTAACCAGGTCTTGACATATGCTCAGCAGTCAAGAGAAAGATCCAACTATGAGCAGGCAGCTCTAAATGAAAGAATGCAAGAGTACAAAAGGCAGATCGACCGAGAGAGTAGGTGGTCTTCAAATGGTTCTAATGGGTCTCCTAATGGAGATGGTATACAAGCCATCGGCAGAAGTTCACATAAAATGATAGAGGCAGTTATGCAATCTGCTGCCAAGGGAAAGGTTCAAACAATTCGACAAGGTTATCTTTCAAAGCGGTCTTCAAACTTAAGGGGTGACTGGAAAAGGAGGTTTTTTGTTCTTGACAGTCGAGGAATGTTGTATTACTATCGTAAGCAGTGCAGCAAATCTGGGTCTAGCAGTCAACATTCTGCTCAGAGGAATAGTTCTGAGCTTGGTTCTGGCCTCTTGAGCCGATGGCTATCTTCTCATCATCATCACGGTGGGGTACATGATGAAAAATCTGTTGCCCATCACACAGTGAACCTGCTTACATCAACAATCAAAGTTGATGCAGACCAATCAGACTTGAGGTTTTGCTTCAGAATCATTTCACCAACAAAGAACTACACTTTGCAGGCAGAGAGTGCACTGGACCAAATGGATTGGATTGAAAAGATCACAGGTGTTATTGCTTCATTGCTGAGTTCACAGATTCCTGAAAGGTGTCTCCCTGCTAGTCCAATGGGAAGTGGTCATAATAGGTCTGCCAGTGAGAGTAGTTCTTTTGAAAGTTCAGATTTTGATCACTCTGCTGTAGAAGAATATAAATCGGACAGAGGTCTTGCTTCTGCACATATGGATCGCCACTCAAGAAGCTTGCAACTGCAGCAACGAGTATGTATCAAAAGTGAGAAACCAATTGATGTTTTGCGAAGAGTTCATGGAAATGAGATATGTGCTGATTGTGGGGCGCCTGAACCTGATTGGGCATCATTAAATCTCGGTGTTCTTGTTTGCATTGAGTGTTCTGGTGTTCACCGGAATCTTGGTGTACACATATCAAAGGTTAGGTCTCTTACATTGGATGTTAAAGTGTGGGAACCTTCTGTGATAAGTTTGTTTCAATCACTTGGGAATACTTTTGCCAACTCAGTCTGGGAGAAAATGTTGCAATCAAGAAGTGCCTTTCAGATTGATCTTGTCCCCACAGGCTTAAGCAAGTCCGACAAACCACAGGTTCTCTTCATCAGCAAACCTTGTCAATCTGATTCTTTATCTGTGAAGGAAAAGTTCATCCATGCAAAGTATGCAGAGAAGCTTTTTGTTCACAAGCCAAATGACAATCAATATCGTCTCTTTCTGGCGCAACAGATCTGGGAGGCTGTTCGTTCTAATGACAAAAAAGCGGTGTACCACCACATTGTTAATTATGAAGCTGACGTTAATGCTGTTTATGAGCAAACATGCAGCTCTTCTTTAACCCTTGCCAAAGTGATGCTATTACAAGAGCAGACAGGCCATGATCACGAATCTTCTTTAGCAGGGAACTCATTCGACTGGTCCTCTACTCTTTTGAATATGATTGGAGCAAAAGAAGATCCAACCGTGAATGATCTTGATGGGTGCACCTTACTTCACCTTGCTTGTGAAACTGCAGATATTGGCATGCTGGAGCTCCTTCTTCAGTATGGTGCAATTATTAGTGCTACTGACATGAGAGGTCAAACACCTCTCCATCGCTGCATTCTCAAAGGAAAATCTACATTGGCAAGATTACTTCTCTCAAGGGGGGCTGATCCTCAAGCTGTGGATGAAGAGGGAAGAACCCCCCTTGATCTTGCTGTACAGTCAAATTTTGACGACAGTGAAGTGCTTGCTTTATTGTCTGATTCCAACGGATGA | 2607 | 0.4273 | MQFAKLDDSPMFRKQMQCLEEGSESLRERSLKFYKGCRKYTEGLGEAYDGDIAFASALESFGGGHNDPISVAFGGPVMTKFTIALREIGTYKEVLRSQVEHMLNDRLLQFVNIDLHEVKSIAPKELTSLRAILYGNHFSHWVAPSMVSDIWEPPFVQEARKRFDKASLIYDQAREKFLSLRKGTKTDVATALEEELHNARSTFEQARFNLVTALSTVEAKKRFEFLEAVSGTMDAHLRYFKQGYELLHQMEPYINQVLTYAQQSRERSNYEQAALNERMQEYKRQIDRESRWSSNGSNGSPNGDGIQAIGRSSHKMIEAVMQSAAKGKVQTIRQGYLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKSGSSSQHSAQRNSSELGSGLLSRWLSSHHHHGGVHDEKSVAHHTVNLLTSTIKVDADQSDLRFCFRIISPTKNYTLQAESALDQMDWIEKITGVIASLLSSQIPERCLPASPMGSGHNRSASESSSFESSDFDHSAVEEYKSDRGLASAHMDRHSRSLQLQQRVCIKSEKPIDVLRRVHGNEICADCGAPEPDWASLNLGVLVCIECSGVHRNLGVHISKVRSLTLDVKVWEPSVISLFQSLGNTFANSVWEKMLQSRSAFQIDLVPTGLSKSDKPQVLFISKPCQSDSLSVKEKFIHAKYAEKLFVHKPNDNQYRLFLAQQIWEAVRSNDKKAVYHHIVNYEADVNAVYEQTCSSSLTLAKVMLLQEQTGHDHESSLAGNSFDWSSTLLNMIGAKEDPTVNDLDGCTLLHLACETADIGMLELLLQYGAIISATDMRGQTPLHRCILKGKSTLARLLLSRGADPQAVDEEGRTPLDLAVQSNFDDSEVLALLSDSNG | 868 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Acco04g1723 | 868 | PRINTS | HIV Rev interacting protein signature | 593 | 614 | IPR001164 | GO:0005096 | |
Acco04g1723 | 868 | PRINTS | HIV Rev interacting protein signature | 551 | 570 | IPR001164 | GO:0005096 | |
Acco04g1723 | 868 | PRINTS | HIV Rev interacting protein signature | 570 | 587 | IPR001164 | GO:0005096 | |
Acco04g1723 | 868 | MobiDBLite | consensus disorder prediction | 479 | 500 | - | - | |
Acco04g1723 | 868 | Pfam | BAR domain of APPL family | 6 | 120 | IPR004148 | GO:0005515|GO:0005737 | |
Acco04g1723 | 868 | Pfam | BAR domain of APPL family | 156 | 270 | IPR004148 | GO:0005515|GO:0005737 | |
Acco04g1723 | 868 | CDD | PH_ACAP | 333 | 470 | - | - | |
Acco04g1723 | 868 | SMART | 5bar | 11 | 256 | IPR004148 | GO:0005515|GO:0005737 | |
Acco04g1723 | 868 | SMART | PH_update | 331 | 468 | IPR001849 | - | |
Acco04g1723 | 868 | MobiDBLite | consensus disorder prediction | 485 | 500 | - | - | |
Acco04g1723 | 868 | ProSiteProfiles | ARF GTPase-activating proteins domain profile. | 539 | 684 | IPR001164 | GO:0005096 | |
Acco04g1723 | 868 | Pfam | PH domain | 332 | 465 | IPR001849 | - | |
Acco04g1723 | 868 | CDD | ArfGap | 542 | 671 | - | - | |
Acco04g1723 | 868 | ProSiteProfiles | Ankyrin repeat profile. | 775 | 807 | IPR002110 | GO:0005515 | |
Acco04g1723 | 868 | ProSiteProfiles | Ankyrin repeat region circular profile. | 775 | 806 | - | - | |
Acco04g1723 | 868 | Gene3D | Arfaptin homology (AH) domain/BAR domain | 154 | 288 | IPR027267 | - | |
Acco04g1723 | 868 | Gene3D | Arfaptin homology (AH) domain/BAR domain | 4 | 130 | IPR027267 | - | |
Acco04g1723 | 868 | SUPERFAMILY | ArfGap/RecO-like zinc finger | 539 | 679 | IPR037278 | - | |
Acco04g1723 | 868 | SUPERFAMILY | PH domain-like | 272 | 465 | - | - | |
Acco04g1723 | 868 | ProSiteProfiles | Ankyrin repeat region circular profile. | 808 | 840 | - | - | |
Acco04g1723 | 868 | Gene3D | Arf GTPase activating protein | 519 | 682 | IPR038508 | - | |
Acco04g1723 | 868 | SUPERFAMILY | Ankyrin repeat | 693 | 856 | IPR036770 | - | |
Acco04g1723 | 868 | Coils | Coil | 189 | 209 | - | - | |
Acco04g1723 | 868 | Gene3D | - | 683 | 865 | IPR036770 | - | |
Acco04g1723 | 868 | ProSiteProfiles | Ankyrin repeat profile. | 808 | 840 | IPR002110 | GO:0005515 | |
Acco04g1723 | 868 | MobiDBLite | consensus disorder prediction | 285 | 308 | - | - | |
Acco04g1723 | 868 | SMART | arf_gap_3 | 539 | 684 | IPR001164 | GO:0005096 | |
Acco04g1723 | 868 | Pfam | Ankyrin repeats (3 copies) | 765 | 838 | IPR002110 | GO:0005515 | |
Acco04g1723 | 868 | Pfam | Putative GTPase activating protein for Arf | 542 | 679 | IPR001164 | GO:0005096 | |
Acco04g1723 | 868 | Coils | Coil | 156 | 176 | - | - | |
Acco04g1723 | 868 | CDD | BAR_SFC_plant | 14 | 253 | IPR035670 | - | |
Acco04g1723 | 868 | PANTHER | CENTAURIN/ARF | 3 | 866 | IPR045258 | GO:0005096 | |
Acco04g1723 | 868 | SUPERFAMILY | BAR/IMD domain-like | 9 | 256 | IPR027267 | - | |
Acco04g1723 | 868 | Coils | Coil | 265 | 285 | - | - | |
Acco04g1723 | 868 | Gene3D | - | 323 | 476 | IPR011993 | - | |
Acco04g1723 | 868 | SMART | ANK_2a | 775 | 804 | IPR002110 | GO:0005515 | |
Acco04g1723 | 868 | SMART | ANK_2a | 841 | 868 | IPR002110 | GO:0005515 | |
Acco04g1723 | 868 | SMART | ANK_2a | 808 | 837 | IPR002110 | GO:0005515 | |
Acco04g1723 | 868 | MobiDBLite | consensus disorder prediction | 291 | 307 | - | - | |
Acco04g1723 | 868 | FunFam | ADP-ribosylation factor GTPase-activating protein AGD1 | 520 | 685 | - | - | |
Acco04g1723 | 868 | ProSiteProfiles | PH domain profile. | 330 | 466 | IPR001849 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Acco04g1723 | Acco-ChrAcco04 | 23745631 | 23755710 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Acco04g1723 | 551 | 681 | C2H2 Transcription Factor Family | AT4G21160 | 42.424 | 5.19e-21 | 93.6 |