Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1722 ATGGAGGCCGAGCTCTTTCTCTCTCTCTAGTTTTGTGGCTAGCGGACCCCACATAGTACTGGACTACTGGCTACTCAGAAAGGCGGGAACCCAGTTTTGTCGCTGGGTTATGATTCATATTCTTGTTCAGATTCGTCGGAAGGAACAAATGATTTTGCAACTAAGATAAGTTATGGGATTCGGTTGGAAAACGAATATGATTCCTTGCAGCTTCCTTGTGACGATACTGAGCTGAAAAACGATACGCTTTTTAACAGATCCGATTCTCTTAAAATCCCTCCTATGAGACGCATTTCCTGGCATATTGCTCCAAAATTTGAGCCAGTTAGAGCTGCTTCTTCTAAAGATTTTGTGGCTCTACAATTTGCTCTAATGGTTTCCAAAAGATACAGTTCCTCATATTACACAAAGGAGTTCTTAACTTTACTCTTGCTGTGCTTATTTAGCTTCCAGAACAGTACTGTTGAGTGCCAGGGAAGGTTGTATAAACATAACTATTCAGAATCAGAAACTGAGTATCCATCAAGGCCTTCACAAGACAAGGAAGATTTGCGCAAGATTATCGTAAGTGTTGTTCTGGGATCAGTCACTGGATTAGTTGGCTCCGTTTTGTTTGCTCTTATAGTTCGTTGCTTTGTTCAGTATCTCAATCAAACCCCAATACTGAAGGGGCCTGTCATATTTTCCCCCAAAATTTCTCCCAAGACACTCCAATCAGCTTTGGCAAAAGAAAACCATTTACTTGGTTCAAGCCTAAATGGTAGATGTTACAGAACAGTGCTTGACAATGGGCTCACGATTGCAGTGAAGAGGCTTACACCCTTTGAACCCGGTTCGCTGGAGATTAGGAAAAAGAGGGTTAAGAGAGAAATACAGAAGGAGCTGGAAGTGCTTGCTAGTCTAAGGCATCGGAATTTGATGAGCTTAAGGGCGTATGTTCGTGAACCTGATAGTTTTTCCTTGGTTTATGATTATGTAGCGAAGGGCAGCCTTGCTGATGCAATGAATAGAGCTAAGGAAACGGAGTTGCCGCCGCTTGGTTGGGAAATTAGGCTGAGGATTGCTATTGGGGTTGCTAAGGGGCTTCGGTATCTTCATTCTACTTGTGTGCCTCAGATTCTGCACTACAACCTTAAGCCCTCCAATGTGATGTTGGATGCCGAGTATGAACCTAGGTTGTCTGATTATGGATTGGTTAAGCTTCTACCCAACTTGAATAGAGCCACATCTCCCTACACTCCTCCTGAATGCTTACATAATTGCAGCAGGTACAGTGAGAAAAGTGATATATTCAGTTTTGGGATGATCTTGGGTGTATTATTAACTGGAAGGGACCCCAGAGATGCATTCTTTGAAGAAGCAGGTAATGGGGGGAGCATGGGGTGTTGGCTAAGGCAGTTGCAGGAAGCAGGAGACGCCAAGGAAGCGCTCGACAAGAGCCTCCTTGACGCGAGGGAAGGGGACGAAGACGATATGCTCATGGCTGTCAGGGTGGCCGCGGCGTGCCTCTCCGATGTGCCTGCAGATAGGCCTTCCAGTGATGAACTTGTTCACATGCTAACGCAACTTCACAGTTTTTGA 1581 0.4478 MEAELFLSLXFCGXRTPHSTGLLATQKGGNPVLSLGYDSYSCSDSSEGTNDFATKISYGIRLENEYDSLQLPCDDTELKNDTLFNRSDSLKIPPMRRISWHIAPKFEPVRAASSKDFVALQFALMVSKRYSSSYYTKEFLTLLLLCLFSFQNSTVECQGRLYKHNYSESETEYPSRPSQDKEDLRKIIVSVVLGSVTGLVGSVLFALIVRCFVQYLNQTPILKGPVIFSPKISPKTLQSALAKENHLLGSSLNGRCYRTVLDNGLTIAVKRLTPFEPGSLEIRKKRVKREIQKELEVLASLRHRNLMSLRAYVREPDSFSLVYDYVAKGSLADAMNRAKETELPPLGWEIRLRIAIGVAKGLRYLHSTCVPQILHYNLKPSNVMLDAEYEPRLSDYGLVKLLPNLNRATSPYTPPECLHNCSRYSEKSDIFSFGMILGVLLTGRDPRDAFFEEAGNGGSMGCWLRQLQEAGDAKEALDKSLLDAREGDEDDMLMAVRVAAACLSDVPADRPSSDELVHMLTQLHSF 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1722 526 CDD STKc_IRAK 248 523 - -
Acco04g1722 526 Gene3D Transferase(Phosphotransferase) domain 1 326 525 - -
Acco04g1722 526 Pfam Protein kinase domain 244 518 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g1722 526 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 138 522 - -
Acco04g1722 526 Coils Coil 284 304 - -
Acco04g1722 526 ProSiteProfiles Protein kinase domain profile. 242 526 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g1722 526 SUPERFAMILY Protein kinase-like (PK-like) 245 520 IPR011009 -
Acco04g1722 526 FunFam Inactive leucine-rich repeat receptor-like protein kinase CORYNE 234 325 - -
Acco04g1722 526 Gene3D Phosphorylase Kinase; domain 1 222 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1722 Acco-ChrAcco04 23739417 23745323 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1722 188 523 Receptor kinase-like Gene Family AT2G31880 34.174 2.83e-55 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Acco04g1722 Pkinase 1.7e-32 CL0016