LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco04g1704	ATGGAGGACAGAGTAGTGAACACAATCGCTGTAATATCAGTGATTGTTCTGACCACTATCGTCGTCATAGCTCACCTCTTCTTAAAGCGTTCAAAAGCCTTCTTCTTAATCCTCGGGGCCGATGTCGCCGTGATCTTCGCGGTATTCGCCTGCGTTCTAATCCGATTCCGATACAACCGCAGAAGAAGACTTATAGAATCCCAATACAAATCTGAAGGTAGAGAGCTCCGAATAGAGTACAGCTTCTTGCGAAAAGTCGCCGGACTTCCGATTAAGTTCCGATTCCAAGAGCTCGAACACGCCACCGACAGATTCCAGTCTCTACTCGGCGAAGGAGCCTCTGCTTCAGTCTTCAAAGGTATTTTAAACGACGGCACGTTGGTCGCAGTCAAGAGAATCAACGGCGATCAAAGAGCCGAGAAGGAGTTCAAATCGGAAGTCGCCGCCATAGCCAGCGTCCAACACGTCAACCTTGTGCGACTGATCGGGTACTGCAACTCCGGGAAGGACCCCAGATACTTGGTTTATGAGTACATCCCAAATGGATCTTTAGATTCCTGGATATTCCCCGCTAAAACCACCGAAAATCGCCGAAGATCTCGCCGCGGGTTCTTATCGTGGAGCCTGAGATACAGAGTCGCCATTGATGTAGCCAAAGCCCTGTCTTACCTCCACCATGATTGCCGATCAAGGATCCTCCACCTCGACGTAAAACCAGAGAACATTCTATTAGACGAGAATTTCAAAGCCGTCGTCTCCGACTTCGGCCTGTCAAAGCTGATGGGGAAAGACGAGAGCGAAGTGATGACCACAGTGAGAGGAACAAGAGGATATCTAGCACCAGAATGGCTCTTAGAACACGGAGTTTCAGAGAAAACAGATATCTACAGTTACGGAATGGTACTGTTAGAGATAATCGGAGGAAGAAGAAATGTGAGATGGGTCCAAGATCCGAAGGACAAGGCGAATAAGAAATCGGAGTACTTTCCGAAGATCGTGAACGAGAAGGTCAGGGAAGGGAAAGTAGTGGACATATTGGATCAGAGGTTGGTTGAAGATGGTGGTGGAGGAGTGGAAGAGAGAGAAGTGAAGAGGTTGGTTTATGTGGCACTTTGGTGCATTCAAGAGAGGCCAAGAGTGAGGCCAAATATGAAACATGTGGTTGAGATGCTTGAAGGGAGAGAGAAAGTGGAGGAGCCACCTGATACGAGGATGGTTATGGCTAATTTTCTTTCAATGGAAGGAGAAGATGAAGGAGGAGGAGGAGGAGGATGCAACAGTGGTAATGCCACAAGATTGGCTGATTATTTGGCGACTCAGAGGGCAACAATAGGGAGGAATTTGGAATATGGATCCACTTATTCTATGGCCACCACTGTTCTGTCTGGCAGATAG	1395	0.4796	MEDRVVNTIAVISVIVLTTIVVIAHLFLKRSKAFFLILGADVAVIFAVFACVLIRFRYNRRRRLIESQYKSEGRELRIEYSFLRKVAGLPIKFRFQELEHATDRFQSLLGEGASASVFKGILNDGTLVAVKRINGDQRAEKEFKSEVAAIASVQHVNLVRLIGYCNSGKDPRYLVYEYIPNGSLDSWIFPAKTTENRRRSRRGFLSWSLRYRVAIDVAKALSYLHHDCRSRILHLDVKPENILLDENFKAVVSDFGLSKLMGKDESEVMTTVRGTRGYLAPEWLLEHGVSEKTDIYSYGMVLLEIIGGRRNVRWVQDPKDKANKKSEYFPKIVNEKVREGKVVDILDQRLVEDGGGGVEEREVKRLVYVALWCIQERPRVRPNMKHVVEMLEGREKVEEPPDTRMVMANFLSMEGEDEGGGGGGCNSGNATRLADYLATQRATIGRNLEYGSTYSMATTVLSGR	464

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco04g1704	464	ProSitePatterns	Protein kinases ATP-binding region signature.	109	131	IPR017441	GO:0005524
	Acco04g1704	464	PANTHER	OS07G0415500 PROTEIN	34	403	-	-
	Acco04g1704	464	Pfam	Protein kinase domain	107	389	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Acco04g1704	464	SMART	serkin_6	103	391	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Acco04g1704	464	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	232	244	IPR008271	GO:0004672\|GO:0006468
	Acco04g1704	464	ProSiteProfiles	Protein kinase domain profile.	103	397	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Acco04g1704	464	Gene3D	Transferase(Phosphotransferase) domain 1	179	410	-	-
	Acco04g1704	464	CDD	STKc_IRAK	109	393	-	-
	Acco04g1704	464	Gene3D	Phosphorylase Kinase; domain 1	67	178	-	-
	Acco04g1704	464	FunFam	Putative receptor-like protein kinase	179	399	-	-
	Acco04g1704	464	FunFam	Putative receptor-like protein kinase	70	178	-	-
	Acco04g1704	464	SUPERFAMILY	Protein kinase-like (PK-like)	86	392	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco04g1704	Acco-ChrAcco04	23279235	23280629	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco04g1704	1	403	Receptor kinase-like Gene Family	AT5G20050	62.469	2.79e-171	487

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_SD-2b	Acco04g1704		Pkinase	2.9e-45	CL0016