Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1700 ATGGAGAGAGAAATGTTCGGAAGAAGAAACAGAGGGGTGTTACCAGGGGTGTGTCGGGAACAAGAGCTTGAATTGTGCACAGATGGCGGTCACTACAGTCTCTCTACCGGTATATTACCTGCTCTCGGTGGTCGGAGTAACCGCCAAAGCTTCATTCGTCCGTTCATTATCTCCCCCTACGACCGACGTTACAGGATATGGCAGACTTTTCTGGTGATTCTGGTCTTATACACCGCATGGGTATCCCCATTTGAGGTCGGATTCCTTAAGCAACCTGTGACACCACCACTCTCCATTGTAGACAATGTTGTCAATGGATTCTTCGCAATCGACATAATTCTCACCTTCTTCATTGCTTATCTTGACAAAGCCTCCTACTTATTAGTGGATAGCCACAGAAGAATCGCCTGGAAGTACACACGTTCTTGGTTAGTCCTTGATGTTATCTCTACCATCCCTTCAGAACTCGCTCACCAAATCTCCCCTTCCCCTCTTAAATCCTATGGATTCTTCAACCTGCTTCGTCTTTGGCGTCTCCGAAGAGTCAGTGCTCTGTTTTCTAGGTACGAAATACGATTGGAGAAAGACAAGAGCTATAAGTATTTCTGGGTTCGTTGTGTTAAGCTTATATATGTTACGCTAATTGCGGTTCACTTTGCTGGATGCTTCTATTATCTTCTTGCTGCTCGGCATCATGATCCCAAAAAGACATGGTTGGGAGTACAAATGGGGGCGGATTTTAAGGAACAAAGCTTGTGGTCTAGATATGTGATTTCTATATACTGGTCTATTACAACCTTAACAACTGTGGGCTATGGAGATTTGCATCCAGTCAATTCCTGGGAGATGACCTGTGACATCCTCTATATGTTCTTTAACCTGGGATTAACGGCTTATTTGATTGGTAACATGACCAGTATGGTTGTCCATTTCACAAGTCGAACCAGAGAATTTAGGGATACCATACAAGCGGCAGCGAGCTTTGCTCAGAGGAATCAATTGCCGGTTCGGCTGCAAGATCAGATGATAGCACATTTGTGTTTGAAGTTCAGAACAGATTCAGAGGGATTACAACAGCAAGAGACACTTGATTCTCTTCCTAAAGCCATAAGATCAAGCATTTCTCACTACCTCTTCTATTCTGTGGTGGATAAGGTTTATTTATTTCGTGGAGTCTCTAATGACTTGCTTTTCCAACTGGTGTCGGAAATGAAAGCAGAGTATTTTCCTCCTAAAGAAGACATCATCTTGCAAAATGAAGCTCCTACAGATTTCTACATTCTAGCCACAGAGCAAGTGGTGGGAGAGGCAACCAGTGGTGATCTGTGTGGTGAGATAGGTGTACTTTGTTACAGGCCACAACTCTTCACCGTGCGAACTAAGCAATTGAGCCAACTTCTCCGGCTGAATCGCACAACCTTCCTTAACATTGTGCAGGCCAACATTGGAGATGGCACCATAATCGTCAACAATCTCCTTGAGCATTTGAAGGAACAAAGTGGCCCAATTATGAAGGGAGTGTTGGTTGAGACAGAAAACATGCTTGCTCGTGGAAGGATGGACTTACCGCTTAGCCTTTGCTTCGCCGTTCTAAGAGACGACGACCTGATGTTACATCAGTTGTTGAAACGAGGCTTGGATCCTAACGAATCTGACAACACTGGAAGAACTGCCCTTCATGTTGCAGCATCTAAAGGAAGTGAGAACTGTGTCCAGCTACTATTGGATTACGAAGCTGATCCTAACGTAAGAGATTGTGAAGGGAATGTACCATTATGGGAAGCAATTTTGGGTGGTCAGCAACCCGTGGTGAAGCTTTTAGTAGAAAATGGAGCTTCCTTAAAATTTGGAGAAGTGGGTCATTTTGCTTGCACTGCAGCAGAACAGAACAACCTTAGCTTGTTCAAGGACATAGTCCAATATGGAGGAGGCGTCACACATGCTTGGACCTACAATGGAACCACGGCCCTCCACGTGGCGGTTTCCGAGGCCAACGTGGAGATCATCAAATTCCTGCTACATCATGGCTCCGACATAGACAAACCAGATAAGGAAGGCTGGACGCCAAGAGGTCTTGCGGATCAACAAGGCCATGAAGAGATCAAAGCCATTTTTGCATCTTTAGGGGAGCCTAATAATAAAGCTCAACATGTTGCAGCCATTCCTGAGTGGCAACCGAAGAAAGGCGATGTGGGAGGGAGGCTTGTGCTTTTGCCTAAGAGCCTAAAGGAGCTGATTGAGATTGGAGTTAAGAAATTTGGACTGGTTCATGATAATGTCAAGGTTCAGAACAAAGAAGGGGCTCAAATTGATGATATTGAAGTTGTTAGAGATGGTGATTATCTTGTTTTTGTCTCTGTTGGTGGTCTCATGCGTCAGTCCGGTTGCCCAGAAGCACATGAAAAGGGCATGGTTTAA 2418 0.4487 MEREMFGRRNRGVLPGVCREQELELCTDGGHYSLSTGILPALGGRSNRQSFIRPFIISPYDRRYRIWQTFLVILVLYTAWVSPFEVGFLKQPVTPPLSIVDNVVNGFFAIDIILTFFIAYLDKASYLLVDSHRRIAWKYTRSWLVLDVISTIPSELAHQISPSPLKSYGFFNLLRLWRLRRVSALFSRYEIRLEKDKSYKYFWVRCVKLIYVTLIAVHFAGCFYYLLAARHHDPKKTWLGVQMGADFKEQSLWSRYVISIYWSITTLTTVGYGDLHPVNSWEMTCDILYMFFNLGLTAYLIGNMTSMVVHFTSRTREFRDTIQAAASFAQRNQLPVRLQDQMIAHLCLKFRTDSEGLQQQETLDSLPKAIRSSISHYLFYSVVDKVYLFRGVSNDLLFQLVSEMKAEYFPPKEDIILQNEAPTDFYILATEQVVGEATSGDLCGEIGVLCYRPQLFTVRTKQLSQLLRLNRTTFLNIVQANIGDGTIIVNNLLEHLKEQSGPIMKGVLVETENMLARGRMDLPLSLCFAVLRDDDLMLHQLLKRGLDPNESDNTGRTALHVAASKGSENCVQLLLDYEADPNVRDCEGNVPLWEAILGGQQPVVKLLVENGASLKFGEVGHFACTAAEQNNLSLFKDIVQYGGGVTHAWTYNGTTALHVAVSEANVEIIKFLLHHGSDIDKPDKEGWTPRGLADQQGHEEIKAIFASLGEPNNKAQHVAAIPEWQPKKGDVGGRLVLLPKSLKELIEIGVKKFGLVHDNVKVQNKEGAQIDDIEVVRDGDYLVFVSVGGLMRQSGCPEAHEKGMV 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1700 805 ProSiteProfiles cAMP/cGMP binding motif profile. 388 478 IPR000595 -
Acco04g1700 805 SMART cnmp_10 388 493 IPR000595 -
Acco04g1700 805 ProSiteProfiles Ankyrin repeat profile. 587 619 IPR002110 GO:0005515
Acco04g1700 805 Pfam Ion transport protein 65 315 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Acco04g1700 805 SUPERFAMILY Voltage-gated potassium channels 59 309 - -
Acco04g1700 805 Gene3D - 522 706 IPR036770 -
Acco04g1700 805 ProSiteProfiles KHA domain profile. 718 802 IPR021789 -
Acco04g1700 805 ProSiteProfiles Ankyrin repeat profile. 554 586 IPR002110 GO:0005515
Acco04g1700 805 CDD CAP_ED 388 481 IPR000595 -
Acco04g1700 805 ProSiteProfiles Ankyrin repeat region circular profile. 587 614 - -
Acco04g1700 805 SUPERFAMILY cAMP-binding domain-like 313 496 IPR018490 -
Acco04g1700 805 FunFam Potassium channel KAT2 376 500 - -
Acco04g1700 805 PRINTS EAG/ELK/ERG potassium channel family signature 101 111 IPR003938 GO:0005249|GO:0006813|GO:0016020
Acco04g1700 805 PRINTS EAG/ELK/ERG potassium channel family signature 112 121 IPR003938 GO:0005249|GO:0006813|GO:0016020
Acco04g1700 805 PRINTS EAG/ELK/ERG potassium channel family signature 300 309 IPR003938 GO:0005249|GO:0006813|GO:0016020
Acco04g1700 805 PRINTS EAG/ELK/ERG potassium channel family signature 256 273 IPR003938 GO:0005249|GO:0006813|GO:0016020
Acco04g1700 805 PRINTS EAG/ELK/ERG potassium channel family signature 77 84 IPR003938 GO:0005249|GO:0006813|GO:0016020
Acco04g1700 805 Gene3D Jelly Rolls 352 501 IPR014710 -
Acco04g1700 805 FunFam Potassium channel KAT3 66 310 - -
Acco04g1700 805 Pfam KHA, dimerisation domain of potassium ion channel 727 784 IPR021789 -
Acco04g1700 805 PANTHER POTASSIUM CHANNEL AKT1 31 785 IPR045319 GO:0005249|GO:0006813
Acco04g1700 805 ProSiteProfiles Ankyrin repeat profile. 652 684 IPR002110 GO:0005515
Acco04g1700 805 Gene3D - 65 310 - -
Acco04g1700 805 ProSiteProfiles Ankyrin repeat region circular profile. 652 684 - -
Acco04g1700 805 SUPERFAMILY Ankyrin repeat 526 708 IPR036770 -
Acco04g1700 805 SMART ANK_2a 652 681 IPR002110 GO:0005515
Acco04g1700 805 SMART ANK_2a 554 583 IPR002110 GO:0005515
Acco04g1700 805 SMART ANK_2a 521 550 IPR002110 GO:0005515
Acco04g1700 805 SMART ANK_2a 587 616 IPR002110 GO:0005515
Acco04g1700 805 Pfam Ankyrin repeats (3 copies) 626 705 IPR002110 GO:0005515
Acco04g1700 805 Pfam Ankyrin repeats (3 copies) 526 614 IPR002110 GO:0005515
Acco04g1700 805 PRINTS Ankyrin repeat signature 668 682 IPR002110 GO:0005515
Acco04g1700 805 PRINTS Ankyrin repeat signature 555 570 IPR002110 GO:0005515
Acco04g1700 805 ProSiteProfiles Ankyrin repeat region circular profile. 554 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1700 Acco-ChrAcco04 23079555 23086386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1700 31 787 Ion Channels AT4G32500 56.604 0.0 943