Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1674 ATGTCGAGCTGCAACATGGACGTTGGTTCTGAGAAACTATGCTATATCCACTGCAAATTTTGCAACATTGTTCTTGCGGTTAGTGTTCCATGCAGTAGTCTGTTTGACATCGTGACTGTCCGATGTGGTCACTGCACCAATCTATGGTCCGTGAACATGGCCGCCGCATTTCAGTCAGTGTCATGGCAACAAGTTCAGGCGTCGGGGTTATCCAATCCAGAGTACAGAATCGAGACTGGTTCGTCTTCCAGATGCAACAATAGGATTGCAATGAGAGCCCCCACCACCACACGTAATGCAACTGAGGAAAGAGTTGCGACTAGGCCTCCCGAGAAGAGGCAGCGCGTACCTTCTGCGTACAATCAGTTCATAAAAGAAGAGATTCAGAGGATCAAAGTCAATAACCCAGATATCAGTCACAGGGAGGCATTCAGTACTGCTGCAAAGAATTGGGCACATTTCCCTCACATTCATTTCGGGTTGATGCTGGAGACCAATAATCAAGCTAGGATTGGAAATGTAAGTACATCCATGAACTTTACCAACAATTGA 552 0.4638 MSSCNMDVGSEKLCYIHCKFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQSVSWQQVQASGLSNPEYRIETGSSSRCNNRIAMRAPTTTRNATEERVATRPPEKRQRVPSAYNQFIKEEIQRIKVNNPDISHREAFSTAAKNWAHFPHIHFGLMLETNNQARIGNVSTSMNFTNN 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1674 183 CDD HMG-box_SF 115 151 - -
Acco04g1674 183 Gene3D High mobility group box domain 104 157 IPR036910 -
Acco04g1674 183 PANTHER PROTEIN YABBY 6-RELATED 1 169 IPR006780 GO:0007275
Acco04g1674 183 Pfam YABBY protein 10 161 IPR006780 GO:0007275
Acco04g1674 183 FunFam axial regulator YABBY 5-like 99 157 - -
Acco04g1674 183 SUPERFAMILY HMG-box 103 154 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1674 Acco-ChrAcco04 22129439 22132807 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1674 5 172 C2C2-YABBY Transcription Factor Family AT2G26580 72.619 2.71e-87 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Acco04g1674 YABBY 5.8e-69 CL0114