Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1666 ATGAAGAAGTTGAGGAGAAAAGTTGGCAAGTATGAAGTGGGCCGTACCATTGGCGAAGGTACCTTTGCTAAAGTTAAATTTGCAAGAAACACAGAGACAGGGGAGAGCGTGGCTATTAAAATTATGTCTAAAAGCTCCATTCTTGAGCACAGAATGGTTGAACAGATTAAAAGAGAAATATCTATTATGAAAATTGTCAGGCATCCCAATATAGTCAGGTTGCATGAGGTTTTAGCTAGCCAGACTAAGATATTCATAATTCTTGAGTTTGTCATGGGAGGAGAACTATATGATAAAATTGTTCAGCAGGGGAAGCTTTCAGAAAATGAATCTAGGCGCTACTTTCAACAACTAATAGATGCTGTTGCTCATTGTCACAGTAAGGGTGTGTACCATAGAGACTTAAAGCCCGAAAATCTGCTTCTTGATGCCTTTGGGAATCTGAAGGTTTCTGATTTTGGACTGAGTGCCTTGACTAAGCAGGGCAATGGCCTCCTCCACACTACATGTGGAACCCCAAATTATGTTGCGCCAGAGGTTCTTAGCAATCAAGGTTATGATGGTGCAGCAGCTGATGTTTGGTCATGTGGAGTCATCCTATTCGTCCTTATGGCTGGATATCTTCCTTTTGAGGAGCCAAATCTACCAACTTTATTCAGAAGGATTAATGCTGCAGAATATACTTGCCCATTCTGGTTTTCCTCTGGGGCAAAGACATTCTTACATAAAATGTTGGATCCAAATCCTAAAACACGCATTCGGATTGAAGAAATAAGAAAAGATCCGTGGTTCAGTAAAAGTTATGTTCCTGTTAAACTTAGAAAAGATGAGGAAGTGAATTTGGATGATGTTCAGGCTGTTTTTGATAACATTGAGGACAAGTATGTAGCTGAACGGTCAGAACATACTGAGGGCAGTCCCTTGACAATGAATGCATTTGAGATGATAACTTTATCACAAGGATTGAATCTATCAACCCTATTTGATAGGCGTCAGGATTACATAAAGAGGCAAACCCGTTTTGTGTCTCGTAAGCCTGCAAAAGTTATAATTGCATCTGTTGAAGCTGTTGCAGAATCAATGCGCCTTAAGGTCCACCGTCGTTGTTACAAGATGAGGCTTGAAGGAACATCTGTGAATAACACTGGACAATTTGCAGTGGTTTTGGAGGTCTTTGAAGTTGCACCATCACTTTTCATGGTAGATGTTCGGAAGGCTTCTGGGGATACTCTTGAATATCACAAGTTTTACAAGAAACTTTGTGAAAAACTAGCAGACATTATTTGGAGACCAGCAGAGTCCATGCCAAATTCTGGTTTGCTTAGACAAATGACTTGCTAA 1341 0.4027 MKKLRRKVGKYEVGRTIGEGTFAKVKFARNTETGESVAIKIMSKSSILEHRMVEQIKREISIMKIVRHPNIVRLHEVLASQTKIFIILEFVMGGELYDKIVQQGKLSENESRRYFQQLIDAVAHCHSKGVYHRDLKPENLLLDAFGNLKVSDFGLSALTKQGNGLLHTTCGTPNYVAPEVLSNQGYDGAAADVWSCGVILFVLMAGYLPFEEPNLPTLFRRINAAEYTCPFWFSSGAKTFLHKMLDPNPKTRIRIEEIRKDPWFSKSYVPVKLRKDEEVNLDDVQAVFDNIEDKYVAERSEHTEGSPLTMNAFEMITLSQGLNLSTLFDRRQDYIKRQTRFVSRKPAKVIIASVEAVAESMRLKVHRRCYKMRLEGTSVNNTGQFAVVLEVFEVAPSLFMVDVRKASGDTLEYHKFYKKLCEKLADIIWRPAESMPNSGLLRQMTC 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1666 446 ProSiteProfiles NAF domain profile. 305 329 IPR018451 GO:0007165
Acco04g1666 446 SUPERFAMILY Protein kinase-like (PK-like) 8 282 IPR011009 -
Acco04g1666 446 Gene3D Transferase(Phosphotransferase) domain 1 91 291 - -
Acco04g1666 446 FunFam Non-specific serine/threonine protein kinase 2 90 - -
Acco04g1666 446 SMART serkin_6 11 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g1666 446 Pfam NAF domain 307 366 IPR004041 GO:0007165
Acco04g1666 446 Gene3D Kinase associated domain 1, KA1 304 430 - -
Acco04g1666 446 Pfam Protein kinase domain 11 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g1666 446 Gene3D Phosphorylase Kinase; domain 1 1 90 - -
Acco04g1666 446 ProSitePatterns Protein kinases ATP-binding region signature. 17 40 IPR017441 GO:0005524
Acco04g1666 446 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Acco04g1666 446 Coils Coil 274 294 - -
Acco04g1666 446 FunFam Non-specific serine/threonine protein kinase 4 305 - -
Acco04g1666 446 CDD CIPK_C 311 424 - -
Acco04g1666 446 ProSiteProfiles Protein kinase domain profile. 11 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g1666 446 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 8 419 - -
Acco04g1666 446 FunFam Non-specific serine/threonine protein kinase 304 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1666 Acco-ChrAcco04 21781784 21795572 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1666 1 372 CBL-interacting serine-threonine protein kinases AT5G35410 72.849 0.0 583
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Acco04g1666 Pkinase 3.6e-72 CL0016