Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1660 ATGCCCTTGAAGCTGCTCTTAGTGGGCCTTGATCATGCTACCCAAACTAGTATTCAGACATATCTTCCAACACCTTATTATCAAACCACTGCGTGTGACAGTGGTCTTGATGCCCTAAGCTACTTACGAGAGAAAGGACCTGATTCTTTTGACCTGGTGCTCAGTGATATCGCCTTGAAAGACATAGACGGCTACCAGTTCATCAGAGAGCAACACTTGAATCCAAATATTGCCCACGTTGCAATATGTGAGGATGAAAGATCAACTTCTGAGATCCTGACAGCATATAGAAGTCGTGCTTGCAGTGTTTTGTGGAAGCCAGTGAGTGGGCTGGGCGATGAGATTAAAAATTTATGGAAACATGTTTGTAGGAGGAGGGAACAGCGTGAGCATGAGAGCATGTCTCAGACTCACGACGCTGTACCGCAGAATCAGGGTTCTTCTTCTTCCCTATCTTTCATAGACACAAGTCTGGAAGAGTTTGTGACTCATGACGGAGAACCTCCCTCGAGGAAACGAGGGCGGGTATCCTGGAAGGACATCCATCCATTATTTGTTCATGCTGTGAATCAACTAGGCGGCCCTGAAAATGCAAAGCCAAGAGGGATTATTGAAATAATGAAAGTGCCTTGTCTAACGAGAGCTCATGTTGGAAGTCACTTACAGAAATTTAGAGACAGATTAAAGAGAGTGGAGGAAGAGCAGCAGCAATACTCAGTTTCTCACATGAACGGATCCCTTTTCTCGATGGAACCCCATCTTGATAATTACCAGCCAATACAAATGCAAATACAACCACCTGAACAAAACTTCAACAACTTTGGTCATGTGGTTCCAGCCTCAAGCTCTTCTTATTATATTACTACTACTGGAGGTGCTAATAATGATGGAATCATAGATAAACAACAAACCTGGGGTACTCCATTCGGAAGTAATATGCAGCAGCAACCGCAAATTGATACTTCCTTTCGTGGTAATCAAAATTTGACTTCCGATATGCAACAAGTGGATCAAAAACAAGCTTCAGGTTCTTCTTCTTATTTTAATGCAACTAGAATTGCTCATAATGAGGGAATCATAAATGAAAAACATGCCATGGGCACTTCATTTAGAAGTAATATGCAGCAGCAACCACAAATTTGCACTGAACTTATGCAACGACTAAATCAAAACCCAGCTTCAGGTCCTTCTTATTATCTTAGTACTACGGGAGGTGCTAATAATGATGGAATCATAAATCAGAAACAAGCCCTGGGTACTTCCTTTGGTAGTAATATGCTGCAGCAACCACAAATTGATACTTCCTTTGGGAGTAATCAAAACCTGACTTGTGTGCAACAACCGGATCAAGACCCAGCTTCAGGTTCTACTTCTTATGCTATTGCTGCTAGAGGCGCTAATAAGGATGGAATCATAAATCAAAATCAAGCTATTTCCTTTATAAGTGAGACGCCGCAGCAACCACAAATTGATACTTCCTTTGGGAGTAATCAAAACCTGATTTCCGGTATGCAACAACTGGATCAAAAAGTAGCATCAGTTTCTTCTTCTTATGTAAATGCTACTATAATTCCTCATAACGAAGGAATCATAAGTGAAAAACAAGACCTAGGTGCTTCATTTAGAAGTGATATGCAACAGCAACCCCAGATTGGCTCTAACCTTATTTCTAGTATGCAACAACTAAATCAAAACCCAGATTCAGATTCTTCTTATTATGTTAGTACCACGGGAGGTGCTAATAATTATGCAATCAAAAATCAGACACAAGCTCCAGGTACTTCGTTTGGCAGTAATAGGCCACAACAACCCCAGATTGGTACTCCTAATCTTAATAATGATGCAATCATAAATCAGACACTAGCCCCGGGTACTTCATATGGTAGTAATATGGCACAACAACCCCAGATTGGTACTTCCACTGGGAGTAATCAAAACCTGACTTATGGTATGCAACAACCAGATCAAGACCCAACTTCAGGTTCTACTTCTTATGCTACTGCGGCTGGAGGTGCTAATAATGATGGAACCATAAATCAAAATCAAGCTATTTCCTTTATGAGTGAGACGCTGCAGCAACCACAAATATCACATGATCAAAATCTAGAAGTAGGCGGTCATGATGGAATCATCAATCGAGAAGCAGGTGGCCAGGGTGGAATCATCAATACAGAAGCAACACATGCATGTTACTAA 2196 0.4126 MPLKLLLVGLDHATQTSIQTYLPTPYYQTTACDSGLDALSYLREKGPDSFDLVLSDIALKDIDGYQFIREQHLNPNIAHVAICEDERSTSEILTAYRSRACSVLWKPVSGLGDEIKNLWKHVCRRREQREHESMSQTHDAVPQNQGSSSSLSFIDTSLEEFVTHDGEPPSRKRGRVSWKDIHPLFVHAVNQLGGPENAKPRGIIEIMKVPCLTRAHVGSHLQKFRDRLKRVEEEQQQYSVSHMNGSLFSMEPHLDNYQPIQMQIQPPEQNFNNFGHVVPASSSSYYITTTGGANNDGIIDKQQTWGTPFGSNMQQQPQIDTSFRGNQNLTSDMQQVDQKQASGSSSYFNATRIAHNEGIINEKHAMGTSFRSNMQQQPQICTELMQRLNQNPASGPSYYLSTTGGANNDGIINQKQALGTSFGSNMLQQPQIDTSFGSNQNLTCVQQPDQDPASGSTSYAIAARGANKDGIINQNQAISFISETPQQPQIDTSFGSNQNLISGMQQLDQKVASVSSSYVNATIIPHNEGIISEKQDLGASFRSDMQQQPQIGSNLISSMQQLNQNPDSDSSYYVSTTGGANNYAIKNQTQAPGTSFGSNRPQQPQIGTPNLNNDAIINQTLAPGTSYGSNMAQQPQIGTSTGSNQNLTYGMQQPDQDPTSGSTSYATAAGGANNDGTINQNQAISFMSETLQQPQISHDQNLEVGGHDGIINREAGGQGGIINTEATHACY 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1660 731 Gene3D - 3 142 - -
Acco04g1660 731 Pfam Response regulator receiver domain 11 109 IPR001789 GO:0000160
Acco04g1660 731 NCBIfam myb-like DNA-binding domain, SHAQKYF class 175 227 IPR006447 GO:0003677
Acco04g1660 731 Gene3D - 170 232 - -
Acco04g1660 731 ProSiteProfiles Response regulatory domain profile. 4 121 IPR001789 GO:0000160
Acco04g1660 731 SUPERFAMILY Homeodomain-like 172 230 IPR009057 -
Acco04g1660 731 PANTHER TWO-COMPONENT RESPONSE REGULATOR 5 322 IPR045279 GO:0009736
Acco04g1660 731 SMART REC_2 3 119 IPR001789 GO:0000160
Acco04g1660 731 MobiDBLite consensus disorder prediction 584 677 - -
Acco04g1660 731 SUPERFAMILY CheY-like 3 131 IPR011006 -
Acco04g1660 731 MobiDBLite consensus disorder prediction 129 149 - -
Acco04g1660 731 Coils Coil 221 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1660 Acco-ChrAcco04 21646398 21649474 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1660 3 237 Response Regulator Gene Family AT4G31920 30.508 8.97e-24 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Acco04g1660 Response_reg 2.9e-07 CL0304