Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1659 ATGCAGCAATCTGCAGCCGAGCCCTGTCGTCAAACATATCTTCCAACACCTTATTATCAAACCACTGCGTGTGACAGTGGTCTTGATGCCCTAAGCTACTTACGAGAGAAAGGACCTGATTCTTTTGACCTGGTGCTCAGTGATATCGCCTTGAAAGACATAGACGGCTACCAGTTCATCAGAGAGCAACACTTGAACCCAAATATTGCCCACGTTGCAATATGTGAGGATGAAAGATCAACTTCTGAGATCCTGACAGCATATAGAAGTCGTGCTTGCAGTGTTTTGTGGAAGCCAGTGAGTGGGCTGGGCGATGAGATTAAAAATTTATGGAAACATGTTTGTAGGAGGAGGGAACAGCGTGAGCATGAGAGCATGTCTCAGACTCACGACGCTGTACCGCAGAATCAGGGTTCTTCTTCTTCCCTATCTTTCATAGACACAAGTCTGGAAGAGTTTGTGACTCATGACGGAGAACCTCCCTCGAGGAAACGAGGGCGGGTATCCTGGAAGGACATCCATCCATTATTTGTTCATGCTATGAATCAACTTGGCGGCCCTGAAAATGCAAAGCCAAGAGGGATTATTGAAATAATGAAAGTGCCTTGTCTAACGAGAGCTCATGTTGGAAGTCACTTACAGAAATTTAGAGACAGATTAAAGAGAATGGAGGAAGAGCAGCAGCATTACTCAGTTTCTCACATGAACGGATCCCTTTTCTCGATGGAACCCCATCTTGATAATTACCAGCCAATACAAATGCAAATACAACCACCTGAACAAAACTTCAACAACTTTGGTCATGTGGTTCCAGCCTCAAGCTCTTCTTATTATATTACTACTACTGGAGGTGCTAATAATGATGGAATCATAAATAAACAACAAACCTGGGGTACTCCATTCGGAAGTAATATGCAGCAGCAACCGCAAATTGATACTTCCTTTCGTGGTAATCAAAATTTGACTTCCGATATGCAACAAGTGGATCAAAAACAAGCTTCAGGTTCTTCTTATTTTAATGCAACTAGAATTGCTCATAATGAGGGAATCATAAATGAAAAACATGCCATGGGCACTTCATTTAGAAGTAATATGCAGCAGCAACCACAAATTTGCACTGAACTTATGAAACGACTAAATCAAAACCCAGCTTCAGGTCCTTCTTATTATCTTAGTACTACGGGAGGTGCTAATAATGATGGAATCATAAATCAGAAACAAGCCCTGGGTACTTCCTTTGGTAGTAATATGCTGCAGCAACCACAAATTGATACTTCCTTTGGGAGTAATCAAAACCTGACTTATAGTGTGCAACAACCGGATCAAGACCCAGCTTCAGGTTCTACTTCTTATGCTATTGCTGCTAGAGGCGCTAATAAGGATGGAATCATAAATCAAAATCAAGCTATTTCCTTTATAAATGAGACGCCGCAGCAACCACAAATTGATACTTCCTTTGGGAGTAATCAAAACCTGATTTCCGGTATGCAACAACTGGATCAAAAAGTAGCATCAGTTTCTTCTTCTTATGTAAATGCTACTATAATTCCTCATAACGAAGGAATCATAAGTGAAAAACAAGACCTAGGTGCTTCATTTAGAAGTGATATGCAACAGCAACCCCAGATTGGCTCTAACCTTATTGTATGCAACAACTAA 1659 0.4117 MQQSAAEPCRQTYLPTPYYQTTACDSGLDALSYLREKGPDSFDLVLSDIALKDIDGYQFIREQHLNPNIAHVAICEDERSTSEILTAYRSRACSVLWKPVSGLGDEIKNLWKHVCRRREQREHESMSQTHDAVPQNQGSSSSLSFIDTSLEEFVTHDGEPPSRKRGRVSWKDIHPLFVHAMNQLGGPENAKPRGIIEIMKVPCLTRAHVGSHLQKFRDRLKRMEEEQQHYSVSHMNGSLFSMEPHLDNYQPIQMQIQPPEQNFNNFGHVVPASSSSYYITTTGGANNDGIINKQQTWGTPFGSNMQQQPQIDTSFRGNQNLTSDMQQVDQKQASGSSYFNATRIAHNEGIINEKHAMGTSFRSNMQQQPQICTELMKRLNQNPASGPSYYLSTTGGANNDGIINQKQALGTSFGSNMLQQPQIDTSFGSNQNLTYSVQQPDQDPASGSTSYAIAARGANKDGIINQNQAISFINETPQQPQIDTSFGSNQNLISGMQQLDQKVASVSSSYVNATIIPHNEGIISEKQDLGASFRSDMQQQPQIGSNLIVCNN 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1659 552 SUPERFAMILY CheY-like 13 123 IPR011006 -
Acco04g1659 552 ProSiteProfiles Response regulatory domain profile. 1 113 IPR001789 GO:0000160
Acco04g1659 552 Gene3D - 162 224 - -
Acco04g1659 552 SUPERFAMILY Homeodomain-like 164 222 IPR009057 -
Acco04g1659 552 PANTHER TWO-COMPONENT RESPONSE REGULATOR 19 311 IPR045279 GO:0009736
Acco04g1659 552 MobiDBLite consensus disorder prediction 121 141 - -
Acco04g1659 552 NCBIfam myb-like DNA-binding domain, SHAQKYF class 167 219 IPR006447 GO:0003677
Acco04g1659 552 Coils Coil 213 233 - -
Acco04g1659 552 Gene3D - 10 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1659 Acco-ChrAcco04 21637993 21640135 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1659 30 229 Response Regulator Gene Family AT3G16857 35.319 1.18e-23 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Acco04g1659 None None None