Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1650 ATGTCTATTTTCTTCATCTACAAGCGTCAAGTCCATTCGTACAGAAAGATATCTGCAAGTGCAAATCTAGGATTCACTGAGGATTGTAGTCTACGAATTTTTTCCTTTGATGAGCTAGCAGATTCAACAGGAAACTTCACAGAAGAGATCGAAAGATGCTTTACATCTGTTAAAGTTGACGTCTACAGCTACGGTGTGGTACTGTTGGAGATAATATGTTGCAGAAGGAATATAGACGTGAATGTGGCTTCAGAAGAGGAAATAATGCTTTCAAGTTGGGTGTATAATTGCTTTGTGAGAGGAGAATTGAATAAATTAGTAGAATTGGATGAAGATGTGGAATGGAGGACATTGGAGAGAATGGTAAAGGTGGCGTTATGGTGTATCCAAGAGGACTTGTCTTTGCGACCTTCAATGAGGAGAGTGATATTGATGCTTGAAGGTTTGAAGGATATTCCAATTCCTCCATCTCCAACCCCTCTAGTTTGA 489 0.3947 MSIFFIYKRQVHSYRKISASANLGFTEDCSLRIFSFDELADSTGNFTEEIERCFTSVKVDVYSYGVVLLEIICCRRNIDVNVASEEEIMLSSWVYNCFVRGELNKLVELDEDVEWRTLERMVKVALWCIQEDLSLRPSMRRVILMLEGLKDIPIPPSPTPLV 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1650 162 Gene3D Transferase(Phosphotransferase) domain 1 38 155 - -
Acco04g1650 162 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 56 157 - -
Acco04g1650 162 SUPERFAMILY Protein kinase-like (PK-like) 50 158 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1650 Acco-ChrAcco04 21454468 21455465 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1650 56 158 Receptor kinase-like Gene Family AT5G38280 39.252 8.29e-17 74.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Acco04g1650 None None None