Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1649 ATGGCTTCCATTACTTCAAACATGTACTTTCTTCTATTACTATCTTTTCTATGGGGAAGATTTGAAATAGTATCTGCAAAGGTAATTCCACTCGGTGCTTCTCTTTCTCCCACTATTCAACCCACTTCATGGCCTTCACCTTCTGGTCGATTTGCATTTGGCTTTTATAAGCAAGGCAATGGCTTCAAACTTGGAACTTGGTTGGTCGGTGATGATTCTACTAACACAATCGTGTGGACAGCAAATCGTGATTACCCTCCAGTCTCCTCAAGTTCAAGGTTATTTCTGACCATGAACGGTGAGCTTCTTCTTCAAATAGATCTAAGGCAAAAGAAGCGTGTTGCTCATAGTGATAATGGAACTGTTTATTCTGCCTCCTTGCTTGATTCTGGAAACTTGGTATTACAAGACAAAAGCTCCAACTTCCTTTGGCAGAGTTTTGATTTTCCCACTGATACAATTTTAGGAAGTCAAGTTCTGAAAACTAAGCGTAGATTGGTTTCTAGCTCATCAAACACCAACCAATCTTCAGGAAAGTTTCAGCTCATAATGCAAGATGATGGAAACCTTGTTATGTATCCAGCTTACCCATTTGTCACACCAACAGATGCCTATTGGGCCACCATGACTGTTAATGGAGAAGGTTCCAAATTTTATCTTTCACTTGAAAACACATCTCCTTTTCTACGTATCTTAGATGCTAATCGTTCCAACATGCTCATAAAGGAACTAGATGATGGTGATTCCTCAACTTCAAAAAGCGACGGAAACAACACCATTTATCGTGCAACCATTGATTCTAATGGAGTTTTTCAACTCTTTGCTCATTTTGATGATAAGATTGGAAAACGCCAAGTTAGAAGTGTGTGGTCAGCTTTGGATGTCTGTGATGTGAAGGATTTTTGTGGGTTCAATAGTTATTGCACATACTTAGATGATAGACCCTTCTGTGATTGTCTTCCTGGAACTGATTATATAGATCAGAGTCAAAATAATCTTGGATGCATAAGGAACTTCTCAGATGTTGGGTGTAGAGATGGAGGAGATAATACGGCTTTGTATTCCATGTATGGTATGAATAGCATGTCTTGGAGTGATGCTCCTTACTTTGAAGAACCAATTCTTGAGGGGGATTGTATGGATTCTTGCTTGAAAGATTGTTATTGTGGAGCTGCAATGTATGAAGATGAGCGATGCAAGAAACAAAAGCTTCCATTAAGATATGTTAGAAGGAAAACACAAGGGTCTTCCAACACAATATACTTCAAGGTGGGGAAAGTAAGCCTCAAAAGCAACAGTACGTCTTCCATATCTAAACCTCCCATCAAGAAAACAAGTGAGAAAGCTATTCTTCTGATCATTCTTGTCATCTTGGGTTTTGCCATTCTTTTGTGTTCTGGTGTTGCAATCTCTGGCCATTTAATTTACAAAATTGGGATTTTGAGTTACAAGAGGTTGCTGGAGGTTGGAGATTTGGGCTTGAATGAAGGGATTACTCTGAGGGTATTTTCGTACAATGAGTTGAAAAAAGCAACGAATGGTTTCAAACAAGAGTTGGGTAAGGGTTCATTTGGATCAGTTTATAAAGGAAGTTTACACAAAGGGAGAAGACTTATTGCAGTAAAAAGACTAGAGAAGTTAGCTTCTGGTTATGAGTTCATGAGCAATCGTTCCCTTGATAAGCTTATCTTTGGTAATAGTACCGTACGTCCAGATTGGGATCAGAGAAGAAGAATAGCACTAGACATTGCAAAAGGGTTACTGTATCTGCATGAAGAATGTGGAGCTCCCATTATTCACTGTGACATAAAGCCTCAAAACATATTGATGGACGAGTTTTGGACAGCTAAAATATCAGACTTTGGGTTAGCAAAACTTCTAATGCCAGAACAAACAAGGACCTTCACTGGGGTTAGAGGGACAAGAGGATACTTAGCTCCAGAATGGCAGAAAAACAATCCAATAACAGTGAAAGCAGATGTTTATAGCTATGGAATAATGCTTTTGGAGATTCTATTTTGTAGAAGAAACATGGTGGTTACTGTGTCGCATCCAGAGCAAGTTGTTCTATCCACTTGGGCCTACAGTTGCTTTGTTAAGAGAGAGTTAAAAAAGCTTGTTCCTGGGGAACAAGTGGATAACACGTTGCTGGAGAATATGGTGAAAGTGGGACTTTGGTGTATTCAAGATGAATCTTTTCTTAGGCCATCAATGAAGAGTGTTGTGTTGATGCTTGAAGGAGTTACTGATGTCGCTATTCCTCCATGTCCATCTGCTGGTTGTATGTGA 2289 0.3936 MASITSNMYFLLLLSFLWGRFEIVSAKVIPLGASLSPTIQPTSWPSPSGRFAFGFYKQGNGFKLGTWLVGDDSTNTIVWTANRDYPPVSSSSRLFLTMNGELLLQIDLRQKKRVAHSDNGTVYSASLLDSGNLVLQDKSSNFLWQSFDFPTDTILGSQVLKTKRRLVSSSSNTNQSSGKFQLIMQDDGNLVMYPAYPFVTPTDAYWATMTVNGEGSKFYLSLENTSPFLRILDANRSNMLIKELDDGDSSTSKSDGNNTIYRATIDSNGVFQLFAHFDDKIGKRQVRSVWSALDVCDVKDFCGFNSYCTYLDDRPFCDCLPGTDYIDQSQNNLGCIRNFSDVGCRDGGDNTALYSMYGMNSMSWSDAPYFEEPILEGDCMDSCLKDCYCGAAMYEDERCKKQKLPLRYVRRKTQGSSNTIYFKVGKVSLKSNSTSSISKPPIKKTSEKAILLIILVILGFAILLCSGVAISGHLIYKIGILSYKRLLEVGDLGLNEGITLRVFSYNELKKATNGFKQELGKGSFGSVYKGSLHKGRRLIAVKRLEKLASGYEFMSNRSLDKLIFGNSTVRPDWDQRRRIALDIAKGLLYLHEECGAPIIHCDIKPQNILMDEFWTAKISDFGLAKLLMPEQTRTFTGVRGTRGYLAPEWQKNNPITVKADVYSYGIMLLEILFCRRNMVVTVSHPEQVVLSTWAYSCFVKRELKKLVPGEQVDNTLLENMVKVGLWCIQDESFLRPSMKSVVLMLEGVTDVAIPPCPSAGCM 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1649 762 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 212 IPR036426 -
Acco04g1649 762 PIRSF SRK 1 550 IPR024171 GO:0004674
Acco04g1649 762 PIRSF SRK 551 762 IPR024171 GO:0004674
Acco04g1649 762 Pfam Protein kinase domain 552 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g1649 762 ProSitePatterns Protein kinases ATP-binding region signature. 519 542 IPR017441 GO:0005524
Acco04g1649 762 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 554 753 - -
Acco04g1649 762 FunFam Serine/threonine-protein kinase 150 286 - -
Acco04g1649 762 Gene3D Transferase(Phosphotransferase) domain 1 558 752 - -
Acco04g1649 762 ProSiteProfiles Protein kinase domain profile. 472 748 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g1649 762 SMART blect_4 35 150 IPR001480 -
Acco04g1649 762 SMART serkin_6 513 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g1649 762 ProSitePatterns Serine/Threonine protein kinases active-site signature. 598 610 IPR008271 GO:0004672|GO:0006468
Acco04g1649 762 CDD B_lectin 46 150 IPR001480 -
Acco04g1649 762 Gene3D - 151 295 - -
Acco04g1649 762 ProSiteProfiles Bulb-type lectin domain profile. 26 148 IPR001480 -
Acco04g1649 762 Gene3D - 26 147 IPR036426 -
Acco04g1649 762 Pfam D-mannose binding lectin 76 163 IPR001480 -
Acco04g1649 762 Gene3D Phosphorylase Kinase; domain 1 494 557 - -
Acco04g1649 762 SUPERFAMILY Protein kinase-like (PK-like) 498 746 IPR011009 -
Acco04g1649 762 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 551 757 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1649 Acco-ChrAcco04 21418412 21420807 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1649 503 755 Receptor kinase-like Gene Family AT5G20050 36.039 2.41e-50 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Acco04g1649 Pkinase 4.5e-29 CL0016