Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1646 ATGGCCTCCATAACTCTGTTCTTACTATTCGCAGTTCTATCTGCAAACGAAGTTAGAGCTCAAAAATATAATTCCAACATCATAAATTTGGGTTCTTCTCTCTCCCCAAAAACGAATTCTGTTTTATGGATTTCACCATCGGGTCTTTTTTCCTTCGGCTTTTATCCACAAGATGATGGCTTTTCCGTTGGAATACGACTAAAGGGTGAACGTGAAGGAACAATCGTTTGGACACCTAACTTGAAAAATCTATCTGCTTCCTCTGATTCAGTAATGGAATTAACCAAAGACGGTCAAGTTGTGCTTAGAAACGAGCCAAAACAGATAGAAGTAGTCATTGCTAATGCGTCTGAGCCTGCAGATTCAGCATCTATGCTTGATTCTGGGAATTTCGTGCTTTATAGCAAAAACCATAGTGTCATCTGGCAAAGCTTTGATCACCCCTCGGACACCTTACTAGCAGGTCAGAATTTATCCCGTCCAGAACAATTGGTCTCTGCAAATGGACATTTTATTCTCAGAATGCACAATGATGGAAATCTCGCTTCCTTCCCTGTGAACGATCAAAGAGGAGAAGGTATTTACTGGATTCAGGGAGGCATCTCAATGCTTAATCTTAATCTTACAGGCTTTCTTTGCTTACTCGATGATGATGGGAAACCCACTAAGGTTCTGGCCAACAGTAGCAACCATCTTCGAAGAAACACGAGCTTAATCTATCGTGCAACCTTGGATTTGGATGGTAACTTTAGATTGTATGTTCACACATTTGAGAAGAATTCTACTAGATTTGTCAATGTTCAGCCTGTGTGGCAGTCTAATTCTAATCAATGTGAAGTCAAGGGATTTTGTGGTTTCAACAGTTATTGTTCAATTTCATTTGTTGGCTTACTCTTTGCAATGTCTATTTTCTTCATCTACAAGCGTCAAGTCCATTCCTACAGAAAGCTATCTGCAAGTGCGAATCTAGGATTCACTGACGATTGTAGTCTACGAATATTTTCTTTTGATGAATTGGTGAATGCAACAGGAAACTTCACAGAAGATATCGGCAGAGGATCTTCTGGAGTGGTTTACAAGGGGGAAATTCAAGGAAACAATAGAAGGATAGCTGTGAAGAAGCTAGACGACGTTGTTGTTGACGAAGGAGAAAGAGAATTTCAAGCTGAAATCACTACAATCGCTAGAACTTATCACACAAAAATATCAGATTTTGGACTTGCGAGACTATCAATTCCAGAACATTCAAGAATCGGATATAGCAACGAACTAACAAGTGGCAATGTTGCACCGGAACGTCAGAAAGATGTATTAACATCCAAAAACATTGACATCTACAGCTACGGCGTGGTGCTGCTAGAGATAATATGTTGCAGAAGAAATATAGATGTGAATGTGGCTACAGAAGAGGAAATAATGCTTTCAAGTTGGGTTTATAAATTCTTTGTGAAAGGGGAATTGAACAAATTGGTAGAATTAGATGAAGATGTGGAATGGAGGACACTAGAGAGAATGGTGAAGGTGGCGTTATGGTGTGTCCAAGAGGACTTGTCTCTGCGTCCCTCCATGAAGAACGTGATATTGATGATGGAAGGGTTGAAGGATATTCCAATTCCTCCATCTCCAATCCCACTTGCATGA 1641 0.4004 MASITLFLLFAVLSANEVRAQKYNSNIINLGSSLSPKTNSVLWISPSGLFSFGFYPQDDGFSVGIRLKGEREGTIVWTPNLKNLSASSDSVMELTKDGQVVLRNEPKQIEVVIANASEPADSASMLDSGNFVLYSKNHSVIWQSFDHPSDTLLAGQNLSRPEQLVSANGHFILRMHNDGNLASFPVNDQRGEGIYWIQGGISMLNLNLTGFLCLLDDDGKPTKVLANSSNHLRRNTSLIYRATLDLDGNFRLYVHTFEKNSTRFVNVQPVWQSNSNQCEVKGFCGFNSYCSISFVGLLFAMSIFFIYKRQVHSYRKLSASANLGFTDDCSLRIFSFDELVNATGNFTEDIGRGSSGVVYKGEIQGNNRRIAVKKLDDVVVDEGEREFQAEITTIARTYHTKISDFGLARLSIPEHSRIGYSNELTSGNVAPERQKDVLTSKNIDIYSYGVVLLEIICCRRNIDVNVATEEEIMLSSWVYKFFVKGELNKLVELDEDVEWRTLERMVKVALWCVQEDLSLRPSMKNVILMMEGLKDIPIPPSPIPLA 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1646 546 Pfam D-mannose binding lectin 74 160 IPR001480 -
Acco04g1646 546 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 197 IPR036426 -
Acco04g1646 546 SUPERFAMILY Protein kinase-like (PK-like) 331 541 IPR011009 -
Acco04g1646 546 SMART blect_4 34 148 IPR001480 -
Acco04g1646 546 Gene3D Transferase(Phosphotransferase) domain 1 401 525 - -
Acco04g1646 546 Pfam Protein kinase domain 397 526 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g1646 546 SMART tyrkin_6 344 530 IPR020635 GO:0004713|GO:0006468
Acco04g1646 546 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 295 399 - -
Acco04g1646 546 Gene3D - 21 145 IPR036426 -
Acco04g1646 546 Gene3D - 146 277 IPR036426 -
Acco04g1646 546 Gene3D Phosphorylase Kinase; domain 1 308 400 - -
Acco04g1646 546 ProSiteProfiles Bulb-type lectin domain profile. 25 146 IPR001480 -
Acco04g1646 546 ProSitePatterns Protein kinases ATP-binding region signature. 350 374 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1646 Acco-ChrAcco04 21326041 21328374 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1646 401 543 Receptor kinase-like Gene Family AT5G38280 37.419 2.84e-18 86.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Acco04g1646 Pkinase 2.9e-09 CL0016