Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1645 ATGGCGCCTGCCCTTGCAGCAAACCTATACTTTCTCCTTTTTGTATATCTTCTATGTGAAACAGTATTCACACAAGAAATACAACTTGGCTCTTCAATTTCCCCCACTGATCCTACCACTTCATGGCCTTCACCTTCAGGTCGATTCGCATTTGGCTTTTACGAGCAAGGCGATGGTTTCAAAGTTGGAATCTGGCTGTCCGATGGGATTAATAAAACAATCGTCTGGACTGCGAATCGTAATGACCCTCCTGTCTCCTCAAAGTCAATGGTTAATCTAACCAGAAACGGTGAGCTTCTTCTGCAAACAGAACCAGGGAAAAAGAAGGTAATTGCTCATGGTAACAATGGAGCTGTTTTCTATGCTTCCATGCTTGATTCTGGAAACTTTGTTCTACAAAACGAAACTTTGGGCTTCCTTTGGCAGAGTTTCTATTACCCAACTGATACTTTGTTAGGGGGCCAAATTCTACTTGGTGGGAGTGAATTGGTGTCTAGTTCATCAGAGACCAACCAATCTTCTGGAAGGTTTCAACTCTCGATGCAGGTTGATGGAAACCTTGTTCTGTATCCACGATATTCTGACGCTCGCACATCGTGGGATGCTTACTGGGCCTCTAATAGTAATGATGTCACTAGTTTCAAATATTATCTTTTCCTCAACAGCACAGATCCTCGGCCTCTATGTATTGTAAATGCCAGTAGTTCCAACTCCGAAATACTTTGGCAACAGGGTGGTAGCAGCTTCGAAGGAAACAACACTATTTATCGTGCAACTATTGATTCTGATGGAGTTTTTCGACTCTATGCTCATTTTGATGATGCAAATCGGGAACATCAAGTCAAAGAGTTATGGTCACCGACGGAGTTGAACAATCAATGCAACGTGAAGAGTTTCTGTGGGTTAAACAGCTATTGCACCTTCTTGGACAACCAGCCTTCTTGCAATTGCCTTCCCGGAACAAATTTTGTAGATCCGAGTCAAACAAATCTTGGGTGCAAAAGGAACTTCTCAGAAGCTGAATGTAAAGAAGGGAAAGATAACGCAACTTTCTATCACATGATCCCTATGCTAAGTATGAATGTGGATGATCCTTATGTAGAGGAATACAACCTTCTGGAGGAGGAATGCCGATCTTCTTGTTTGCAAGATTGTTACTGTGGGGCTGTCTTTTATGAAAATAATCGGTGCAGAAAACAAAAGCTGCCATTAAGATATGTTACAAGAGTCACACAAGGGTCCTCCTCCTACGCAATGTACTTCAAGGTGGGAATTCAAAGCCTCAAAAGCAACACCAATATCGAAAGCCAACCACCTCCCATCAAGACTACCAGTAAGAAAGCAATTGTTCAGATCATAGTTGTCATCTTTGGTTTTGCTATTCTTTTTTGTTCAGCTGTTACAATATCTACTCGATTTATATACAAGATTAGAGTTTTAAGTTACAAGAGGTTGTTGGAGATTGGAGATTTGGGTTTGAACGAGGGGGTTGTTACTCTAAGGTTATTTTCATACAATGAGCTGAAGAAAGCAACAGATCGTTTCAGACAGGAGGTGGGTAAGGGTTCCTTCGGATCAGTTTATAAAGGAACTTTACACAAAGGAAGCATATTGATTGCCGTAAAAAGGCTACACAATTTATCTGAAGAAGGGGAGAAAGAATTTCAAGCTGAAATGCAAGCCATTGGTAAAACAAACCACAAAAACTTAGTTCGCCTGCTGGGATATTGTGCCGAGGGATCTAAAAGGCTTCTGGTTTATGAGTACATGAGTAATGGCTCCCTTGAGAAGCTTATCTTTGGTGACAGTACCATACGTCCTGATTGGGATCAGAGAAGAAGAATAGCACTGGAAATTGCAAGAGGGTTACTGTATTTGCATGAAGAATGTGGGGCTCCTATCATTCACTGTGATATAAAGCCTCAAAACATATTGATGGATGAGTTTTGGACGGCTAAAATATCAGACTTTGGCTTAGCAAAACTTCTAATGCCAGATCAAACAAGAACCTTCACTCAAGTTAGAGGGACAAGAGGTTATTTGGCTCCAGAATGGAACAAAAACACTCCAATAACAGTGAAAGCAGATGTTTATAGCTACGGAATAATGCTCCTAGAGATTGCATTTTGCAGAAGAAACTTAGTGGTTAACATTTCAAATCCAGAGCAAATTGTTCTTTGTAATTGGGTGTATAAGTGTTTTGTTCAACGAGAGTTACATAAGCTTGTTCTTGGGGAAGAAGTGGACCTAACGTTGCTAGAGAATTTGGTGAAAGTGGGGATATGGTGTATTCAAGATGAACCTTTTCTTCGGCCATCAATGAAGAGTGTGGTGTTGATGCTTGAAGGTGTTTCGGAGGTGGCTATTCCTCCTTGTCCATATTCCAATTCTACGTGA 2397 0.4101 MAPALAANLYFLLFVYLLCETVFTQEIQLGSSISPTDPTTSWPSPSGRFAFGFYEQGDGFKVGIWLSDGINKTIVWTANRNDPPVSSKSMVNLTRNGELLLQTEPGKKKVIAHGNNGAVFYASMLDSGNFVLQNETLGFLWQSFYYPTDTLLGGQILLGGSELVSSSSETNQSSGRFQLSMQVDGNLVLYPRYSDARTSWDAYWASNSNDVTSFKYYLFLNSTDPRPLCIVNASSSNSEILWQQGGSSFEGNNTIYRATIDSDGVFRLYAHFDDANREHQVKELWSPTELNNQCNVKSFCGLNSYCTFLDNQPSCNCLPGTNFVDPSQTNLGCKRNFSEAECKEGKDNATFYHMIPMLSMNVDDPYVEEYNLLEEECRSSCLQDCYCGAVFYENNRCRKQKLPLRYVTRVTQGSSSYAMYFKVGIQSLKSNTNIESQPPPIKTTSKKAIVQIIVVIFGFAILFCSAVTISTRFIYKIRVLSYKRLLEIGDLGLNEGVVTLRLFSYNELKKATDRFRQEVGKGSFGSVYKGTLHKGSILIAVKRLHNLSEEGEKEFQAEMQAIGKTNHKNLVRLLGYCAEGSKRLLVYEYMSNGSLEKLIFGDSTIRPDWDQRRRIALEIARGLLYLHEECGAPIIHCDIKPQNILMDEFWTAKISDFGLAKLLMPDQTRTFTQVRGTRGYLAPEWNKNTPITVKADVYSYGIMLLEIAFCRRNLVVNISNPEQIVLCNWVYKCFVQRELHKLVLGEEVDLTLLENLVKVGIWCIQDEPFLRPSMKSVVLMLEGVSEVAIPPCPYSNST 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1645 798 FunFam Serine/threonine-protein kinase 147 281 - -
Acco04g1645 798 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 590 789 - -
Acco04g1645 798 Gene3D - 21 145 IPR036426 -
Acco04g1645 798 SUPERFAMILY alpha-D-mannose-specific plant lectins 172 270 IPR036426 -
Acco04g1645 798 SMART serkin_6 513 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g1645 798 ProSitePatterns Protein kinases ATP-binding region signature. 519 542 IPR017441 GO:0005524
Acco04g1645 798 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 208 IPR036426 -
Acco04g1645 798 ProSitePatterns Serine/Threonine protein kinases active-site signature. 634 646 IPR008271 GO:0004672|GO:0006468
Acco04g1645 798 ProSiteProfiles Protein kinase domain profile. 513 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g1645 798 CDD STKc_IRAK 519 783 - -
Acco04g1645 798 Gene3D - 147 299 - -
Acco04g1645 798 FunFam S-receptor-like serine/threonine-protein kinase 490 589 - -
Acco04g1645 798 SMART blect_4 24 147 IPR001480 -
Acco04g1645 798 Pfam Protein kinase domain 516 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g1645 798 Pfam D-mannose binding lectin 73 155 IPR001480 -
Acco04g1645 798 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 34 793 - -
Acco04g1645 798 ProSiteProfiles Bulb-type lectin domain profile. 148 281 IPR001480 -
Acco04g1645 798 Gene3D Phosphorylase Kinase; domain 1 493 589 - -
Acco04g1645 798 Gene3D Transferase(Phosphotransferase) domain 1 590 788 - -
Acco04g1645 798 FunFam Serine/threonine-protein kinase 23 146 - -
Acco04g1645 798 SUPERFAMILY Protein kinase-like (PK-like) 497 782 IPR011009 -
Acco04g1645 798 PIRSF SRK 1 798 IPR024171 GO:0004674
Acco04g1645 798 ProSiteProfiles Bulb-type lectin domain profile. 24 145 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1645 Acco-ChrAcco04 21310586 21312982 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1645 503 791 Receptor kinase-like Gene Family AT5G20050 42.395 1.48e-67 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Acco04g1645 Pkinase 2.5e-49 CL0016