Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1643 ATGAATAGTTATTGCTCCAACGTCTCTGGTAAAGGTGAATGTAAGTGTTATCCTGGATTTAGGCCAATCAATGGCAACAAAAACAAAAACATGTTCTTGGTTTGTGAACGGATGATAAAAAATGACTGTATCACCAGTGGTCCAGGGATGCTATACAATGTTAGTAACCCATTGCAACATATGCAGTGGGGCCTTCATCCTTATTTGGTCATACCATTGGAAGTGGAAGCTTGTGGCAAGTCTTGCATGGAAGACTGTGATTGTGGGGCAGCGTTACATGGAGATGGTAACTGCAACAAGTATAGGCTTCCGCTTATGTTTGGCAGGATTAATCAAAGTATATCAACCACAGCCCTCTTCAAGTTGCCTTCACCAATTATCATTCCTTCAAAACCAAAGAAGCCAGAGGTTCTTGTTGAAGACAAAAAAAATCTGATTCTGACTCTGGCCATCACTCTTAGTTCAATTTCATTCGTTTGCTTAGGCTTTTTAGTATCTATTTTCATCATCTACATGCGAAAAGTCAATTTATACAAAAAGCTCTCTGCCAATAGTGAAAATTTGGGGTTCGCTGAGGATTATAGTTTACGAACATTTGCCTTTAATGAATTGGCGAATGCAACAGGAAACTTCTCAGAAGAGATCGGTAGAGGATCTTTTGGAGTAGTTTACAAGGGGACAATTCGTGGAAGCAACATAAGGATTGCTGTGAAGAAACTAAACGATGAAGTTGTGGATGAAGGAGAAAGAGAATTTCAAGCAGAAATCACAGCAATCGCTCGAACTCATCATAGAAATCTGGTTCAACTCATTGGTTATTGCATTGATGGTTCCAGAAAGCTTCTTGTTTACGAATATATGAGCAATGGGTCTCTAGCATATTTTTTGTTCAAGCCTGAGATGCATCTATCTTGGAAACAGAGAGTCAAAATTGCATTGGATGTAGCAAGGGGAGTCTTATATCTACACGAAGAATGTGAAGTCTATATTGTCCACTGCAATATCATGTCTTGTGACATTCTTTTGGATGAAATGTGGACAGCAAAAATATCAGATTTTGGATTTGCAAGACTATCAATACGAGAACATTCAGAAACCAAAAGTAACAATGAATCATCAAGTGGATATGTGGCGCCGGAACGCCAGAAGGATGCATCAACATCCATAAAAGTTGACATCTTCAGCTACGGCGTGGTGTTATTGGAGATAATATGTTGTAGAAGGAATATAGATGTGAAAGTGGCTTCAGAAGAGGAAATAATGCTTTCAAGTTGGGTTTATAATTGCTTTGTGAGAGGAGAATTGAACAAATTGGTAGAATTAGATGAAGATGTGGAATGGAGGACATTGGAAAGAATGGTGAAGGTGGCGTTATGGTGTGTCCAAGAAGACTTGTCTCTACGTCCTTCAACGAAGAATGTGATATTGATGTTGGAAGGGCTGAAAGATATTCCAGTTCCTCCATCTCCAATCCCACTTGCTTGA 1485 0.3926 MNSYCSNVSGKGECKCYPGFRPINGNKNKNMFLVCERMIKNDCITSGPGMLYNVSNPLQHMQWGLHPYLVIPLEVEACGKSCMEDCDCGAALHGDGNCNKYRLPLMFGRINQSISTTALFKLPSPIIIPSKPKKPEVLVEDKKNLILTLAITLSSISFVCLGFLVSIFIIYMRKVNLYKKLSANSENLGFAEDYSLRTFAFNELANATGNFSEEIGRGSFGVVYKGTIRGSNIRIAVKKLNDEVVDEGEREFQAEITAIARTHHRNLVQLIGYCIDGSRKLLVYEYMSNGSLAYFLFKPEMHLSWKQRVKIALDVARGVLYLHEECEVYIVHCNIMSCDILLDEMWTAKISDFGFARLSIREHSETKSNNESSSGYVAPERQKDASTSIKVDIFSYGVVLLEIICCRRNIDVKVASEEEIMLSSWVYNCFVRGELNKLVELDEDVEWRTLERMVKVALWCVQEDLSLRPSTKNVILMLEGLKDIPVPPSPIPLA 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1643 494 SUPERFAMILY Protein kinase-like (PK-like) 190 489 IPR011009 -
Acco04g1643 494 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 2 489 - -
Acco04g1643 494 ProSiteProfiles Protein kinase domain profile. 209 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g1643 494 FunFam Putative receptor-like protein kinase 287 486 - -
Acco04g1643 494 Gene3D Phosphorylase Kinase; domain 1 182 286 - -
Acco04g1643 494 ProSitePatterns Protein kinases ATP-binding region signature. 215 239 IPR017441 GO:0005524
Acco04g1643 494 Pfam Protein tyrosine and serine/threonine kinase 211 410 IPR001245 GO:0004672|GO:0006468
Acco04g1643 494 Gene3D Transferase(Phosphotransferase) domain 1 287 487 - -
Acco04g1643 494 FunFam S-receptor-like serine/threonine-protein kinase 178 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1643 Acco-ChrAcco04 21169619 21171103 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1643 141 494 Receptor kinase-like Gene Family AT5G10530 34.332 6.98e-64 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Acco04g1643 PK_Tyr_Ser-Thr 3.2e-44 CL0016