Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1641 ATGGCTACCGTTGCATCATCAAACATATACTCTCTCTTTTTGGTATATTTTCTATGTGAAACAGTATTCACACAACACATACCACTGGGCTCTTCACTTTCCCCCATTGTTCCTCCCATTTCAAGGCTTTCACCTTCACGTCGATTCGCATTCGGCTTTTACGAGCAAGGCGATGGCTTCAAAGTTGGAATCTGGTTGTTCAATGAGAATAATAAAACCATTGTTTGGACTGCATGTCGTGGTCATCCTCCTGTATCCTCAAAAGCAAAGCTTGTTCTAACCAAGAGAGGTGAGCTTCTTCTTCAAACAGGTCCAGGGCAAAAGAAGGTTATTTCTCACGGTAACAACGGAACTGTTTCCTCTGCTTCCATGCTTGATTCTAGAAATTTTGTTCTGCAAAACAAAAATTCCGACATCCTTTGGCAGACTTTCGATCACCCAACTGATACTATATTAGGGGGTCAAATTCTAACTAGTGGGAGTGAATTGGTGTCTAGTTCATCAGACACCAACCAATCTTCTGGACGGTTTCAATTAGCGATGCAGAGTGATGGAAACCTTGTTCTGTATCCACGATATTCTGGTAGCACAGCTTGGGATGCTTACTGGGCCTCGGACACTGCAGATGGCCCTAGTTATCTTTTCCTCAACAACACAGATCCTCAGCCTCTATGTATTGTAAATGCCAATAGTTCCAACTCAGAAATACTTTGGCAAAAGGGTGATAGCAGCTTCAAAGGAAACAACACTATTTATCATGCAACTATTGATTCTGATAGAGTTTTTCGACTCTATGCTCATTATGAAGATGTAAATCGGACACATCAAGTTAAAATGTTGTGGTCACCGCCAAAGTTGGACAATCCTTGTAAAGTGAAGACTTTTTGTGGATTCAACAGCTATTGTACCATCAATGACGATCAGCCTTATTGCATTTGTCTTCCCGGAACTGATTTTATAGATCCAAGACAAACAAATCTTGGATGCAAAAGGAACTTCTCAGAAGCTGAATGTAGAGGTGGAGAAGATAATGCAACCTTTTATTACATGTCTCCCATGAGTTCTATGAACATGGGTGATCTTCCTTATACAGAGGAAGACATTCCAGAGGAGGAATGCTCAGCTTCTTGTTTGCAAGATTGTTACTGTGGGGCTGCCTTTTATGATGATGATCGCTGCAAGAAACAAAAGCCTCCATTAAGATATGTTACAAGAGAATCACGAGATTTGTCCTCCTTCACAATATACTTCAAGGTGGGACTTCATAGCCTAGAAAGCAACAATGAAAACCAACCACCTCCCATCAAGACTACCAGTAAGAAAGCAATTAAGGTGATCATTCTCATTGTCTTGGGTTTTGCTGTTCTTTTGTGTTCAGCTGTCGCAATCTCCGGCCATTTAATTTTCAAGATTGGAGTTTTAAGTTACAAGAGGTTGTTGGAGATGGGAGATTTAAGTTTGAGTCAAGGGATTACTCTGAGGGTATTTTCATACAATGAGCCGAAGAAAGCAACAAATGGTTTCAAACAAGAGGTGGGTAAGGGTTCGTTTGGATCAGTTTATAAAGGAACTTTACTCAAGGGAAGAAGACTTATTGCAGTAAAAAGGCTACACAGATTAATTGAAGAAGGAGAGAGAGAATTTCAAGCTGAGATGCAAGCCATTGGGAGAACCCACCACAAAAACTTAGTTCGCTTGCTTGGATATTGTGCTGAGGGATCCAAAAGGCTTCTAGTTTATGAGTTCATGAGTAATGGCTCCCTTGAGAAGTTTATCTTTGGTGACGGTACTGTTCGTCCTGATTGGGATCAGAGAAGAAGAATAGCACTAGACATTACAAGAGGCTTACTGTATCTCCATGAACAATGCTGGGCTCCCATTATTCACTGTGACAAAAAGGCTTCAAACATATTGATGGATGAGTTTTTTACAGCAAAAATGTCAGATTTTGGCTTGGCAAAACTTCTAATGCCAGATCAAACAAGAACCTTCACTCATGTTAGGGGGACACGAGGTTACTTGGCTCCAGAATGGAACAAAAACACTCCAATAACGGTGAAAGCAGATGTTTATAGTTACGGAGTTATGTTATTGGAGATTGTATTTTGTAGAAGAAGCTTAGTGGTTAACATTTCAAATCCAGAGCAAATTGTTTTGTCTAATTGGGTGTACAAGTGTTTTGTTCGGCGAGAGTTAAACAAGCTTGTTCTTGGGGATGACGTGGACCTAACAATGCTAGAGAATATGGTGAAAGTGGGGATATGGTGTATTCAAGATGAGCCTTTTCTTCGTCCATCAATGAAGAGTGTAGTTTTGATGCTTGAAGGAGTTACTGAGGTGGCTATCCCTCCTTGTCCATCTCCTAATTCTACATGA 2376 0.4061 MATVASSNIYSLFLVYFLCETVFTQHIPLGSSLSPIVPPISRLSPSRRFAFGFYEQGDGFKVGIWLFNENNKTIVWTACRGHPPVSSKAKLVLTKRGELLLQTGPGQKKVISHGNNGTVSSASMLDSRNFVLQNKNSDILWQTFDHPTDTILGGQILTSGSELVSSSSDTNQSSGRFQLAMQSDGNLVLYPRYSGSTAWDAYWASDTADGPSYLFLNNTDPQPLCIVNANSSNSEILWQKGDSSFKGNNTIYHATIDSDRVFRLYAHYEDVNRTHQVKMLWSPPKLDNPCKVKTFCGFNSYCTINDDQPYCICLPGTDFIDPRQTNLGCKRNFSEAECRGGEDNATFYYMSPMSSMNMGDLPYTEEDIPEEECSASCLQDCYCGAAFYDDDRCKKQKPPLRYVTRESRDLSSFTIYFKVGLHSLESNNENQPPPIKTTSKKAIKVIILIVLGFAVLLCSAVAISGHLIFKIGVLSYKRLLEMGDLSLSQGITLRVFSYNEPKKATNGFKQEVGKGSFGSVYKGTLLKGRRLIAVKRLHRLIEEGEREFQAEMQAIGRTHHKNLVRLLGYCAEGSKRLLVYEFMSNGSLEKFIFGDGTVRPDWDQRRRIALDITRGLLYLHEQCWAPIIHCDKKASNILMDEFFTAKMSDFGLAKLLMPDQTRTFTHVRGTRGYLAPEWNKNTPITVKADVYSYGVMLLEIVFCRRSLVVNISNPEQIVLSNWVYKCFVRRELNKLVLGDDVDLTMLENMVKVGIWCIQDEPFLRPSMKSVVLMLEGVTEVAIPPCPSPNST 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1641 791 Gene3D Phosphorylase Kinase; domain 1 492 582 - -
Acco04g1641 791 ProSiteProfiles Bulb-type lectin domain profile. 27 145 IPR001480 -
Acco04g1641 791 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 583 782 - -
Acco04g1641 791 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 199 IPR036426 -
Acco04g1641 791 Gene3D - 34 145 IPR036426 -
Acco04g1641 791 Gene3D Transferase(Phosphotransferase) domain 1 583 781 - -
Acco04g1641 791 FunFam Serine/threonine-protein kinase 147 277 - -
Acco04g1641 791 CDD STKc_IRAK 512 776 - -
Acco04g1641 791 ProSitePatterns Protein kinases ATP-binding region signature. 512 535 IPR017441 GO:0005524
Acco04g1641 791 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 34 787 - -
Acco04g1641 791 ProSiteProfiles Bulb-type lectin domain profile. 148 277 IPR001480 -
Acco04g1641 791 Gene3D - 148 295 - -
Acco04g1641 791 PIRSF SRK 1 791 IPR024171 GO:0004674
Acco04g1641 791 Pfam Protein kinase domain 509 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g1641 791 SUPERFAMILY alpha-D-mannose-specific plant lectins 169 266 IPR036426 -
Acco04g1641 791 SUPERFAMILY Protein kinase-like (PK-like) 490 775 IPR011009 -
Acco04g1641 791 SMART blect_4 33 147 IPR001480 -
Acco04g1641 791 Pfam D-mannose binding lectin 73 157 IPR001480 -
Acco04g1641 791 FunFam S-receptor-like serine/threonine-protein kinase 478 582 - -
Acco04g1641 791 ProSiteProfiles Protein kinase domain profile. 506 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1641 Acco-ChrAcco04 21133010 21135385 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1641 478 791 Receptor kinase-like Gene Family AT5G38280 41.411 1.02e-64 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Acco04g1641 Pkinase 1.7e-44 CL0016