Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1636 ATGGCTACCATTGCATCAAGCATATACTTTCTCTTTTTGGTATATTTTCTATGCGAAAGAGTATTCACACACGACATACAACTTAACTCTTCCCTTTCCCCCACTGGTCCTACCACTTCATGGCCTTCACCTTCAGGTCGATTTGCATTTGGCTTTTACAAGCAAGGCAATGGCTTCAAAGTTGGAATTTGGCTATTTGATGGGGACAGTAGTAAAATCGTCTGGACAGCATATCGTGATGATCCTCCTGTATCCTCAGATGCAGAGATTGTTCTAACCAGAAATGGTGTGCTACTTCTGCAAACAGGTCTAGCGCAAAAGAAGGTTATCGCTCCTAGTAACAAAGGAACTGTTTTCTCTGCTTCCATGCTTGATACTGGAAACTTTGTTCTGCAAAACAGAGTCTCCGACTTCCTTTGGCAGAGTTTTGATTACCCAACCGATACTATTTTAGGGGGTCAAATTCTACCTTCTGGGAGTCAATTAGTGTCTAGCACATCAGACACCAACCAATCTTCTGGAAGGTTTCTGCTCGCGATGCAGTCTGATGGAAACCTTGTTCTGTATCCACGAAATTCTGATGAGCACACAAGTTGGGATGCTTACTGGGCCTCGAACACTGCATATGGCACTAGTTTCAAATATTATCTTTTCCTCAACAACACAGATCCTCAGCCTCTATGTATTGTAAATGCCAGTAGTTCCAACTCACAAAAACTTTGGCAAGTGGATGCTAGCAGCTTCGAAGGAACAAACACTACTTATCGTGCAACTATTTATTCTGATGGAGTTTTACGACTCTACGCAAGTGGGGGGAACAACGAACTCGTTAGGTTGTGGTCATCATCTTCAAGTCGGGACAATCTTTGTAACGTGAAGAGTTTTTGTGGGTTCAACAGCTATTGCACCATCGTGGGCTACCAGCCTTACTGCAATTGTATTCCTGGAACTGAGTTTATAGATCCGAGTCAAACAAATCTTGGATGCAAAAGGAACTTCTCGGAAGCTGAATGTAAAGGAGGGAGAGATAACGCAACTTTTTATTTCATGTACAACATGAGTAGTATGCTCATGGGTGATCCTTCTTATACAGTGGAAGACATTGGGGAGGAGGAATGCCCATCTTCTTGTTTGCAAGATTGTTACTGTGGGGCTGCCTTTTATGAAAATAATCGCTGTAACAAACAAAAGCTTCCATTACGATATGTTGGAAAAGAAACACCAGCGTCATCTAAGACAATATTCTTCAAGGTTTCTAGTTTGACAGATGCTGAATTGAAGCCGCTCATACCTTCAATTGATCAAGCCCCATCCTTTCCGAAACCCATCAAGACTACAAGCAAGAAAGCAATTACGGTGATCATTCTCATTGTGTTAGGTTTTGCTATTCTTTTGTGTTCATCTGTTGCAATCTCTAGCCGATTTATATACAAGATTGGGGCTTTAAACTACAAGATGGAAGATTTAGGCTTGAGTGAAGGGGTTACTCTGAGGGCGTTTTCATACAATGAGCTGAAGAAAGCAACGAATGGTTTCAAACAAGAGCTGGGTAAGGGTTCCTTTGGATCGGTTTACAAAGGAACTTTACTCAAAGGAAGAAAATTGATTGCCGTGAAAAGGCTACACAGAATAATCGAAGAAGATAGAGACTTTGAAGCAGAAATGCGAGCCATTGGTAAAACCCACCACAAAAACTTGGTTCGCTTGCTGGGATATTGTGCTGAGGGATCTAAAAGGCTTCTGGTTTATGAGTTCATGAGTAATGGCTCCCTTGACAAGTTTATCTTTGGAGACAGTTCTCTGCATCCAAATTGGGAACAGAGAAGAACGATAGCACTTGACATTGCAAGAGGGTTACTGTATCTCCATGAACAATTGAGAGCTCCCATCATTCACTGTGACATAAAGCCTGATAACATATTGATGGATGAGTTTTGGACAGCTAAAATATCAGATTTTGGCTTAGCAAAACAATTAATGCCAGATCAAACAAGAACCTTCACAAAAGGTAGAGGGACAAGAGGTTATACAGCTCCAGAGTGGAACAAGGACAACACTCCAATAACAGTGAAAGCAGATGTTTATAGCTATGGAAAAATGCTTTTGGAGATTGCATTTTGCAGAAGAAGCTTATTGGTTAACATATTGAATCCAGAGCAAACTGTTTTGTCTAATTGGGTGTACAAGTGTTTTGTTGGGCGAGAGCTAAGCAAGCTTGTTGTTGGGGAAGAAGTGGATAACACATTGCTGGAGAATATGGTCAAAGTAGGATTATGGTGTATTCAAGATGAACCTTTTCTTCGGCCATCAATGAAGAGTGTTGTGTTGATGCTTGAAGGAGTTACTGAGGTGGCTATTCCTCCTCCCCCATCTCCTGATTATACTTGA 2388 0.4137 MATIASSIYFLFLVYFLCERVFTHDIQLNSSLSPTGPTTSWPSPSGRFAFGFYKQGNGFKVGIWLFDGDSSKIVWTAYRDDPPVSSDAEIVLTRNGVLLLQTGLAQKKVIAPSNKGTVFSASMLDTGNFVLQNRVSDFLWQSFDYPTDTILGGQILPSGSQLVSSTSDTNQSSGRFLLAMQSDGNLVLYPRNSDEHTSWDAYWASNTAYGTSFKYYLFLNNTDPQPLCIVNASSSNSQKLWQVDASSFEGTNTTYRATIYSDGVLRLYASGGNNELVRLWSSSSSRDNLCNVKSFCGFNSYCTIVGYQPYCNCIPGTEFIDPSQTNLGCKRNFSEAECKGGRDNATFYFMYNMSSMLMGDPSYTVEDIGEEECPSSCLQDCYCGAAFYENNRCNKQKLPLRYVGKETPASSKTIFFKVSSLTDAELKPLIPSIDQAPSFPKPIKTTSKKAITVIILIVLGFAILLCSSVAISSRFIYKIGALNYKMEDLGLSEGVTLRAFSYNELKKATNGFKQELGKGSFGSVYKGTLLKGRKLIAVKRLHRIIEEDRDFEAEMRAIGKTHHKNLVRLLGYCAEGSKRLLVYEFMSNGSLDKFIFGDSSLHPNWEQRRTIALDIARGLLYLHEQLRAPIIHCDIKPDNILMDEFWTAKISDFGLAKQLMPDQTRTFTKGRGTRGYTAPEWNKDNTPITVKADVYSYGKMLLEIAFCRRSLLVNILNPEQTVLSNWVYKCFVGRELSKLVVGEEVDNTLLENMVKVGLWCIQDEPFLRPSMKSVVLMLEGVTEVAIPPPPSPDYT 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1636 795 Gene3D - 21 145 IPR036426 -
Acco04g1636 795 PIRSF SRK 1 795 IPR024171 GO:0004674
Acco04g1636 795 ProSiteProfiles PAN/Apple domain profile. 338 420 IPR003609 -
Acco04g1636 795 ProSiteProfiles Bulb-type lectin domain profile. 147 280 IPR001480 -
Acco04g1636 795 ProSitePatterns Protein kinases ATP-binding region signature. 516 539 IPR017441 GO:0005524
Acco04g1636 795 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 208 IPR036426 -
Acco04g1636 795 FunFam Putative receptor-like protein kinase 586 786 - -
Acco04g1636 795 ProSiteProfiles Bulb-type lectin domain profile. 23 144 IPR001480 -
Acco04g1636 795 Pfam Protein kinase domain 513 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g1636 795 ProSitePatterns Serine/Threonine protein kinases active-site signature. 630 642 IPR008271 GO:0004672|GO:0006468
Acco04g1636 795 Gene3D Phosphorylase Kinase; domain 1 482 585 - -
Acco04g1636 795 Pfam D-mannose binding lectin 73 154 IPR001480 -
Acco04g1636 795 Gene3D - 147 286 IPR036426 -
Acco04g1636 795 FunFam S-receptor-like serine/threonine-protein kinase 483 585 - -
Acco04g1636 795 SUPERFAMILY Protein kinase-like (PK-like) 496 779 IPR011009 -
Acco04g1636 795 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 32 791 - -
Acco04g1636 795 SMART serkin_6 510 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g1636 795 SMART blect_4 23 146 IPR001480 -
Acco04g1636 795 SMART blect_4 153 286 IPR001480 -
Acco04g1636 795 Gene3D Transferase(Phosphotransferase) domain 1 586 785 - -
Acco04g1636 795 ProSiteProfiles Protein kinase domain profile. 510 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1636 Acco-ChrAcco04 20890405 20897245 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1636 385 792 Receptor kinase-like Gene Family AT1G66980 35.862 1.40e-64 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Acco04g1636 Pkinase 6.2e-44 CL0016