Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1596 ATGGATGGCAACAAAGACGATGCGTTGAAGTGCTTGAAAATTGGGAGAGAGGCATTAGAAAGCGGGGATCGGGCTCGTGCTTTGAAATTTGTTACCAAAGCCCGCCGTCTTGACCCGATTTTGCCCGTTGATGATCTATTGGCAGCGATAGAGAAAGATACAAGGGGCCAACAGCCGACGGCGGCTGCCAATGGGCCATCAGTGACGTCTTCGTCGAAGGCCTCTGATCAACCTTCTCTTCGTCAAAGGGTTTCGACAGCAGGGTCTTCATCCTCTACATCATCAGCTTCATATACGGAGGAGCAAATTACGATTGTTAGAGAGATTAGGAGGAAGAAGAATTTTTATGAAATTTTGGGGTTAGAGAAGAGTTGCACGGTTGATGATGTGCGAAAAGCATACAGAAAATTGTCTTTGAAGGTTCATCCTGATAAGAACAAAGCTCCTGGTGCTGAGGAGGCGTTTAAGGCTGTATCTAAAGCTTTCCAGTGTCTAAGTAACGAAGAGAGTCGAAAGAAGTATGAACTTGTTGGAGAGGATGAAGATGTTTACGAAAGACGTGCTGCAATGCGGGCAACACGGGCATATAATGGGTATTATGAAGCTGATATTGATGCAGAGGAAATATTTAGGAATTTCTTCTTTGGCGGAATGGCTCCTGCAACATCTTTTGGTGGCTTTAGTTTTGGACCGGGGATGGCTCCCAGACCGGCTGAACATGGGTCTAGTGGCTTTAATGTTCGGGCTTTGATTCAGTTGCTTCCTGTTCTGCTTATTCTGCTTTTGAACTTCTTGCCATCTTCAGATCCTATCTATTCACTTTCTCAGCAGTATCCATATGAGTATCGGTTTACTACACCAAAGGGTGTCAACTATTATGTTAAGTCGGCCAAATTTGGTGAAGACTACCCACCAAATAGCCATGAGCGAACAAGACTTGAAGATAGGGTTGAAAGTGATTACCTCAATATTCTTAGAGAGAATTGTCGGCTTGAGTGGCATCGCCGCCAATGGGGATACATTCGGGAAATGCCACATTGTGAAATGCTTCGCAAGTTTGAACCAGTGAACTGA 1074 0.4488 MDGNKDDALKCLKIGREALESGDRARALKFVTKARRLDPILPVDDLLAAIEKDTRGQQPTAAANGPSVTSSSKASDQPSLRQRVSTAGSSSSTSSASYTEEQITIVREIRRKKNFYEILGLEKSCTVDDVRKAYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNEESRKKYELVGEDEDVYERRAAMRATRAYNGYYEADIDAEEIFRNFFFGGMAPATSFGGFSFGPGMAPRPAEHGSSGFNVRALIQLLPVLLILLLNFLPSSDPIYSLSQQYPYEYRFTTPKGVNYYVKSAKFGEDYPPNSHERTRLEDRVESDYLNILRENCRLEWHRRQWGYIREMPHCEMLRKFEPVN 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1596 357 Pfam DnaJ domain 114 175 IPR001623 -
Acco04g1596 357 MobiDBLite consensus disorder prediction 57 97 - -
Acco04g1596 357 ProSitePatterns Nt-dnaJ domain signature. 155 174 IPR018253 -
Acco04g1596 357 SMART dnaj_3 113 170 IPR001623 -
Acco04g1596 357 FunFam Chaperone protein dnaJ 49 110 225 - -
Acco04g1596 357 Pfam Domain of unknown function (DUF1977) 266 337 IPR015399 -
Acco04g1596 357 MobiDBLite consensus disorder prediction 54 97 - -
Acco04g1596 357 ProSiteProfiles dnaJ domain profile. 114 178 IPR001623 -
Acco04g1596 357 SUPERFAMILY Chaperone J-domain 85 174 IPR036869 -
Acco04g1596 357 CDD DnaJ 114 167 IPR001623 -
Acco04g1596 357 PRINTS DnaJ domain signature 150 170 IPR001623 -
Acco04g1596 357 PRINTS DnaJ domain signature 116 134 IPR001623 -
Acco04g1596 357 PRINTS DnaJ domain signature 134 149 IPR001623 -
Acco04g1596 357 PANTHER AT29763P-RELATED 1 352 - -
Acco04g1596 357 Gene3D DnaJ domain 110 223 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1596 Acco-ChrAcco04 19807047 19808120 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1596 109 175 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 36.620 1.10e-08 54.3