Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1560 ATGGAATTGATCAATGACATTGCCAAAGCTCATGGGGGTGTATCTATATTTGGGGGAGTAGATGAACGTATTAGTGAGGGAAATGATCTTTACATGGAAATGAAAGAATCTGGAGTAATTAATGAACAAAATATTGCAGAATCAAAAGTGGCTCTAGTCTACGATCAAATGAATGAACCACCTGGAGCTCGTATAAGAGTTGGTTTAATTGCCCTAACTATGGCGGAATATTTCCGAGATGTCAATGAACAAGACGTACTTCTTTTTATCTACAATATCTTCCGATTCGTCCAAGCGAGATCTGAAGTATTCGCCTTATTGGACGATTTGACCAATCCTGCTCCTGCCGCGACATTTGCCTATTTAGATGCTACTACCGTACTATCAAGAGGATTGGCTGCCAAAGGTATCTATCCAGTAGTAGATCCTTTAGATTCAACGTCAACTATGCTACAACCTCGGATCGTTGGCGAAGAACACTATGAAATTGCGCAAAGAGTTAAACAAACTTTACAATGTTACAAAGAACTTCAGGACATTACAGCTATCCTTGGGTTAGACAAATTATCCAAAGAGGATCGCTTAACCATAGCAATAGCATGA 603 0.3947 MELINDIAKAHGGVSIFGGVDERISEGNDLYMEMKESGVINEQNIAESKVALVYDQMNEPPGARIRVGLIALTMAEYFRDVNEQDVLLFIYNIFRFVQARSEVFALLDDLTNPAPAATFAYLDATTVLSRGLAAKGIYPVVDPLDSTSTMLQPRIVGEEHYEIAQRVKQTLQCYKELQDITAILGLDKLSKEDRLTIAIA 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1560 200 PANTHER ATP SYNTHASE 1 107 - -
Acco04g1560 200 Gene3D - 153 200 IPR024034 -
Acco04g1560 200 Gene3D - 1 107 IPR027417 -
Acco04g1560 200 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 5 106 IPR000194 GO:0005524
Acco04g1560 200 SUPERFAMILY C-terminal domain of alpha and beta subunits of F1 ATP synthase 151 200 - -
Acco04g1560 200 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 152 IPR027417 -
Acco04g1560 200 Gene3D - 108 152 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1560 Acco-ChrAcco04 18834996 18835723 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1560 42 195 Primary Pumps ATPases(2) AT1G76030 22.772 2.08e-06 45.4