Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1513 ATGACAAAGAACGGCTTGTGGTGGGGTGTACTTAAAAATTCACAAGGGTGTGTTTTGGAAGGAATCCTCCCAAATTTGGAATCGGGAGACTTCTTAACTGCTGAAATCTGTGGCTGTCAAATTGTTCTCAAAAGAGCTTGGGATGGTGGTTTTGAGAATATTTTGGTTAGGAGTGATTCAATGGGGGCCTTCCACTTGATACATAATGACATACCAGACATGCATGAAGACCAAAATCTTATCATGGAGGCAATTTTCGGGCTCGTAGTCCTCTCATTATTGACTCCATGCTGGTACGTTATCCTCAGAAACATTGAGCAGCAAGTGAATTCAAACTCAAAAAACAATACAGTTTCAGAGTTACAATCACAAGTTTCCCACTCTGCCAAACTATTACACCCCTTCACTTCATCTTCAACCAATTTAGCTCGCTTTCTGGGTTCCACCTTCAACAATACCCCTAACAAGGTCTCCTTCTTCGACATTGAGACCAAAGCTGCTCCAGTTTTGTTTCATGCTTTTCAGATTATTCCTCACCTGGTTGAGATCTCATACATTGATACAGAAGGCCTCTTCTTCTCATACTATATCGATCATGATCGAACTCTTGCATTATACTCTAACTCCTCGTTTTCTTCTCCCTTGAGTGCTTCAAAAATGATTTACTATGTTCAACCTGTAAACCCTAGCACTGGAGGATTATATGGTAAATCCAGAATATATGAGCATCCTATTAACACAAGTTGGATTCAGGAAGCTGTGAATAGTTCTCATGGATATTCCACTTTAGGACCCATGTGGAGCAATGATCGTCAAATTTTATATGTTAGTTTAGAGAGAGTATCAAGAACAAGGTTGATCTCATTAGGGTTTGTAGCAACTTCAATTATTGATTTTGTCACCCCTATTATTGGGAGTCAAGGTGAAAGCTTGTTACTTCATTTGGCTTCCAAACAAGGGAAAGTGATTTTCCAAGGATTCAAAAGTGTCCATACAGATATAGTATTCTCTAACGATACAGCTTCCTTCTATTTAGTGAAGTCAAATGGTGACCAAATGAGTTATCTAGGCTCTGTTTCATGCAAGGATGATGAAGCCTCTGCTTCAGTTTTAAAAATTGGGGCTGCTCGGTTTTTGACACAATGCTTATCAATTGATATAATGGGAGTAGAATCGGTTTATGTCATAGCTATACCGCGAAATGGATTGGTGGCCTTTGTACATAAGAGTGTAAAACTTGGGTTAGTGCTAATGAGTTGTATGATGGTTGCTATATTGATCTCCATCTCTAGTTTTGTATTGTTAAATGCCATAGTGGGTTGGAGAGAGATGCATTTGTGTGCCTCTTTAATCAAACAAATGGAAGCCACTCAACAAGCTGAGAGGAAGAGTATGAATAAGAGTGTTGCATTTTCCAGTGCGAGCCACGATATTCGTGCTTCTCTTGCCGGTCTTATTGGTTTGGTAGAGATGTCTTGTGAAGAAGTTGTCCCTGATTCAGAACTAGAGACCAATTTAAAGCAAATGGCTGCTTGTATAGAAGACTTACAAGGGTTATTGAATTCTATTCTTGATACAAGTAAAATTGAGGCGGGGAAAGTGCAACTTGAGGAACAAGAATTTGATCTATCCCAGTTCATAGAAGATAAAGTTGACTTGTTCCATGCTGCAGCAATGAAGAAAGGTGTTGATCTTGTATTGGACCACTGTGATGGTTCTGTTATCAGCTATTCACGTGTAAAAGGCGACAAAGGAAAGCTTCATCAAGTTTTATGTAATTTACTGAGTAACGCTGTTAAGTTTACTGATAAAGGACACATAGTAGTTCGAGCTTGGGCTCAAAAGCCAAGTTTCCAGAACTCAGTAATTTCTACTCACAGATGCAGTTTCATGAAACTCTTGTCAAGCTTGTTTCGCAAGAAAAATCAAGCAGATGTTGATGTAGAAGCCATGAATAGTACAATCCTACAAGACCCAAACTACTTGGACTTTGTGTTTGAAGTGGATGACACTGGAAAAGGAATTCCTAAGGAGAAGCAAGCGTCTGTGTTTGAGAATTATGTTCAAGTCAAAGAAGCTGGTTTAGGACTAGAAGGCACTGGCTTGGGACTTGGTATTGTGCAATCACTGGTACATTTGATGCATGGGAATATTGGAATTGTGGACAAGGAAATTGGTGAGAAAGGAACTTGCTTTAGATTCAATGTCCTCCTTGCCATAAGCGAGACATTAACCGGTAACATTAGCACAAGGGAAGTTAATGATTCAAATCAACCTCAGAGACAAGATATGAACACTCCTAGTTCTGGTTCAAGCATCTGTTCCCTCAGCCCAAGATTACCTTTTTTTTCTTCTAATAATAGGTTCAGAGATTCTCATGTTGTTCTTCTGATTCAAAATGAGGGGCGTCGAAGGATTACCAAAAGGTTCATGGAGAGATTGGGGATTAAAGTTAAGGTTGTGAAGAAGTGGGAACATTTGTCTCAAACTCTCAAGAAGATCAAGCAAAAGGAGTGCAATTCCAGCCATAGCTCTACGGGAACATCATCACATATGAGTTCTGATCAGTCTACACCTCACAATTCTAATATTGCTAGAGCCAAAAAATTTCCTTTGAGTGCAGCAGATGGAGCAGACTATATCACTTCGGTTTTAAACAAGTTAGAAGATGGAGCTTCCGTGGGTTTAGTTCTGCTTGTTATTGATTCATTAGCAGCACCCTTATCAGAACTTGGCATGATGATATCTGAGTTCAGAAGAGGCCTTAGAAACCCTTGCAAGGTTGTTTGGTTAAATAAGCCACTCGTGCACAATGTTGATTTTAAAGCACTCGATGATGAAGATGTGATCGACCCAAATGACATTGTCCTGTCCAAACCATTACACGGTATTCGTTTGTTCAACATTATCAGGCTTCTTCCTGAGTTTGGTGGCAGTTCTACATGCATGTCTGGAATTGGAAGAGCAAGTAGAGACAGCAGTTTTCACAATACTATGAGAAAAACATTAAAAAAATCCAATGTACCAAGATATCAATCACCTGTTTTGGACAGAACAGAAGTTCCCTCACTTAATCCAGCCCCATTTCAAGATGTTGAACTACAAGCAGCTTGTCATAATTCATGGAGGACAGAACAATTGCAATATTCTTCTTATGGTGGGTCTAAGGCAAGGAATTCTCAAGTTGATCATGGAGAGATACAAGAATGTAGTACTTCAAGCAGTGACAAGCCCTTAAATGGCAAAAGATTTTTGGTTGTCGACGACACTGGATATCTACGTATGATAGCTTTGAAGAGTTTGAAGCAGTTAGGCGCGACGAGTATGGAATGTAACAACGGCGAAGATGCAGTAAACCAAGTTGAAAAGAGTCTATCTGAGGCTTTCCCTGATCCTCCTTATGATTATATCTTAATGGATTGTGAGATGCCAGTAATGGACGGGTTCGAGGCGACAAAGCATATAAGGAAGATGGAGAAGTGTTATGGGGTTTACATACCTATCATGGCATTAACAGCTCATACGTCTGAGAAGGAAGCAAATAAGATCAAAGAGGCAGGAATGGATGCTCATTTAAGTAAGCCACTGAAGAAAGAGCATTTATTGGACGCCATCAGATTCATAGACAGTAAACTGTGTAACATGTGA 3648 0.3972 MTKNGLWWGVLKNSQGCVLEGILPNLESGDFLTAEICGCQIVLKRAWDGGFENILVRSDSMGAFHLIHNDIPDMHEDQNLIMEAIFGLVVLSLLTPCWYVILRNIEQQVNSNSKNNTVSELQSQVSHSAKLLHPFTSSSTNLARFLGSTFNNTPNKVSFFDIETKAAPVLFHAFQIIPHLVEISYIDTEGLFFSYYIDHDRTLALYSNSSFSSPLSASKMIYYVQPVNPSTGGLYGKSRIYEHPINTSWIQEAVNSSHGYSTLGPMWSNDRQILYVSLERVSRTRLISLGFVATSIIDFVTPIIGSQGESLLLHLASKQGKVIFQGFKSVHTDIVFSNDTASFYLVKSNGDQMSYLGSVSCKDDEASASVLKIGAARFLTQCLSIDIMGVESVYVIAIPRNGLVAFVHKSVKLGLVLMSCMMVAILISISSFVLLNAIVGWREMHLCASLIKQMEATQQAERKSMNKSVAFSSASHDIRASLAGLIGLVEMSCEEVVPDSELETNLKQMAACIEDLQGLLNSILDTSKIEAGKVQLEEQEFDLSQFIEDKVDLFHAAAMKKGVDLVLDHCDGSVISYSRVKGDKGKLHQVLCNLLSNAVKFTDKGHIVVRAWAQKPSFQNSVISTHRCSFMKLLSSLFRKKNQADVDVEAMNSTILQDPNYLDFVFEVDDTGKGIPKEKQASVFENYVQVKEAGLGLEGTGLGLGIVQSLVHLMHGNIGIVDKEIGEKGTCFRFNVLLAISETLTGNISTREVNDSNQPQRQDMNTPSSGSSICSLSPRLPFFSSNNRFRDSHVVLLIQNEGRRRITKRFMERLGIKVKVVKKWEHLSQTLKKIKQKECNSSHSSTGTSSHMSSDQSTPHNSNIARAKKFPLSAADGADYITSVLNKLEDGASVGLVLLVIDSLAAPLSELGMMISEFRRGLRNPCKVVWLNKPLVHNVDFKALDDEDVIDPNDIVLSKPLHGIRLFNIIRLLPEFGGSSTCMSGIGRASRDSSFHNTMRKTLKKSNVPRYQSPVLDRTEVPSLNPAPFQDVELQAACHNSWRTEQLQYSSYGGSKARNSQVDHGEIQECSTSSSDKPLNGKRFLVVDDTGYLRMIALKSLKQLGATSMECNNGEDAVNQVEKSLSEAFPDPPYDYILMDCEMPVMDGFEATKHIRKMEKCYGVYIPIMALTAHTSEKEANKIKEAGMDAHLSKPLKKEHLLDAIRFIDSKLCNM 1215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1513 1215 SMART HisKA_10 466 532 IPR003661 GO:0000155|GO:0007165
Acco04g1513 1215 ProSiteProfiles Response regulatory domain profile. 1083 1209 IPR001789 GO:0000160
Acco04g1513 1215 PANTHER TWO-COMPONENT HISTIDINE KINASE 110 1205 - -
Acco04g1513 1215 CDD RNase_H_like 9 84 IPR044730 -
Acco04g1513 1215 Gene3D - 533 744 IPR036890 -
Acco04g1513 1215 Gene3D - 453 532 - -
Acco04g1513 1215 Gene3D - 1060 1210 - -
Acco04g1513 1215 Pfam Response regulator receiver domain 1085 1206 IPR001789 GO:0000160
Acco04g1513 1215 CDD REC_hyHK_CKI1_RcsC-like 1084 1205 - -
Acco04g1513 1215 MobiDBLite consensus disorder prediction 835 862 - -
Acco04g1513 1215 SMART HKATPase_4 582 740 IPR003594 -
Acco04g1513 1215 Pfam His Kinase A (phospho-acceptor) domain 471 532 IPR003661 GO:0000155|GO:0007165
Acco04g1513 1215 MobiDBLite consensus disorder prediction 840 862 - -
Acco04g1513 1215 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 521 735 IPR036890 -
Acco04g1513 1215 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 582 738 IPR003594 -
Acco04g1513 1215 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 454 533 IPR036097 GO:0000155|GO:0007165
Acco04g1513 1215 PRINTS Bacterial sensor protein C-terminal signature 664 678 IPR004358 GO:0016310|GO:0016772
Acco04g1513 1215 PRINTS Bacterial sensor protein C-terminal signature 682 692 IPR004358 GO:0016310|GO:0016772
Acco04g1513 1215 PRINTS Bacterial sensor protein C-terminal signature 698 716 IPR004358 GO:0016310|GO:0016772
Acco04g1513 1215 SMART REC_2 1082 1205 IPR001789 GO:0000160
Acco04g1513 1215 SUPERFAMILY CheY-like 1078 1206 IPR011006 -
Acco04g1513 1215 ProSiteProfiles Histidine kinase domain profile. 473 740 IPR005467 -
Acco04g1513 1215 MobiDBLite consensus disorder prediction 750 773 - -
Acco04g1513 1215 CDD HisKA 471 528 IPR003661 GO:0000155|GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1513 Acco-ChrAcco04 17833396 17838518 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1513 98 1211 Histidine Kinase Gene Family AT2G47430 37.760 0.0 640
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Acco04g1513 HATPase_c 3.2e-22 CL0025