Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1508 ATGTTAGCTTCTTGCCGGCAGTACCCACAGTTTTCCACCTTCTTCCTTCGTTCGCAGCAGGCAGTCTCTCGGAGTCACACAGCCGCCGCCATGGGTAGGGTTCGTACGAAAACGGTGAAGAAGTCGTCTCGACAAGTCATCGAGAAGTACTATTCTCGGATGACCTTAGATTTCCACACTAACAAGAAGATTCTTGAGGAGGTTGCTCTCATCCCTTCCAAGAGGCTCCGTAACAAGATCGCCGGATTCTCTACGCATCTGATGAAGAGGATCCAGAAGGGCCCTGTTCGCGGCATTTCCCTCAAGCTTCAGGAGGAGGAGCGCGAGCGTCGTATGGATTTCGTTCCTGATGTTTCCGCCATTAAGACTGATCAAATTGAAGTTGACAAGGAGACGCTTGACATGCTTAATGCTCTTGGCATGAGTGATATTCCCGGTGTTGTCCAGGTCGATCCTACGCCTGTGCCGCAGGTCGGATTTGGTCGTGGTTTCGGTGGCGGTGCTAGGAGGTACTGA 516 0.5194 MLASCRQYPQFSTFFLRSQQAVSRSHTAAAMGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVALIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDKETLDMLNALGMSDIPGVVQVDPTPVPQVGFGRGFGGGARRY 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1508 171 Hamap 30S ribosomal protein S17e [rps17e]. 31 93 IPR001210 GO:0003735|GO:0005840|GO:0006412
Acco04g1508 171 PANTHER 40S RIBOSOMAL PROTEIN S17 31 154 IPR001210 GO:0003735|GO:0005840|GO:0006412
Acco04g1508 171 FunFam 40S ribosomal protein S17 31 92 - -
Acco04g1508 171 Gene3D - 31 92 IPR036401 GO:0003735|GO:0005840|GO:0006412
Acco04g1508 171 Pfam Ribosomal S17 31 150 IPR001210 GO:0003735|GO:0005840|GO:0006412
Acco04g1508 171 SUPERFAMILY Rps17e-like 31 92 IPR036401 GO:0003735|GO:0005840|GO:0006412
Acco04g1508 171 ProSitePatterns Ribosomal protein S17e signature. 71 86 IPR018273 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1508 Acco-ChrAcco04 17761328 17762974 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1508 31 171 Cytoplasmic Ribosomal Protein Gene Family AT2G04390 81.379 1.34e-79 231