Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1507 ATGGACGGGCACACGGACAGGTCGGAGAAGGGGAAGGAGGAGATCAGATACCGGGGAGTTCGGAAGCGGCCGTGGGGAAAGTATGCGGCGGAGATAAGGGATCCATCAAGGCAAGGGGCGAGGCAGTGGCTGGGGACGTTTGATACGGCGGAGGAAGCAGCAAGAGCTTATGACAAAGCTGCCTTTAACATGAGAGGTCATCTCGCAATCCTTAATTTCCCCTCCGAATACTATGCTCATGTACGAGGTTCCCCACCATACCCTCCCTACTTAGCTTCTTCTTCTTCTTCGTCGCCGCCGCTGGGTCGCGCAAGTGTAAGCTCGTCGGCGTCGGGACGGGGGCAAGTTTTTGAGATTGAGTGTTTGGATAATCAGGTTCTGGAAGACCTTCTTGAAACAGAAGACGGAAAGAAGAAAAGTGGTGGAGATTGA 432 0.537 MDGHTDRSEKGKEEIRYRGVRKRPWGKYAAEIRDPSRQGARQWLGTFDTAEEAARAYDKAAFNMRGHLAILNFPSEYYAHVRGSPPYPPYLASSSSSSPPLGRASVSSSASGRGQVFEIECLDNQVLEDLLETEDGKKKSGGD 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1507 143 CDD AP2 16 74 IPR001471 GO:0003700|GO:0006355
Acco04g1507 143 MobiDBLite consensus disorder prediction 88 112 - -
Acco04g1507 143 FunFam Ethylene-responsive transcription factor 2 16 76 - -
Acco04g1507 143 Gene3D AP2/ERF domain 15 76 IPR036955 GO:0003700|GO:0006355
Acco04g1507 143 PANTHER DNA-BINDING DOMAIN 9 125 IPR044808 GO:0003700|GO:0009873
Acco04g1507 143 SMART rav1_2 16 80 IPR001471 GO:0003700|GO:0006355
Acco04g1507 143 SUPERFAMILY DNA-binding domain 16 75 IPR016177 GO:0003677
Acco04g1507 143 PRINTS Ethylene responsive element binding protein signature 17 28 IPR001471 GO:0003700|GO:0006355
Acco04g1507 143 PRINTS Ethylene responsive element binding protein signature 40 56 IPR001471 GO:0003700|GO:0006355
Acco04g1507 143 MobiDBLite consensus disorder prediction 89 112 - -
Acco04g1507 143 ProSiteProfiles AP2/ERF domain profile. 16 74 IPR001471 GO:0003700|GO:0006355
Acco04g1507 143 Pfam AP2 domain 16 67 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1507 Acco-ChrAcco04 17747225 17747656 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1507 13 138 AP2-EREBP Transcription Factor Family AT3G23230 61.905 3.48e-47 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco04g1507 AP2 1.5e-15 CL0081