Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1505 ATGGATAAATCTGGCGGCGGGATGGCGGCCAATAAGGACGCGGAGGGTGGCGCTGTCCGGTACAGGGGAGTGAGGAGGCGGCCATGGGGGAAGTTCGCGGCGGAGATCCGGGACTCAACGAACCAAGGGCAGAGGGTGTGGCTGGGGACTTTTGACACGGCCGAGGAAGCGGCGAGAGCGTACGACAGAGCCGCTTACAACATGAGAGGCTCATTCGCAATCCTCAACTTCCCCAATGAATACCCTCTCACAGCTAATCGTTCAAACAACACTGCGTCTTCGTCGTCGTCGTCGTCGTCATCAGCTGCTTCTTCTTCGAGGAACCGCCCTGAAGTGTTCGAGTTCGAGTACCTGGATGATAAACTGCTGGAGGAGCTTCTGGACTATGATGAGAAGAAGAAGAACGGAAAGTGA 414 0.5628 MDKSGGGMAANKDAEGGAVRYRGVRRRPWGKFAAEIRDSTNQGQRVWLGTFDTAEEAARAYDRAAYNMRGSFAILNFPNEYPLTANRSNNTASSSSSSSSSAASSSRNRPEVFEFEYLDDKLLEELLDYDEKKKNGK 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1505 137 Gene3D AP2/ERF domain 19 79 IPR036955 GO:0003700|GO:0006355
Acco04g1505 137 ProSiteProfiles AP2/ERF domain profile. 20 78 IPR001471 GO:0003700|GO:0006355
Acco04g1505 137 MobiDBLite consensus disorder prediction 83 109 - -
Acco04g1505 137 PRINTS Ethylene responsive element binding protein signature 44 60 IPR001471 GO:0003700|GO:0006355
Acco04g1505 137 PRINTS Ethylene responsive element binding protein signature 21 32 IPR001471 GO:0003700|GO:0006355
Acco04g1505 137 SMART rav1_2 20 84 IPR001471 GO:0003700|GO:0006355
Acco04g1505 137 MobiDBLite consensus disorder prediction 83 108 - -
Acco04g1505 137 PANTHER DNA-BINDING DOMAIN 17 132 IPR044808 GO:0003700|GO:0009873
Acco04g1505 137 SUPERFAMILY DNA-binding domain 20 79 IPR016177 GO:0003677
Acco04g1505 137 CDD AP2 20 79 IPR001471 GO:0003700|GO:0006355
Acco04g1505 137 FunFam Ethylene-responsive transcription factor 2 20 79 - -
Acco04g1505 137 Pfam AP2 domain 20 70 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1505 Acco-ChrAcco04 17713445 17713858 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1505 20 134 AP2-EREBP Transcription Factor Family AT3G23230 66.942 6.93e-45 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco04g1505 AP2 3.3e-17 CL0081