Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1493 ATGGCGGAACAAACTGAGAAGGCTTTCCTGAAGCAGCCAAAAGTGTTTCTAAGCTCGAAGAAATCTGGGAAGGGGAATAGGCCTGGAAAAGGAGGGAACCGGTTTTGGAAGTCTATTGGTCTCGGATTCAAGACTCCCAGGGAAGCTATTGAAGGAACCTACATTGATAAGAAGTGTCCCTTCGCTGGCAATGTTTCTATCAGGGGTCGTATTATTGCTGGCACTTGTCACAGTGCTAAGATGACAAGAACCATAATTGTCAGAAGGAACTATCTCCATTTTGTCAAGAAGTACCAGAGGTATGAGAAGAGGCACTCAAACATTCCTGCTCACATATCTCCTTGCTTTCGCGTAAAAGAAGGAGATTATGTGATGATTGGTCAGTGCAGGCCACTCTCAAAGACAGTGAGGTTTAACGTGTTGAAAGTGATCCCGGCTGGATCTTCTAGTGGGAAGAAGGCATTTACTGGAATGTGA 477 0.4507 MAEQTEKAFLKQPKVFLSSKKSGKGNRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCPFAGNVSIRGRIIAGTCHSAKMTRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDYVMIGQCRPLSKTVRFNVLKVIPAGSSSGKKAFTGM 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1493 158 Gene3D - 1 157 - -
Acco04g1493 158 NCBIfam 30S ribosomal protein S17 54 143 IPR028333 -
Acco04g1493 158 PRINTS Ribosomal protein S17 family signature 88 111 IPR000266 GO:0003735|GO:0005840|GO:0006412
Acco04g1493 158 PRINTS Ribosomal protein S17 family signature 121 131 IPR000266 GO:0003735|GO:0005840|GO:0006412
Acco04g1493 158 PRINTS Ribosomal protein S17 family signature 131 138 IPR000266 GO:0003735|GO:0005840|GO:0006412
Acco04g1493 158 Pfam Ribosomal_S17 N-terminal 4 72 IPR032440 -
Acco04g1493 158 SUPERFAMILY Nucleic acid-binding proteins 68 147 IPR012340 -
Acco04g1493 158 FunFam 40S ribosomal protein S11 1 157 - -
Acco04g1493 158 ProSitePatterns Ribosomal protein S17 signature. 121 133 IPR019979 GO:0003735|GO:0005840|GO:0006412
Acco04g1493 158 PANTHER 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER 10 150 IPR000266 GO:0003735|GO:0005840|GO:0006412
Acco04g1493 158 Pfam Ribosomal protein S17 74 142 IPR000266 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1493 Acco-ChrAcco04 17453774 17455347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1493 1 158 Cytoplasmic Ribosomal Protein Gene Family AT5G23740 89.308 1.95e-96 273