Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1482 ATGGCGTTTGACCCAAATTCCGTTCCAAAAGATCTGCGACCGTTAAACGTAGCTCGAACTGATGAACCTCTCATTGTACCGGCGACTACCATGGCCCGTGAGATCGGTAGCCAAGGGAATATGTCCATATTTTACCCAGCACCGGTAGCTGATGCTGGGCATGTTGGTGTGGGGTATGGAACTATGTCATCGGGTCCTGCTTCCTGGTGCGTTCGTCCAGGTGTGTCCGTTGTGCATACGGCTCTGGATCCTACTGTTGGGTATGGCTGTAGTCCTAGTTATGGCAATCGGATTTCTGGTGGCAATGCTGTTGATCTTTCAAGTAGTGTTGTTGCAAATGGACCTGGTTATGCGTCAATTCTGGGTAACTGGGCTGGGGGCAATGGCTTGGATAGGGCTGGAAACGATGCAGTTAACGGGTTTGGTTGTAGTTCTGTTCAGGGAAATAGAATCCTTGGCAATGCAACTCCTAGTGATCAGGTAGGCAGTACTGTTGCAACTGGGTTTGGTAATAGCCCCACACAGTTGAATGGGGCTGATCTTGCGAGTGATGAGGGTGGGGATGACTCCGTGTCGGGGAGAAAAGTGAAGTTTTTATGCAGTTATGGTGGGAAGATTATACCTAGACCTAGTGATGGGATGTTGAGATATGTTGGAGGGCAGACAAGAATAATTAGTGTCAAGAGAGATGTGAGTTTCAACGAACTGATGCAAAAGATGGTTGATACATATGGTCAACCTGTGGTTGTCAAGTATCAGCTCCCTGAAGAGGATCTTGATGCATTGGTCTCAGTTTCTTCCCCGGATGATCTTGAGAATATGATGGACGAGTATGAAAAATTGATTGGAAGATCTTCAGATGGCTCGGCTAAGCTAAGGATTTTTCTGTTTTCTGCATCAGAAATTGATCCTTCTGGTGGGGTGCCGTTAGTAGATTTAAATGATAGTGGGCAGAGATATGTTGAGGCTGTGAATGGAATTGCAGATGGAATCAACTGTCGGCTTATGAGAAAAGGGAGTATCACAAGTGCTGCTTCAACCCAAAATTCAGATTTTAGTGTGACGGAGGCTCTTGATAGTTCTGTTGCTGGTCCAGCCGAGGTAAGTGTAGGACCATCAACTTGCATGTTATCTCCCAGAGACAATTTGGCAGCTTCTCATGACACTGCTGCAAAGTTGGCGGTGGCAGATCAAAGTCCAAGAGTATACTCAGATGCTTCTGCAGTTCCTATGGTTGCGCCAGTTGCTACATCTGGTCCAGCCCAGACTTCAGCTTTCCAGAATGAGGTTGAACTAGAAAAGTCTGTGCCTTTTACTTTACAGCAACAGCAATTTGGAGTACCGCAATCGGGAGTGGACATTTCACCTCCTGCACCTTATGTGCATCCTTTTGTTGACTCACGTTTGGAAGTTATGAATCATGCAGATTATGTCCCACTGCCTCCTCAGGCAGGGTTCCCAAATTCTCAACTTTTAGCAAAACATGGGCCTGCCTTCAGTCCAACACAATTCCAAGATAATATCCCATCTTTTGTTCCCCACCAGTTCATCCCTGCAGTGCCGATGACAATGACACCATCAGCTTCTCATGTTAGTGTAAGACCAAACGTTTGTCAACCATTGATGCAACCCCAGCAAACTCGTTTGGACCAATATAGTGATGAAAGCACATCAGGGCCAAAGATCATCCAGCTTCCTGTTGAACAAAACTACAGTGCTTACCCAGTTCAAGTTCCTTCTGTTGTGGTTCCTGGTAATTATGGTTGGGTTCAGGTTCCTCCACAGGAGAATGTTATTCTGTCTGATGGGTTGTTACCTCAACAACAAGTGAGAATCCCTGGGAAATTCCAGAAAGAGGAAGACTGTTATATGTGTCAGAAATTATTGCCTCATGCACATTCAGATCCTGTGGTTCAGGATCAGCGGGATACTGTTGCAAGTTCAATTTCTGATTCGATCCTAAGCTATTATAGTCTCCCTATGGAGGAAAACTTACAAGCTCAAGGGACAAACAGGGTGATGGTGACTGCACCCTTGAAGGATGGTGCTATTGAACAAGGGATTGACACCAAATCCAGAGTTGTTAGCAAAGTGGAATCTCCTGTTGGAATACCTTGCACTGATGCAGCAGGCCTTTCTTATAAGCTTGAGTCACAGCCTGAGGGGGAGAGGAATGTTATACTAAAGCCTGATGCCTTTGATCATTTGAGGAGTCCCATTATCGCTGATGTGATTGGAATGGCAGGAGATAGCCAGTCACCAACTGATGGGTTAACGGGGACAGCACCACTGTCTTGCCTAGATGATGTTGGCCAACAAACGATGCCACTTGAAAACTGGGTCAAGCAGGATGTGCTCTTGAATAAGCCTGTTTATAGCGATACAACTCCTGCTAAAGAGTCCCCTAATGAGCATACAAATGAATTTGTTAACTTGGTCTCCCAGCCGGTGGAATGTAGTCAAATGGCACAGACACCTGTCTGGGACATTCCTGGATCAAATTCTCAGTCAAAAAGTGGAAACCTCCTCAAGGATGATAATCTTCCATCTTTAATATCTCCGTCAGTCAGGTCTGGAGATTTGCATAATTCTTCAAACTCACTTTTCAGTAATCAGGATCCCTGGAATGCACACCACAGTACGTACTTTCCTCCTCCAAGACCTAAAAAAGTTCCGTCAAAGAAAGAAATACATTCTTCTAAGGATCACTTTGGTGAGGAATTGACTGGCGACTCTGGTGAACAAAATTTAGAAGCTCAATTGGAGGATAGTCTTTACCAGCCATTCAAACAGAGTTTATATGTCGAACATGGCTATTCAGCCCAGGGCTCAGTTGAAGATCAGATAAAACAAGACCTTCAAGCTGTTGCTGAGGGTGTAGCTGCTTCTGTTCTGCACCCAAGCACTCCTAGTCCTGATTTACATGGTAGAGATGTGTCCAGTCAGGAAGACGTTGGAGATTTTGATAATCTAAATAGAGCTAAAGCTTTGGATGTCAAGAGCAAGCTTCCAGAAAAGCCAAATTTTAGCTTTCCTTTATCAGAAGGTCTTGGAGGACTGCAGATTATAAAGAATTGTGACCTTGAAGAGCTGAGAGAACTTGGTTCAGGTACCTTTGGGACTGTATATCATGGAAAATGGCGGGGCACTGATGTGGCAATCAAGCGTATTAATGATAGGTGCTTTGCTGGAAAGCCTTCCGAGCAAGAGCGCATGAGAGCGGATTTCTGGAATGAAGCAATCAAACTCGCTGACTTGCACCATCCAAATGTTGTAGCATTCTATGGTGTTGTGCTTGATGGCCCAGGAGGTTCTGTGGCAACAGTAACAGAGTTTATGGTCAATGGTTCTCTAAGAAATGCCTTGCAGAAAAGTGAGAGGAATCTTGACAAGCGCAAGCGTGTTTTGATTGCATTGGATGTGGCATTTGGTATGGAATACCTGCATGGGAAAAATATTGTACACTTTGACTTGAAAAGTGACAACTTGCTAGTGAATCTCAGAGATCCACATCGCCCAATATGCAAGGTTGGTGATTTGGGTCTATCTAAGGTGAAATGTCAGACACTGATCTCTGGTGGTGTGCGAGGGACACTACCTTGGATGGCTCCTGAACTACTGAACGGAAGCAGTAGCCTTGTTTCTGAGAAGGTTGATGTGTTTTCGTTTGGCATTGTGATGTGGGAAATCCTTACGGGAGAGGAGCCATATGCCGATTTGCACTACGGTGCAATTATAGGGGGTATTGTGAGCAATACTTTGCGACCTCCGATTCCAGATTCTTATGATCCAGATTGGAAATTGCTAATGGAGCGTTGTTGGTCATCAGAGCCATCGGAGAGGCCAAGCTTTACTGAGATCGCAAATGAACTACGCTCTATGGCATCCAAGATTCCTCCCAAAGGACAAGCTCAACAGCAGCAACCCTCTGTATTGCAGGCTCAAGCACCAAAATGA 3957 0.4524 MAFDPNSVPKDLRPLNVARTDEPLIVPATTMAREIGSQGNMSIFYPAPVADAGHVGVGYGTMSSGPASWCVRPGVSVVHTALDPTVGYGCSPSYGNRISGGNAVDLSSSVVANGPGYASILGNWAGGNGLDRAGNDAVNGFGCSSVQGNRILGNATPSDQVGSTVATGFGNSPTQLNGADLASDEGGDDSVSGRKVKFLCSYGGKIIPRPSDGMLRYVGGQTRIISVKRDVSFNELMQKMVDTYGQPVVVKYQLPEEDLDALVSVSSPDDLENMMDEYEKLIGRSSDGSAKLRIFLFSASEIDPSGGVPLVDLNDSGQRYVEAVNGIADGINCRLMRKGSITSAASTQNSDFSVTEALDSSVAGPAEVSVGPSTCMLSPRDNLAASHDTAAKLAVADQSPRVYSDASAVPMVAPVATSGPAQTSAFQNEVELEKSVPFTLQQQQFGVPQSGVDISPPAPYVHPFVDSRLEVMNHADYVPLPPQAGFPNSQLLAKHGPAFSPTQFQDNIPSFVPHQFIPAVPMTMTPSASHVSVRPNVCQPLMQPQQTRLDQYSDESTSGPKIIQLPVEQNYSAYPVQVPSVVVPGNYGWVQVPPQENVILSDGLLPQQQVRIPGKFQKEEDCYMCQKLLPHAHSDPVVQDQRDTVASSISDSILSYYSLPMEENLQAQGTNRVMVTAPLKDGAIEQGIDTKSRVVSKVESPVGIPCTDAAGLSYKLESQPEGERNVILKPDAFDHLRSPIIADVIGMAGDSQSPTDGLTGTAPLSCLDDVGQQTMPLENWVKQDVLLNKPVYSDTTPAKESPNEHTNEFVNLVSQPVECSQMAQTPVWDIPGSNSQSKSGNLLKDDNLPSLISPSVRSGDLHNSSNSLFSNQDPWNAHHSTYFPPPRPKKVPSKKEIHSSKDHFGEELTGDSGEQNLEAQLEDSLYQPFKQSLYVEHGYSAQGSVEDQIKQDLQAVAEGVAASVLHPSTPSPDLHGRDVSSQEDVGDFDNLNRAKALDVKSKLPEKPNFSFPLSEGLGGLQIIKNCDLEELRELGSGTFGTVYHGKWRGTDVAIKRINDRCFAGKPSEQERMRADFWNEAIKLADLHHPNVVAFYGVVLDGPGGSVATVTEFMVNGSLRNALQKSERNLDKRKRVLIALDVAFGMEYLHGKNIVHFDLKSDNLLVNLRDPHRPICKVGDLGLSKVKCQTLISGGVRGTLPWMAPELLNGSSSLVSEKVDVFSFGIVMWEILTGEEPYADLHYGAIIGGIVSNTLRPPIPDSYDPDWKLLMERCWSSEPSERPSFTEIANELRSMASKIPPKGQAQQQQPSVLQAQAPK 1318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1482 1318 SMART serkin_6 1028 1294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g1482 1318 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 215 299 - -
Acco04g1482 1318 SMART PB1_new 210 299 IPR000270 GO:0005515
Acco04g1482 1318 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1116 1308 - -
Acco04g1482 1318 Pfam PB1 domain 215 298 IPR000270 GO:0005515
Acco04g1482 1318 ProSiteProfiles Protein kinase domain profile. 1028 1295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g1482 1318 MobiDBLite consensus disorder prediction 827 911 - -
Acco04g1482 1318 PANTHER SERINE-THREONINE PROTEIN KINASE 237 1293 - -
Acco04g1482 1318 Gene3D Transferase(Phosphotransferase) domain 1 1116 1317 - -
Acco04g1482 1318 Gene3D - 216 299 - -
Acco04g1482 1318 PRINTS Tyrosine kinase catalytic domain signature 1218 1240 IPR001245 GO:0004672|GO:0006468
Acco04g1482 1318 PRINTS Tyrosine kinase catalytic domain signature 1147 1165 IPR001245 GO:0004672|GO:0006468
Acco04g1482 1318 PRINTS Tyrosine kinase catalytic domain signature 1110 1123 IPR001245 GO:0004672|GO:0006468
Acco04g1482 1318 PRINTS Tyrosine kinase catalytic domain signature 1262 1284 IPR001245 GO:0004672|GO:0006468
Acco04g1482 1318 MobiDBLite consensus disorder prediction 1295 1318 - -
Acco04g1482 1318 SUPERFAMILY CAD & PB1 domains 211 302 - -
Acco04g1482 1318 CDD PB1_UP2 199 297 - -
Acco04g1482 1318 ProSitePatterns Protein kinases ATP-binding region signature. 1034 1065 IPR017441 GO:0005524
Acco04g1482 1318 MobiDBLite consensus disorder prediction 827 878 - -
Acco04g1482 1318 MobiDBLite consensus disorder prediction 889 909 - -
Acco04g1482 1318 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1021 1115 - -
Acco04g1482 1318 MobiDBLite consensus disorder prediction 966 985 - -
Acco04g1482 1318 CDD STKc_MAP3K-like 1034 1291 - -
Acco04g1482 1318 MobiDBLite consensus disorder prediction 1299 1318 - -
Acco04g1482 1318 Pfam Protein tyrosine and serine/threonine kinase 1029 1291 IPR001245 GO:0004672|GO:0006468
Acco04g1482 1318 SUPERFAMILY Protein kinase-like (PK-like) 1022 1290 IPR011009 -
Acco04g1482 1318 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1153 1165 IPR008271 GO:0004672|GO:0006468
Acco04g1482 1318 Gene3D Phosphorylase Kinase; domain 1 1021 1115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1482 Acco-ChrAcco04 17201545 17208468 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1482 160 1309 MAP Kinase Kinase Kinase AT3G46920 46.066 0.0 884
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Acco04g1482 PK_Tyr_Ser-Thr 1.3e-58 CL0016