Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1460 ATGGCTTCCCCTCAATCCTTCCTTCTCTTCTCTGTTTTCCTTCTTCATCTTCATTTTCACTCTTCAACTTCACAAAGTTGGATCAGAGCTGGTTATTGGTATGTTGGCAGTGAAACCCCCATTCCTGACATAAACTCTGCTTTGTTCACACACCTTATATGCGCCTTCGCTACTGTCGATCCCTCCACTTACGAGATCTCCATAGCCAACTCTGACCAACAAGATTTCTCCATCTTCACCAACATCGTCAAGCGCAAAAACCCCTCGATCGTCACTCTTCTTTCTGTATGGAACGGACAGCCTGAAACTGCACAGGGTATTTTGGGCAAGAAGGTGAACGATTCGGTCATTTCTTCTATGATCAGAACCGCTTCTTCGAGAAAATCTTTCATTCAGTCCTCAATACAAACAGCTAGACGACATGGGTTTCAGGGCATTGACTTGTGTTGGCTTTGGCCTCAGGCAGAATCAGATATGACGAACTTGGGAACTCTGCTTCACGAATGGCGACGTGCTGTGGATTCTGAGACCGGAAGCTCTGGGGAATCGTCGTTGATGTTGAGTATGGGTCTTCATTACACGCCCATTGTCTTTGGGAATTTGAGTTACCCTGTTGATTCTTTGGCGAAGAATTTAAACTGGGGTCATATTCTGGCTTATGATTACCATCTTCCTTCACTGGAGAATTTCACACATCCTCATGCTGCTCTGTATGATCCTGTGAGTCATGTGAATACTGATTTTGGTATTAGGAAGTGGTTGAGCATAGGGTTTCCTTCTAACAAGCTGCTTCTGGGTTTGCCTTACCATGGCTATGCTTGGGCGTTAGATAATCCCAAGGAAAATGCCATTGGTGCTCCATCATCGGGTATGGCAGTGAAACCAGACGGGTCGTTAAACTATAAGTATATAAAGTGGTATGTTCGGAGTTATGGTGCTCCTACGTTGTATAATGCTACCTATGTGGTGAATTATTGCACCATTGGTTCTAGTTGGATCAATTTTGATGATGTTGAAGCCATCAGAACTAAGGTTGCCTATGCCAAGGAAAAGAAACTGCTGGGATACAATGTGTTTCAGGTGATAAATGATGATAATTGGGTGCTTTCTAAGGCAGCTCAAGATGAAGCAACTGATCATGGAAACAGACGGAAGCTATTACTTATTACTATTTTACTTCCCTTCTCAATGGTGATAACATTGGGAGTCATCCTTCTGTGCTGCTTAAGAAGCAATTCACTCAAATCAAAAGTCAAGATGGTGTTTGGCAAAAGTTTCCGGCCTGAACCAGAAGGTCCCATTTTAAATGCTGAGAGCCTTGAAACCAATGCTCCACATCTTGAAGAATTTAGATTTGCCATCATAAGAGCGACAACAAATGACTTTTCTGTAGAAAACAAGCTAGGAGAGGGTGGATTTGGCCCTGTGTACAAGGGAAAACTACCAGGAGGACAAGAAATTGCAGTCAAGAGACTTTCAAAAGCTTCTACTCAAGGACATGAGGAATTTACAAATGAGGTTTCGCTTACTGCAACGCTTCAGCATATCAATCTGGTTAGAGTTTTGGGATTCTGCAATGAGAGGGAAGAAAACATGCTAATCTATCAGTACATGCCTAACAGAAGCTTGGATTTCTACCTTTACGATCCAATAAGGAAGCGACTATTGGATTGGGGCAAGCGTGTTCATATTATTGAAGGAATTATCCAAGGACTTCTATATCTCCAAGAATATTCAAACGTCACAATAATACATCGAGATTTAAAAGCCAGCAACATCTTGCTCGATGATAAAATGGATCCAAAAATATCCAATTTTGGAATGGCTAAACTTTTTAGAAAAGATGAAGTTGAAGCAAATACTGAGCGAATTGTCGGAACATATGGTTATGTTCCTCCAGAATATGTTAGGAAAGGCACATACTCAATGAAGTATGATGTTTATAGCTTTGGAGTACTACTTTTGCAAATCATTAGTGGCAAGAGGAACAATTGCTATTATGGCACTGATGAGAACTTGAGCATTCTTGAATATGCCTATAATTTGTGGAAAGATGGTAAAGGTTTGGAATTTGTTGATCCATTTCTAGAAGATTCATCTTCTTCCTGCAAACTTCTGCAATGTCTGCATGTAGCCCTACTCTGTGTGCAGGAAAATCCAGTGGAAAGGCCATCAATGCTAGAGGTTTCTTCCATGCTGAAGAATGAAACTACGGCAATTCCGTTGCCTAAAAGGCCAGCTTTCTCAACAAAAAGTGATGAAAAATTAGAAGACAGATCCTCAACAACATCACAGTCACAGCAAGCAAGTTACTCTATAAATGATGCTTCAATTTCCCAAATAACACCCAGATAA 2355 0.4119 MASPQSFLLFSVFLLHLHFHSSTSQSWIRAGYWYVGSETPIPDINSALFTHLICAFATVDPSTYEISIANSDQQDFSIFTNIVKRKNPSIVTLLSVWNGQPETAQGILGKKVNDSVISSMIRTASSRKSFIQSSIQTARRHGFQGIDLCWLWPQAESDMTNLGTLLHEWRRAVDSETGSSGESSLMLSMGLHYTPIVFGNLSYPVDSLAKNLNWGHILAYDYHLPSLENFTHPHAALYDPVSHVNTDFGIRKWLSIGFPSNKLLLGLPYHGYAWALDNPKENAIGAPSSGMAVKPDGSLNYKYIKWYVRSYGAPTLYNATYVVNYCTIGSSWINFDDVEAIRTKVAYAKEKKLLGYNVFQVINDDNWVLSKAAQDEATDHGNRRKLLLITILLPFSMVITLGVILLCCLRSNSLKSKVKMVFGKSFRPEPEGPILNAESLETNAPHLEEFRFAIIRATTNDFSVENKLGEGGFGPVYKGKLPGGQEIAVKRLSKASTQGHEEFTNEVSLTATLQHINLVRVLGFCNEREENMLIYQYMPNRSLDFYLYDPIRKRLLDWGKRVHIIEGIIQGLLYLQEYSNVTIIHRDLKASNILLDDKMDPKISNFGMAKLFRKDEVEANTERIVGTYGYVPPEYVRKGTYSMKYDVYSFGVLLLQIISGKRNNCYYGTDENLSILEYAYNLWKDGKGLEFVDPFLEDSSSSCKLLQCLHVALLCVQENPVERPSMLEVSSMLKNETTAIPLPKRPAFSTKSDEKLEDRSSTTSQSQQASYSINDASISQITPR 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1460 784 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 27 380 IPR001223 GO:0005975
Acco04g1460 784 Pfam Protein kinase domain 463 729 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g1460 784 Pfam Glycosyl hydrolases family 18 31 361 IPR001223 GO:0005975
Acco04g1460 784 Gene3D Glycosidases 43 366 - -
Acco04g1460 784 Gene3D - 269 335 IPR029070 -
Acco04g1460 784 Gene3D Phosphorylase Kinase; domain 1 436 537 - -
Acco04g1460 784 MobiDBLite consensus disorder prediction 761 784 - -
Acco04g1460 784 SUPERFAMILY Chitinase insertion domain 270 335 IPR029070 -
Acco04g1460 784 SMART serkin_6 462 740 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g1460 784 FunFam Uncharacterized protein 437 537 - -
Acco04g1460 784 MobiDBLite consensus disorder prediction 741 784 - -
Acco04g1460 784 SUPERFAMILY Protein kinase-like (PK-like) 447 762 IPR011009 -
Acco04g1460 784 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 361 781 - -
Acco04g1460 784 Gene3D Transferase(Phosphotransferase) domain 1 538 742 - -
Acco04g1460 784 CDD GH18_plant_chitinase_class_V 25 370 - -
Acco04g1460 784 ProSitePatterns Serine/Threonine protein kinases active-site signature. 583 595 IPR008271 GO:0004672|GO:0006468
Acco04g1460 784 SMART 2g34 27 364 IPR011583 GO:0008061
Acco04g1460 784 ProSiteProfiles Protein kinase domain profile. 462 748 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g1460 784 SUPERFAMILY (Trans)glycosidases 28 377 IPR017853 -
Acco04g1460 784 FunFam Chitotriosidase-1 269 335 - -
Acco04g1460 784 FunFam Uncharacterized protein 538 742 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1460 Acco-ChrAcco04 16878676 16889151 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1460 449 784 Receptor kinase-like Gene Family AT4G23150 52.507 1.33e-121 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco04g1460 Glyco_hydro_18 1.7e-57 CL0058