Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1454 ATGATGTCCAGAACAGCAGTAGTTCTTTTGCTTGTTTCTCTCTATCTTCTTCCATTTCAATGTGCAGCAGAACAGCAACTTGAGGTGACAGCTGCTTACTGGACGAGGCGTGGCATTTCCATTTCTGAAATCGACCCCACACTATTCACTCACCTCATATTTGATCGAGCTTATGTCGACCCTAAATCCTTCGAGATCTTAATCCTTCCATCAGATAAGCTGGACTTTGAAGAATTCTCCTACAATGTCAAAGAAAATAACCCATTCATGAAAACACTTCTAACTATTTGGGGAAAAGACGGGGATACATATGCCGCCATGGTGAAAAATTCTTCTTCAATAAGTTCCTTCATCCAATCTTCACAAAGAAAAGCCAGGGCATATCGATTTGATGGCGTCGACCTTTACTGGGATTACCCGACACAAATAATGATATGGAAGCAAGATGGTTTTGGGGCTGCCATTTTTGGGTATGCATGGAATCTAAGTGATCCGAATAACAATGCAATAGGATATGACGATGTTGATACAATCAAAACTAAGGTGTCCTATGCCAAGGAAAATAAGTTACGCGGTCACGATGCATATCAAGTTTCCTATGACGACAATTGGTTGCTTTCCCGTGCAGCTAAAGGAGAAGATAATAAAGCTGAAAATAAAGACCACAGGGCACGTTTGCTAAAGATTATCTTGGCTGCAGCTGTCATATCTGTCTTGCTATTAGGTTTCTTAGTCTGCATCCTAAAGAGAAGAATGTTCAAGTTAAAAGGTAAAGATGATGCAGAAGATTTGAATGCTAATGCTCCGCATGTTAAATTCTTTTCTTTCTCTGCCATCGAAAGGGCCACAAATCAATTCTCAATTGAAAATAAGATTGGAGAAGGTGGTTTTGGAATTGTTTACAAGGTTATATTACCTGATGGTGAGGAAATAGCAGTGAAAAGACGATCAAAAGGATCCAAGCAAGGATTTAAGGAATTAAAAAATGAGATAACACTCAATGCAAAACTACAACATGTCAATCTTGTTCAACTATTAGGATACTGCAACGACAGGGAAGAACAAATGTTGGTTTATGAGTACATGCCAAACAAAAGTCTTGACTTTTATCTCTTTGACCCTACAAAGAAAAATCTTCTGGATTGGGAAAAGCGTGTTTGTATAATTGAAGGAGTTACTCAAGGGCTTATCTACCTTCAAGAATATTCTAGATTGACAATAATTCATAGAGACTTGAAGGCTAGTAATATTTTATTGGACCATGAGATGAAGCCAAAGATTTCAGACTTTGGCATGGCAAGACCATTCAACAAACATGAACGTGAAGAAAGCGCTAGCAAACTTGTAGGGACATATGGCTATATACCTCCTGAGTATGTTGAGAGAGGATTGTGTTCCATTAAATCTGATGTTTACAGTTTTGGTATCATCCTCCTACAAATTATCAGTGGTAAAAAGATCTCAAGCTTATATGGAGAGAGCAATGATTTGAACCTCTTAGAATATGCATATGTGTTATGGAAAGAAGGGAAAGGCATGGAATTCATGGATTCTGCACTTGATGATACATCCTCTGAATGCAAATTGATCAGATTCTTGGAAATTGCTCTCCTCTGTGTCCAAAAAAATGCAGAAGATAGGCCATGCATGTTAGAAGTAGGCTCAATGCTAAGAATCAAAAGCAACTTCATAGCAATCCCAAAACAACCAGCATATTCAAAGGTAGGAAATGAAGAGGCAATGACGTTTATTCAGCAGCCAGAAATTTGCTCACGAAACGAAACAACTATATCTCCAGTTTGGGGTCGGTAG 1812 0.3852 MMSRTAVVLLLVSLYLLPFQCAAEQQLEVTAAYWTRRGISISEIDPTLFTHLIFDRAYVDPKSFEILILPSDKLDFEEFSYNVKENNPFMKTLLTIWGKDGDTYAAMVKNSSSISSFIQSSQRKARAYRFDGVDLYWDYPTQIMIWKQDGFGAAIFGYAWNLSDPNNNAIGYDDVDTIKTKVSYAKENKLRGHDAYQVSYDDNWLLSRAAKGEDNKAENKDHRARLLKIILAAAVISVLLLGFLVCILKRRMFKLKGKDDAEDLNANAPHVKFFSFSAIERATNQFSIENKIGEGGFGIVYKVILPDGEEIAVKRRSKGSKQGFKELKNEITLNAKLQHVNLVQLLGYCNDREEQMLVYEYMPNKSLDFYLFDPTKKNLLDWEKRVCIIEGVTQGLIYLQEYSRLTIIHRDLKASNILLDHEMKPKISDFGMARPFNKHEREESASKLVGTYGYIPPEYVERGLCSIKSDVYSFGIILLQIISGKKISSLYGESNDLNLLEYAYVLWKEGKGMEFMDSALDDTSSECKLIRFLEIALLCVQKNAEDRPCMLEVGSMLRIKSNFIAIPKQPAYSKVGNEEAMTFIQQPEICSRNETTISPVWGR 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1454 603 Gene3D Glycosidases 44 142 - -
Acco04g1454 603 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 28 140 IPR001223 GO:0005975
Acco04g1454 603 SUPERFAMILY Protein kinase-like (PK-like) 270 577 IPR011009 -
Acco04g1454 603 ProSiteProfiles Protein kinase domain profile. 286 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g1454 603 Gene3D Transferase(Phosphotransferase) domain 1 362 567 - -
Acco04g1454 603 Gene3D Glycosidases 174 202 - -
Acco04g1454 603 SMART serkin_6 286 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g1454 603 SMART 2g34 28 201 IPR011583 GO:0008061
Acco04g1454 603 Pfam Protein kinase domain 287 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g1454 603 Gene3D - 159 173 IPR029070 -
Acco04g1454 603 ProSitePatterns Protein kinases ATP-binding region signature. 292 314 IPR017441 GO:0005524
Acco04g1454 603 SUPERFAMILY (Trans)glycosidases 33 204 IPR017853 -
Acco04g1454 603 Pfam Glycosyl hydrolases family 18 30 142 IPR001223 GO:0005975
Acco04g1454 603 ProSitePatterns Serine/Threonine protein kinases active-site signature. 407 419 IPR008271 GO:0004672|GO:0006468
Acco04g1454 603 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 191 598 - -
Acco04g1454 603 FunFam Putative LRR receptor-like serine/threonine-protein kinase 262 361 - -
Acco04g1454 603 Gene3D Phosphorylase Kinase; domain 1 249 361 - -
Acco04g1454 603 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 362 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1454 Acco-ChrAcco04 16805766 16809451 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1454 215 572 Receptor kinase-like Gene Family AT4G05200 48.485 2.15e-106 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco04g1454 Pkinase 2.8e-44 CL0016