Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco04g1453 ATGATGTCAAGAACAGCATTAGTTATTTTGCTTGTTTCTCTTTATCTTCTTCCATTTCAATGTGCAGCAGAACAGCAACTTGAGGTGAGAGCTGCTTACTGGACGAGGGGTGGCATTTCCATTTCTGAAATCGACCCCACACTATTCACTCACCTCATATTTGATCGAGCTTATGTCAACCCTAAATCCTTCGAGATCTCAATCCTTCCACCAGATGAGCAGGACATTGAAGCATTCTCCCTCAAAGTAAAAGAAAATAACCCATCCATCAAAACACTTCTAACTATTTGGGGAAAAGACAGGGATACATATGCCGCCATGGTGAAAAATTCTTCTTCAGTAAATTCCTTCATCCAATCTTCACAAAGAAAAGCCAGGAAATATCAATTTGATGGCGTCGACCTTTACTGGGATTACCCTATTATGAAAAAAGATATGGATGGTATGTCAAGTCTTTTACAGGAGTGGCGTTCATATATAGATACTAATGATCCAGATCTGCTCTTAACAGCCACCGTTCCATATTCCCCATATTGGCCATTTAATAACTTTATTTATCCTATTGACTCAATGGCAACAAGCTTGGACTGGGTACATCTTAAAACTTTTTCTTACCTCATTGATTTGACGTCATTTGTCACAGCCGCACATTCAGCTTTATATGACCCTTCAGGTATATATAGCACAGACATTGGGATTAAACACTGGATTCACGGGGGTTTGAGGCCTACCAAGATGGTTTTGGGGCTGGCGTTTTTTGGGTATGCATGGAATCTAAGTGATCCGAATAACAATGCAATAGGTGCGTCTGCGACGGGTACCGCCCAAACTAAACATGGATTGGGGATGATGACATACAAGGAAATCAAAGATCAAATTCAATCATGTCCCGGCAACATAAAATACAATCATACATATGAAATCTACACCTGGTCATGTGGATCAACTTGGATAGGGTATGACGATGTTGATACAATCAAAACGAAGGTGTCTTATGCCAAGGAAAATAAGTTGCGCGGTTACGTTGTAAATCAAGTTTCTTATGACGACAATTGGTTGCTTTCCCGTGCAGCTAAAGGAGAAGAACACAAAGACCACAGGGCACGTTTGCTACAGATTATCTTGGCTGCAGCTGTCATATCTGTCTTGCTATTAGGTTTCTTGGTCTACATTCTAAAGAGAAGAATGTTCAAATTAAAAGGTAAAGAAGATGCAGAAGATTTGAATGCTAATCCTCCGGATGGTATATTACCTGATGGTGAGGAAATAGCAGTGAAAAGACGATCAAAAGGATCCAAACAAGGATTTAAGGAATTAAAAAATGAGACAACACTCAATGCAAAACTGCAACATGTCAATCTTGTTCGACTATTGGGATACAGCAACGACAGGGAAGAACAAATGTTGGTTTATGAGTACATGCCAAACAAAAGTCTTGACTTTTATCTCTTTGACCCTACAAAGAAACATCTTCTGGATTGGGAACAACGTGTTTGTATCATTGAAGGAGTTACTCAAGGGCTTATCTACCTTCAAGAATATTCTAGATTGACAATAATTCATAGAGACTTAAAAGCTAGCAATATTTTATTGGATCATGAGATGAAGCCAAAGATTTCAGACTTTGGCATGGCAAGACCTTTCAACAAACATGAACGTGAAGAAAGAGGCAGCAAACTTGTAGGGACATATGGCTATATACCTCCTGAGTATGTTGAGAGAGGATTGTGTTCCATTAAATCTGATGTTTACAGTTTTGGTATCATCCTCCTACAAATTATCAGTGGTAAAAAGATCTCAAGCTTATATGGAGAGAGCAATGATTTGAACCTCTTAGAATATGCATACATGCTATGGAAAGAAGGGAAAGGCATGGAATTCATGGATTCTGCACTTGATGATACATCCTCTGAATGCAAATTGATCAGATTCTTGGAAATTGCTCTCCTCTGTGTCCAAAAAAATGCAGAAGATAGGCCATGTATGTTAGAAGTAGGCTCAATGATAAGAAACAAAAGCAACTTCATAGCAATCCCAAAACAACCAGCATATTCAAAGATAAGAAATGAAGAGGCATTGAAGTTTATTCAGCAGCCAGAAATTTGCTCTCGAAATGAAACAACAATATCTCCAGTTTGGGGTCGATAG 2148 0.3883 MMSRTALVILLVSLYLLPFQCAAEQQLEVRAAYWTRGGISISEIDPTLFTHLIFDRAYVNPKSFEISILPPDEQDIEAFSLKVKENNPSIKTLLTIWGKDRDTYAAMVKNSSSVNSFIQSSQRKARKYQFDGVDLYWDYPIMKKDMDGMSSLLQEWRSYIDTNDPDLLLTATVPYSPYWPFNNFIYPIDSMATSLDWVHLKTFSYLIDLTSFVTAAHSALYDPSGIYSTDIGIKHWIHGGLRPTKMVLGLAFFGYAWNLSDPNNNAIGASATGTAQTKHGLGMMTYKEIKDQIQSCPGNIKYNHTYEIYTWSCGSTWIGYDDVDTIKTKVSYAKENKLRGYVVNQVSYDDNWLLSRAAKGEEHKDHRARLLQIILAAAVISVLLLGFLVYILKRRMFKLKGKEDAEDLNANPPDGILPDGEEIAVKRRSKGSKQGFKELKNETTLNAKLQHVNLVRLLGYSNDREEQMLVYEYMPNKSLDFYLFDPTKKHLLDWEQRVCIIEGVTQGLIYLQEYSRLTIIHRDLKASNILLDHEMKPKISDFGMARPFNKHEREERGSKLVGTYGYIPPEYVERGLCSIKSDVYSFGIILLQIISGKKISSLYGESNDLNLLEYAYMLWKEGKGMEFMDSALDDTSSECKLIRFLEIALLCVQKNAEDRPCMLEVGSMIRNKSNFIAIPKQPAYSKIRNEEALKFIQQPEICSRNETTISPVWGR 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco04g1453 715 SUPERFAMILY Protein kinase-like (PK-like) 418 690 IPR011009 -
Acco04g1453 715 Gene3D Transferase(Phosphotransferase) domain 1 475 682 - -
Acco04g1453 715 Pfam Protein tyrosine and serine/threonine kinase 421 665 IPR001245 GO:0004672|GO:0006468
Acco04g1453 715 Pfam Glycosyl hydrolases family 18 32 349 IPR001223 GO:0005975
Acco04g1453 715 SUPERFAMILY (Trans)glycosidases 31 353 IPR017853 -
Acco04g1453 715 Gene3D Glycosidases 42 351 - -
Acco04g1453 715 PIRSF SRK 414 715 IPR024171 GO:0004674
Acco04g1453 715 PIRSF SRK 45 134 IPR024171 GO:0004674
Acco04g1453 715 PIRSF SRK 315 411 IPR024171 GO:0004674
Acco04g1453 715 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 474 677 - -
Acco04g1453 715 ProSitePatterns Serine/Threonine protein kinases active-site signature. 519 531 IPR008271 GO:0004672|GO:0006468
Acco04g1453 715 Gene3D - 252 320 IPR029070 -
Acco04g1453 715 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 415 709 - -
Acco04g1453 715 SMART serkin_6 397 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g1453 715 SMART 2g34 28 349 IPR011583 GO:0008061
Acco04g1453 715 ProSiteProfiles Protein kinase domain profile. 377 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco04g1453 715 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 28 365 IPR001223 GO:0005975
Acco04g1453 715 SUPERFAMILY Chitinase insertion domain 253 320 IPR029070 -
Acco04g1453 715 Gene3D Phosphorylase Kinase; domain 1 414 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco04g1453 Acco-ChrAcco04 16798099 16801838 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco04g1453 415 684 Receptor kinase-like Gene Family AT4G11480 51.661 8.18e-90 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco04g1453 Glyco_hydro_18 1.8e-51 CL0058